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The map label for this gene is yaaJ [C]

Identifier: 120597439

GI number: 120597439

Start: 665185

End: 666561

Strand: Direct

Name: yaaJ [C]

Synonym: Sputw3181_0608

Alternate gene names: 120597439

Gene position: 665185-666561 (Clockwise)

Preceding gene: 120597438

Following gene: 120597442

Centisome position: 14.13

GC content: 45.82

Gene sequence:

>1377_bases
ATGGAAGCAATTACGGAATTTGTTGGCCTAGTTAATGGCTTTGTCTGGGGCACACCTATGTTGGTGATGATCCTTGGTGT
GGGTTTGTTTCTCTCTCTCGGGCTTAGATTGATGCCCATTCTTAAATTAGGTACAGGTTTTAAGCTACTCTGGTCTGGGC
GAATTCCCGATAAAGATAAAAATGTGAAAGGAGATGTGAGCCCTTTTAATGCGTTGATGACGTCACTTTCAGCCACTATT
GGTACAGGTAATATTGCGGGGGTTGCTACCGCGATTTTTATTGGAGGCCCTGGTGCCTTATTTTGGATGTGGTGTACAGC
GTTAGTGGGGATGGCAACTAAGTTTGCAGAGGCCGTTTTAGCGGTGAAATACCGTGAAGTTGATGACCATGGTAACCATG
TTGGTGGGCCTATGTATTACATCAAAAATGGCCTTGGTAAGAAGTGGGCTTGGTTAGGCACATTATTTGCGATTTTTGGT
TCTCTTGCTGGTTTTGGTATTGGTAATACAGTACAGGCAAACTCAGTTGCAGATGCGTTAAGCAGTAACTTTGGGATTCC
CGCTTGGGCTTCGGGCGTGGTGATGATGCTGTTAGTTGGTGCAGTATTGATGGGAGGGATTAAACGTATCGCCGATGTAG
CGGGTAAGTTAGTGCCCTTTATGACAATTTTTTATATTACCGCGGGTTTAGCTGTGTTAGCTATGCATATTGAAGAGGTG
CCTGCTGCATTTGCCTTGATTGTTCATAGTGCGTTTAATCCAGTTGCTGCCCAAGGTGGTTTTGCGGGGGCGGCAGTTTG
GGCTGCCATTCGCTTCGGTGTCGCTCGCGGTGTGTTTTCCAATGAAGCAGGTTTAGGAAGTGCGCCTATCGCCCATGCCG
CTGCGCAAACGAATAACCCTGTAGCGCAGGGGCTTGTTGCTATGCTTGGCACCTTTATCGATACCATTATTGTTTGTTCT
ATTACGGGACTAGCGATTGTGGTGTCAGGAGCATGGACTTCAGGTGAAAATGGTGCCGCATTGACTTCCTACGCCTTCTC
CCACGCCTTACCGATGGGGAATTATATTGTCGCTGTAGCTCTGGCTATTTTTGCGTTTACAACCATTATTGGTTGGAGTT
TTTATAGTGAGAAGTGTGTGCAATATCTCTTTGGTATTAAAGCAATAAAACCATTTCGCCTACTGTGGACGCTTGCGGTT
CCCTTAGGTGCGGTGAGTTCTTTAGATTTCATTTGGCTATTAGCGGATACCTTAAACGCTATGATGGCTATTCCGAACCT
TATTGCTTTAGTGCTGTTGAGTCCTGTGGTTTTCGGTTTGACGCGAGAATACTTTATTAAAAAACGCGCAGAAGAGACGG
CAAAAGTGCGCACTTAA

Upstream 100 bases:

>100_bases
AGGCTATCTAGATTGGCTCATTAAATAGTCTCAATTAGGTCAAACCTAATTTTGCAGAGCTAATAAAACTATAACTATAA
CAATCAATCACGAGGTTTGA

Downstream 100 bases:

>100_bases
TTGCCGATGCGACTGAGTGTTTTCGAACCAAAAGCTCACATATTGGTGAGCTTTTTAGTCGAGTTGGTTACGCGATTAGT
CTGAGTTGTTATCAAACTCT

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MEAITEFVGLVNGFVWGTPMLVMILGVGLFLSLGLRLMPILKLGTGFKLLWSGRIPDKDKNVKGDVSPFNALMTSLSATI
GTGNIAGVATAIFIGGPGALFWMWCTALVGMATKFAEAVLAVKYREVDDHGNHVGGPMYYIKNGLGKKWAWLGTLFAIFG
SLAGFGIGNTVQANSVADALSSNFGIPAWASGVVMMLLVGAVLMGGIKRIADVAGKLVPFMTIFYITAGLAVLAMHIEEV
PAAFALIVHSAFNPVAAQGGFAGAAVWAAIRFGVARGVFSNEAGLGSAPIAHAAAQTNNPVAQGLVAMLGTFIDTIIVCS
ITGLAIVVSGAWTSGENGAALTSYAFSHALPMGNYIVAVALAIFAFTTIIGWSFYSEKCVQYLFGIKAIKPFRLLWTLAV
PLGAVSSLDFIWLLADTLNAMMAIPNLIALVLLSPVVFGLTREYFIKKRAEETAKVRT

Sequences:

>Translated_458_residues
MEAITEFVGLVNGFVWGTPMLVMILGVGLFLSLGLRLMPILKLGTGFKLLWSGRIPDKDKNVKGDVSPFNALMTSLSATI
GTGNIAGVATAIFIGGPGALFWMWCTALVGMATKFAEAVLAVKYREVDDHGNHVGGPMYYIKNGLGKKWAWLGTLFAIFG
SLAGFGIGNTVQANSVADALSSNFGIPAWASGVVMMLLVGAVLMGGIKRIADVAGKLVPFMTIFYITAGLAVLAMHIEEV
PAAFALIVHSAFNPVAAQGGFAGAAVWAAIRFGVARGVFSNEAGLGSAPIAHAAAQTNNPVAQGLVAMLGTFIDTIIVCS
ITGLAIVVSGAWTSGENGAALTSYAFSHALPMGNYIVAVALAIFAFTTIIGWSFYSEKCVQYLFGIKAIKPFRLLWTLAV
PLGAVSSLDFIWLLADTLNAMMAIPNLIALVLLSPVVFGLTREYFIKKRAEETAKVRT
>Mature_458_residues
MEAITEFVGLVNGFVWGTPMLVMILGVGLFLSLGLRLMPILKLGTGFKLLWSGRIPDKDKNVKGDVSPFNALMTSLSATI
GTGNIAGVATAIFIGGPGALFWMWCTALVGMATKFAEAVLAVKYREVDDHGNHVGGPMYYIKNGLGKKWAWLGTLFAIFG
SLAGFGIGNTVQANSVADALSSNFGIPAWASGVVMMLLVGAVLMGGIKRIADVAGKLVPFMTIFYITAGLAVLAMHIEEV
PAAFALIVHSAFNPVAAQGGFAGAAVWAAIRFGVARGVFSNEAGLGSAPIAHAAAQTNNPVAQGLVAMLGTFIDTIIVCS
ITGLAIVVSGAWTSGENGAALTSYAFSHALPMGNYIVAVALAIFAFTTIIGWSFYSEKCVQYLFGIKAIKPFRLLWTLAV
PLGAVSSLDFIWLLADTLNAMMAIPNLIALVLLSPVVFGLTREYFIKKRAEETAKVRT

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=454, Percent_Identity=35.4625550660793, Blast_Score=237, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 48154; Mature: 48154

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAITEFVGLVNGFVWGTPMLVMILGVGLFLSLGLRLMPILKLGTGFKLLWSGRIPDKDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
NVKGDVSPFNALMTSLSATIGTGNIAGVATAIFIGGPGALFWMWCTALVGMATKFAEAVL
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHH
AVKYREVDDHGNHVGGPMYYIKNGLGKKWAWLGTLFAIFGSLAGFGIGNTVQANSVADAL
HHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
SSNFGIPAWASGVVMMLLVGAVLMGGIKRIADVAGKLVPFMTIFYITAGLAVLAMHIEEV
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PAAFALIVHSAFNPVAAQGGFAGAAVWAAIRFGVARGVFSNEAGLGSAPIAHAAAQTNNP
HHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCH
VAQGLVAMLGTFIDTIIVCSITGLAIVVSGAWTSGENGAALTSYAFSHALPMGNYIVAVA
HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
LAIFAFTTIIGWSFYSEKCVQYLFGIKAIKPFRLLWTLAVPLGAVSSLDFIWLLADTLNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MMAIPNLIALVLLSPVVFGLTREYFIKKRAEETAKVRT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]