BacMap

Definition	Shewanella sp. W3-18-1 chromosome, complete genome.
Accession	NC_008750
Length	4,708,380

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The map label for this gene is rhlB [H]

Identifier: 120597338

GI number: 120597338

Start: 545183

End: 546502

Strand: Direct

Name: rhlB [H]

Synonym: Sputw3181_0507

Alternate gene names: 120597338

Gene position: 545183-546502 (Clockwise)

Preceding gene: 120597335

Following gene: 120597339

Centisome position: 11.58

GC content: 44.7

Gene sequence:

>1320_bases
ATGAGCGAAACACATTTATCTACCCAAAAATTTGCCGACCTTCCTCTACATCCAGAGGTAAAACAGGCTCTTGCAGAGAA
CGGTTTTGAATTTTGTACGCCGATTCAGGCGTTATCATTACCCGTATTACTTCAATCAAAAGATATCGCTGGTCAGGCTC
AAACGGGCACTGGCAAGACGATGGCTTTTTTGGTTGCTACATTTAATCATTTATTATCGACGCCAATACCAGAAGGCCGT
CAGATAAATCAACCCCGTGCCATTATCATGGCACCCACTCGTGAATTGGCTATTCAAATTGCTAAAGATGCGATTTTATT
GGCTAAACATACCCGCTTAAAAGTGGGAATTGTTTACGGTGGTGAAAGCTATGATGTACAACGCAAAGTATTAGATCAAG
GTGTTGATATCTTGATTGGTACTACTGGGCGCATCATCGATTATGTGCGTCAGGGCATTATCAGCTTAACGGCTATTCAA
GCTGTCGTATTAGATGAAGCGGATCGCATGTTCGATTTGGGCTTTATCAAGGATATCCGTTTCCTATTTAGGCGTATGCC
TGATGCCAATCAACGGCTCAATATGCTGTTCTCGGCAACCCTCTCGATGAAGGTGCAAGAACTGGCCTATGATCATATGA
ATGATCCGGTCAAAGTGGATATTGCGCCCGACGAAAAAACCTCTAAGAACATTAAAGAAGAAGTTTTTTATCCTTCCCAA
GAAGATAAAATGCGCTTGTTGCTGACCTTAATTGAAGAAGATTGGCCTGAAAAAGCCATTGTATTTTCAAACACTAAGCA
TAGCTGCGAAAATTTATGGTCTTGGCTCGAAGGAGATGGTCATCGCGTTGGATTGTTAACAGGTGATGTTCCTCAGAAAA
AGCGTATTCGCATTCTGGAGCAATTTACTAGTGGCCAATTGGATATCCTAGTCGCGACAGACGTTGCTGCGCGTGGCTTA
CATATTTCTGATGTATCCCATGTTTACAACTATGACTTACCTGACGATTGTGAAGACTATGTACACCGAATTGGTCGAAC
AGGACGCGCGGGTAATAAAGGGGTTTCCATCAGCTTTGCCTGTGAAGAATATGCGCTGAACTTGCCGGCAATCGAAAGTT
ATATCAATCACTCCATCCCTGTGAGTAATTATGATAGCTCGGCATTGTTAGAGGATATTCCTGCGCCAGTTAAGATCCCG
CGTAAACATCCTGCGGGTACGCGTAACCTACGCGAGCGTGCAGGAGCTGGTCGTCCACAGGGCGCCCATCGTAGTGGTGG
ACGTCCACCTCGCCATGACAGGACACGTAGACACTCGTAA

Upstream 100 bases:

>100_bases
TATTGGGGGTGAAAAATAGCTTTTCAAGTTACCTTTTTACAATGTGGCTATTTCAAACGATCGAGTATCTTATTGCAACC
CCAAATGGTATGCTTGCGCT

Downstream 100 bases:

>100_bases
ATGCCAACACCCGCTTATGCCGCAATTACGTTAGGCTCTAATAGCTTTAATATGCTGATCGCCAAGACAAAAGGCGGTCA
GCCACATATTATTGCAAAAT

Product: ATP-dependent RNA helicase RhlB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MSETHLSTQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSTPIPEGR
QINQPRAIIMAPTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIISLTAIQ
AVVLDEADRMFDLGFIKDIRFLFRRMPDANQRLNMLFSATLSMKVQELAYDHMNDPVKVDIAPDEKTSKNIKEEVFYPSQ
EDKMRLLLTLIEEDWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTSGQLDILVATDVAARGL
HISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSISFACEEYALNLPAIESYINHSIPVSNYDSSALLEDIPAPVKIP
RKHPAGTRNLRERAGAGRPQGAHRSGGRPPRHDRTRRHS

Sequences:

>Translated_439_residues
MSETHLSTQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSTPIPEGR
QINQPRAIIMAPTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIISLTAIQ
AVVLDEADRMFDLGFIKDIRFLFRRMPDANQRLNMLFSATLSMKVQELAYDHMNDPVKVDIAPDEKTSKNIKEEVFYPSQ
EDKMRLLLTLIEEDWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTSGQLDILVATDVAARGL
HISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSISFACEEYALNLPAIESYINHSIPVSNYDSSALLEDIPAPVKIP
RKHPAGTRNLRERAGAGRPQGAHRSGGRPPRHDRTRRHS
>Mature_438_residues
SETHLSTQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSTPIPEGRQ
INQPRAIIMAPTRELAIQIAKDAILLAKHTRLKVGIVYGGESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIISLTAIQA
VVLDEADRMFDLGFIKDIRFLFRRMPDANQRLNMLFSATLSMKVQELAYDHMNDPVKVDIAPDEKTSKNIKEEVFYPSQE
DKMRLLLTLIEEDWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTSGQLDILVATDVAARGLH
ISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSISFACEEYALNLPAIESYINHSIPVSNYDSSALLEDIPAPVKIPR
KHPAGTRNLRERAGAGRPQGAHRSGGRPPRHDRTRRHS

Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=37.2282608695652, Blast_Score=239, Evalue=3e-63,
Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=37.2282608695652, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=37.2282608695652, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI41327771, Length=403, Percent_Identity=36.9727047146402, Blast_Score=238, Evalue=6e-63,
Organism=Homo sapiens, GI169881239, Length=369, Percent_Identity=36.5853658536585, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI13514809, Length=369, Percent_Identity=36.5853658536585, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI222352149, Length=370, Percent_Identity=38.9189189189189, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI148613856, Length=353, Percent_Identity=39.0934844192635, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI38201710, Length=353, Percent_Identity=39.0934844192635, Blast_Score=229, Evalue=3e-60,
Organism=Homo sapiens, GI262118318, Length=354, Percent_Identity=35.5932203389831, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI13518015, Length=354, Percent_Identity=35.5932203389831, Blast_Score=218, Evalue=6e-57,
Organism=Homo sapiens, GI262231852, Length=354, Percent_Identity=35.5932203389831, Blast_Score=218, Evalue=7e-57,
Organism=Homo sapiens, GI216548263, Length=354, Percent_Identity=35.5932203389831, Blast_Score=218, Evalue=8e-57,
Organism=Homo sapiens, GI4758138, Length=354, Percent_Identity=37.8531073446328, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI7661920, Length=373, Percent_Identity=34.5844504021448, Blast_Score=216, Evalue=5e-56,
Organism=Homo sapiens, GI21071032, Length=372, Percent_Identity=33.3333333333333, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI45446747, Length=352, Percent_Identity=35.7954545454545, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI45446743, Length=352, Percent_Identity=35.7954545454545, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI224593278, Length=357, Percent_Identity=35.5742296918768, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI55749865, Length=380, Percent_Identity=34.4736842105263, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI41327773, Length=350, Percent_Identity=36.8571428571429, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI164419743, Length=366, Percent_Identity=33.6065573770492, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI51094101, Length=366, Percent_Identity=33.6065573770492, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI50659095, Length=368, Percent_Identity=35.054347826087, Blast_Score=192, Evalue=4e-49,
Organism=Homo sapiens, GI164664518, Length=389, Percent_Identity=31.6195372750643, Blast_Score=192, Evalue=7e-49,
Organism=Homo sapiens, GI20149629, Length=374, Percent_Identity=32.0855614973262, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI41327779, Length=381, Percent_Identity=34.9081364829396, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI13129006, Length=378, Percent_Identity=33.8624338624339, Blast_Score=182, Evalue=8e-46,
Organism=Homo sapiens, GI21040371, Length=366, Percent_Identity=31.6939890710383, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI4758112, Length=366, Percent_Identity=31.1475409836066, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI18375623, Length=366, Percent_Identity=31.1475409836066, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI8922886, Length=399, Percent_Identity=32.0802005012531, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI6005743, Length=399, Percent_Identity=31.8295739348371, Blast_Score=179, Evalue=5e-45,
Organism=Homo sapiens, GI188035877, Length=347, Percent_Identity=31.4121037463977, Blast_Score=174, Evalue=2e-43,
Organism=Homo sapiens, GI83700235, Length=373, Percent_Identity=33.5120643431635, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI62241022, Length=378, Percent_Identity=32.010582010582, Blast_Score=169, Evalue=6e-42,
Organism=Homo sapiens, GI4503529, Length=373, Percent_Identity=32.9758713136729, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI38327634, Length=337, Percent_Identity=32.3442136498516, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI31542656, Length=392, Percent_Identity=31.6326530612245, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI164419732, Length=377, Percent_Identity=32.0954907161804, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI38569503, Length=379, Percent_Identity=29.5514511873351, Blast_Score=165, Evalue=8e-41,
Organism=Homo sapiens, GI17505907, Length=483, Percent_Identity=29.1925465838509, Blast_Score=165, Evalue=8e-41,
Organism=Homo sapiens, GI38569505, Length=379, Percent_Identity=29.5514511873351, Blast_Score=165, Evalue=1e-40,
Organism=Homo sapiens, GI41327776, Length=374, Percent_Identity=30.2139037433155, Blast_Score=162, Evalue=5e-40,
Organism=Homo sapiens, GI62241024, Length=357, Percent_Identity=31.9327731092437, Blast_Score=162, Evalue=7e-40,
Organism=Homo sapiens, GI13514831, Length=355, Percent_Identity=29.5774647887324, Blast_Score=159, Evalue=3e-39,
Organism=Homo sapiens, GI9506931, Length=405, Percent_Identity=29.6296296296296, Blast_Score=153, Evalue=3e-37,
Organism=Homo sapiens, GI256773275, Length=394, Percent_Identity=29.6954314720812, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI256223453, Length=400, Percent_Identity=28.5, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI9966805, Length=313, Percent_Identity=30.0319488817891, Blast_Score=137, Evalue=1e-32,
Organism=Homo sapiens, GI154759257, Length=414, Percent_Identity=27.536231884058, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=31.6568047337278, Blast_Score=132, Evalue=5e-31,
Organism=Homo sapiens, GI20336298, Length=253, Percent_Identity=32.8063241106719, Blast_Score=122, Evalue=8e-28,
Organism=Escherichia coli, GI1790214, Length=426, Percent_Identity=67.1361502347418, Blast_Score=592, Evalue=1e-170,
Organism=Escherichia coli, GI1787016, Length=371, Percent_Identity=39.622641509434, Blast_Score=272, Evalue=4e-74,
Organism=Escherichia coli, GI87082221, Length=381, Percent_Identity=38.5826771653543, Blast_Score=259, Evalue=3e-70,
Organism=Escherichia coli, GI1788930, Length=365, Percent_Identity=38.3561643835616, Blast_Score=236, Evalue=2e-63,
Organism=Escherichia coli, GI1787605, Length=351, Percent_Identity=37.037037037037, Blast_Score=216, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17510307, Length=365, Percent_Identity=40.2739726027397, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17510309, Length=365, Percent_Identity=40.2739726027397, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI71995514, Length=365, Percent_Identity=40.2739726027397, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI71995718, Length=363, Percent_Identity=39.1184573002755, Blast_Score=243, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI32565321, Length=367, Percent_Identity=37.3297002724796, Blast_Score=221, Evalue=6e-58,
Organism=Caenorhabditis elegans, GI71995724, Length=370, Percent_Identity=33.7837837837838, Blast_Score=214, Evalue=6e-56,
Organism=Caenorhabditis elegans, GI17507121, Length=370, Percent_Identity=33.7837837837838, Blast_Score=214, Evalue=7e-56,
Organism=Caenorhabditis elegans, GI17507877, Length=418, Percent_Identity=34.2105263157895, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI71987143, Length=375, Percent_Identity=35.7333333333333, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17507879, Length=378, Percent_Identity=35.1851851851852, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17552642, Length=422, Percent_Identity=34.1232227488152, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI115533224, Length=355, Percent_Identity=34.9295774647887, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI86570094, Length=345, Percent_Identity=37.3913043478261, Blast_Score=205, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI17507945, Length=338, Percent_Identity=36.094674556213, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17510559, Length=381, Percent_Identity=31.758530183727, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=34.3243243243243, Blast_Score=194, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17555296, Length=355, Percent_Identity=33.5211267605634, Blast_Score=192, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI17537549, Length=347, Percent_Identity=37.7521613832853, Blast_Score=192, Evalue=4e-49,
Organism=Caenorhabditis elegans, GI115532548, Length=431, Percent_Identity=29.9303944315545, Blast_Score=187, Evalue=6e-48,
Organism=Caenorhabditis elegans, GI115532546, Length=389, Percent_Identity=31.6195372750643, Blast_Score=187, Evalue=9e-48,
Organism=Caenorhabditis elegans, GI17509811, Length=382, Percent_Identity=31.6753926701571, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI17552114, Length=374, Percent_Identity=31.0160427807487, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI71999646, Length=398, Percent_Identity=29.8994974874372, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI71999644, Length=398, Percent_Identity=29.8994974874372, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI71982858, Length=374, Percent_Identity=29.9465240641711, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17536099, Length=414, Percent_Identity=32.1256038647343, Blast_Score=169, Evalue=4e-42,
Organism=Caenorhabditis elegans, GI17536101, Length=414, Percent_Identity=32.1256038647343, Blast_Score=168, Evalue=4e-42,
Organism=Caenorhabditis elegans, GI17536103, Length=414, Percent_Identity=32.1256038647343, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17505370, Length=353, Percent_Identity=33.1444759206799, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI193208216, Length=374, Percent_Identity=32.620320855615, Blast_Score=162, Evalue=4e-40,
Organism=Caenorhabditis elegans, GI71990816, Length=373, Percent_Identity=32.7077747989276, Blast_Score=156, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI17508543, Length=380, Percent_Identity=27.3684210526316, Blast_Score=154, Evalue=7e-38,
Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=29.8469387755102, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=29.6791443850267, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI193206561, Length=357, Percent_Identity=29.4117647058824, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI25148203, Length=412, Percent_Identity=25.4854368932039, Blast_Score=132, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI17556951, Length=411, Percent_Identity=26.7639902676399, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17553716, Length=369, Percent_Identity=28.9972899728997, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=28.1818181818182, Blast_Score=116, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI71997889, Length=499, Percent_Identity=26.25250501002, Blast_Score=101, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=29.8076923076923, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=48.4536082474227, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17557982, Length=376, Percent_Identity=22.6063829787234, Blast_Score=82, Evalue=5e-16,
Organism=Saccharomyces cerevisiae, GI6325138, Length=359, Percent_Identity=38.9972144846797, Blast_Score=250, Evalue=4e-67,
Organism=Saccharomyces cerevisiae, GI6324778, Length=419, Percent_Identity=35.5608591885441, Blast_Score=246, Evalue=6e-66,
Organism=Saccharomyces cerevisiae, GI6324217, Length=387, Percent_Identity=37.2093023255814, Blast_Score=230, Evalue=3e-61,
Organism=Saccharomyces cerevisiae, GI6321360, Length=338, Percent_Identity=38.7573964497041, Blast_Score=226, Evalue=6e-60,
Organism=Saccharomyces cerevisiae, GI6323021, Length=361, Percent_Identity=34.0720221606648, Blast_Score=201, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6320041, Length=405, Percent_Identity=30.6172839506173, Blast_Score=196, Evalue=6e-51,
Organism=Saccharomyces cerevisiae, GI6321856, Length=386, Percent_Identity=34.4559585492228, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6320224, Length=376, Percent_Identity=32.1808510638298, Blast_Score=191, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6323947, Length=363, Percent_Identity=33.6088154269972, Blast_Score=190, Evalue=3e-49,
Organism=Saccharomyces cerevisiae, GI6320449, Length=357, Percent_Identity=33.8935574229692, Blast_Score=190, Evalue=4e-49,
Organism=Saccharomyces cerevisiae, GI6322912, Length=384, Percent_Identity=34.6354166666667, Blast_Score=190, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6322323, Length=384, Percent_Identity=34.6354166666667, Blast_Score=190, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6324620, Length=393, Percent_Identity=32.3155216284987, Blast_Score=179, Evalue=6e-46,
Organism=Saccharomyces cerevisiae, GI6322427, Length=358, Percent_Identity=33.2402234636872, Blast_Score=176, Evalue=8e-45,
Organism=Saccharomyces cerevisiae, GI6321111, Length=367, Percent_Identity=31.0626702997275, Blast_Score=165, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6321267, Length=424, Percent_Identity=30.8962264150943, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6320119, Length=355, Percent_Identity=28.7323943661972, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6321963, Length=410, Percent_Identity=29.7560975609756, Blast_Score=160, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6320173, Length=434, Percent_Identity=29.2626728110599, Blast_Score=159, Evalue=7e-40,
Organism=Saccharomyces cerevisiae, GI6320400, Length=378, Percent_Identity=30.4232804232804, Blast_Score=151, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6319714, Length=357, Percent_Identity=29.9719887955182, Blast_Score=150, Evalue=4e-37,
Organism=Saccharomyces cerevisiae, GI6319618, Length=412, Percent_Identity=30.5825242718447, Blast_Score=139, Evalue=8e-34,
Organism=Saccharomyces cerevisiae, GI6323306, Length=424, Percent_Identity=26.4150943396226, Blast_Score=130, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6322876, Length=412, Percent_Identity=28.1553398058252, Blast_Score=115, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6324366, Length=356, Percent_Identity=27.247191011236, Blast_Score=106, Evalue=6e-24,
Organism=Drosophila melanogaster, GI17985987, Length=370, Percent_Identity=38.6486486486486, Blast_Score=247, Evalue=1e-65,
Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=36.7521367521368, Blast_Score=236, Evalue=3e-62,
Organism=Drosophila melanogaster, GI24644479, Length=371, Percent_Identity=35.8490566037736, Blast_Score=224, Evalue=9e-59,
Organism=Drosophila melanogaster, GI281361218, Length=371, Percent_Identity=35.8490566037736, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24644481, Length=371, Percent_Identity=35.8490566037736, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24644483, Length=371, Percent_Identity=35.8490566037736, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24644487, Length=371, Percent_Identity=35.8490566037736, Blast_Score=223, Evalue=1e-58,
Organism=Drosophila melanogaster, GI45551833, Length=371, Percent_Identity=35.8490566037736, Blast_Score=223, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24644485, Length=371, Percent_Identity=35.8490566037736, Blast_Score=223, Evalue=1e-58,
Organism=Drosophila melanogaster, GI21356161, Length=358, Percent_Identity=37.4301675977654, Blast_Score=223, Evalue=3e-58,
Organism=Drosophila melanogaster, GI28574962, Length=345, Percent_Identity=38.5507246376812, Blast_Score=222, Evalue=3e-58,
Organism=Drosophila melanogaster, GI21355075, Length=369, Percent_Identity=37.1273712737127, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24584994, Length=380, Percent_Identity=36.3157894736842, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24645031, Length=370, Percent_Identity=34.5945945945946, Blast_Score=215, Evalue=4e-56,
Organism=Drosophila melanogaster, GI18857967, Length=362, Percent_Identity=36.7403314917127, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24662330, Length=359, Percent_Identity=35.933147632312, Blast_Score=210, Evalue=1e-54,
Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=33.4269662921348, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24642151, Length=344, Percent_Identity=37.5, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI28575014, Length=383, Percent_Identity=31.0704960835509, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24642822, Length=406, Percent_Identity=32.7586206896552, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI24585582, Length=353, Percent_Identity=32.5779036827195, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24582080, Length=379, Percent_Identity=32.7176781002639, Blast_Score=182, Evalue=4e-46,
Organism=Drosophila melanogaster, GI24582078, Length=379, Percent_Identity=32.7176781002639, Blast_Score=182, Evalue=4e-46,
Organism=Drosophila melanogaster, GI17136248, Length=379, Percent_Identity=32.7176781002639, Blast_Score=182, Evalue=4e-46,
Organism=Drosophila melanogaster, GI24582075, Length=379, Percent_Identity=32.7176781002639, Blast_Score=182, Evalue=4e-46,
Organism=Drosophila melanogaster, GI19920478, Length=351, Percent_Identity=32.1937321937322, Blast_Score=180, Evalue=1e-45,
Organism=Drosophila melanogaster, GI24581954, Length=358, Percent_Identity=32.4022346368715, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI24581952, Length=358, Percent_Identity=32.4022346368715, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI24581956, Length=358, Percent_Identity=32.4022346368715, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI24583281, Length=372, Percent_Identity=30.1075268817204, Blast_Score=179, Evalue=4e-45,
Organism=Drosophila melanogaster, GI24583279, Length=373, Percent_Identity=30.0268096514745, Blast_Score=178, Evalue=5e-45,
Organism=Drosophila melanogaster, GI17136814, Length=400, Percent_Identity=31.5, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI281365720, Length=306, Percent_Identity=36.6013071895425, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24666101, Length=373, Percent_Identity=30.5630026809651, Blast_Score=172, Evalue=3e-43,
Organism=Drosophila melanogaster, GI28571808, Length=344, Percent_Identity=32.5581395348837, Blast_Score=171, Evalue=1e-42,
Organism=Drosophila melanogaster, GI28571809, Length=344, Percent_Identity=32.5581395348837, Blast_Score=171, Evalue=1e-42,
Organism=Drosophila melanogaster, GI20130173, Length=431, Percent_Identity=29.9303944315545, Blast_Score=165, Evalue=5e-41,
Organism=Drosophila melanogaster, GI24643725, Length=422, Percent_Identity=28.436018957346, Blast_Score=165, Evalue=7e-41,
Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=30.08356545961, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI21355559, Length=395, Percent_Identity=30.6329113924051, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI18859659, Length=449, Percent_Identity=29.6213808463252, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI28571338, Length=449, Percent_Identity=29.6213808463252, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=30.8868501529052, Blast_Score=132, Evalue=4e-31,
Organism=Drosophila melanogaster, GI17136666, Length=413, Percent_Identity=25.90799031477, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI24640164, Length=353, Percent_Identity=23.7960339943343, Blast_Score=99, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 49053; Mature: 48922

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETHLSTQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKT
CCCCCCCHHHHCCCCCCHHHHHHHHHCCCHHHCCHHHHCCCEEEECCCCCCCCCCCCCHH
MAFLVATFNHLLSTPIPEGRQINQPRAIIMAPTRELAIQIAKDAILLAKHTRLKVGIVYG
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHEEEECCEEEEEEEEC
GESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIISLTAIQAVVLDEADRMFDLGFIKDIR
CCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
FLFRRMPDANQRLNMLFSATLSMKVQELAYDHMNDPVKVDIAPDEKTSKNIKEEVFYPSQ
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCC
EDKMRLLLTLIEEDWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILE
CHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
QFTSGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSISFA
HHCCCCEEEEEEECHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEE
CEEYALNLPAIESYINHSIPVSNYDSSALLEDIPAPVKIPRKHPAGTRNLRERAGAGRPQ
HHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCC
GAHRSGGRPPRHDRTRRHS
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SETHLSTQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKT
CCCCCCHHHHCCCCCCHHHHHHHHHCCCHHHCCHHHHCCCEEEECCCCCCCCCCCCCHH
MAFLVATFNHLLSTPIPEGRQINQPRAIIMAPTRELAIQIAKDAILLAKHTRLKVGIVYG
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHEEEECCEEEEEEEEC
GESYDVQRKVLDQGVDILIGTTGRIIDYVRQGIISLTAIQAVVLDEADRMFDLGFIKDIR
CCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
FLFRRMPDANQRLNMLFSATLSMKVQELAYDHMNDPVKVDIAPDEKTSKNIKEEVFYPSQ
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCC
EDKMRLLLTLIEEDWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILE
CHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
QFTSGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSISFA
HHCCCCEEEEEEECHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEE
CEEYALNLPAIESYINHSIPVSNYDSSALLEDIPAPVKIPRKHPAGTRNLRERAGAGRPQ
HHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCC
GAHRSGGRPPRHDRTRRHS
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]