Click here to switch to the map view.

The map label for this gene is 120597272

Identifier: 120597272

GI number: 120597272

Start: 479664

End: 480743

Strand: Direct

Name: 120597272

Synonym: Sputw3181_0441

Alternate gene names: NA

Gene position: 479664-480743 (Clockwise)

Preceding gene: 120597271

Following gene: 120597273

Centisome position: 10.19

GC content: 59.91

Gene sequence:

>1080_bases
GTGGTCCGCCGCCGATACACCTGCCGGGCCTGCAAGACAACATTCAGGCCCCAGCTACCGGAGATGGTGGACGGATTCCG
TATGACACTGCGGCTGCATGAGTACGTGGAGAAGGAATCCTTCAACCACCCCTACACCTTTGTGGCGGCACAGACCGGCC
TGGACGAGAAGACGGTGCGCGACATCTTCAACGCCCGCGCCGAGTTCCTGGGGCGCTGGCACCGCTTCGAGACGCCCCGC
ATCCTGGGCATTGACGAGCTATACCTGAACAAGCGCTACCGCTGCATTCTGACCAACATTGAGGAGCGAACCCTGCTCGA
CCTGCTGGCCACCCGCCGCCAGAACGTGGTGACCAACTACCTGATGAAGCTGAAAGACCGGCAGAAGGTCGAGATCGTCA
GCATGGACATGTGGAACCCCTACCGGGCAGCGGTCAAGGCTGTGCTGCCCCAGGCCCGTATCGTGGTCGATAAGTTCCAT
GTGGTGCGCATGGCCAACGATGCCCTAGAGAGAGTGCGCAAGGGCCTCAGAAAGGAGCTGAAACCGTCCCAGAGCCGGAC
TCTCAAGGGAGACCGGAAAATCCTGCTGAAACGCGCTCACGAAGTCTCAGACCGGGAGCGCCTCATCATGGAGACCTGGA
CAGGCGCGTTCCCGCAACTGCTGGCCGCCTACGAGCACAAGGAGCGCTTCTACGGCATCTGGGACGCCACCACACGGCTC
CAGGCAGAAGCCGCCCTGGACGAGTGGATAGCCACCATCCCGAAGGGCCAAAAGGAAGTCTGGAGCGATCTGGTCAGGGC
AGTGGGAAACTGGCGCGAAGAGACCATGACCTACTTCGAGACGGACATGCCCGTCACCAACGCTTACACGGAGTCCATCA
ACCGACTGGCCAAGGACAAGAACCGTGAAGGGCGCGGTTACTCCTTCGAGGTGATGCGGGCACGAATGCTCTACACCACG
AAGCACAAGAAGAAGGCACCGACTGCGAAGGTCTCTCCTTTCTACAAGAAAACCATCGGTTACGGACTGCCGGACTTCGC
AGAGGAACTCAACTACGGAGTCGATCTATCAACCATCTGA

Upstream 100 bases:

>100_bases
CTGCGAGGAATGCGGCGTGCAGGGTGAGTTCGTACGGTTCGGCAAGCGTGACGTTCCCTATCGTGATCTGCCCATCCACG
GCAAGCGGGTCACTCTCTGG

Downstream 100 bases:

>100_bases
GGGTGGTATCAGATTGATGGGGTGAAGGTGCCCCATCAACCATTAAATCCGTATACCCTTTATCAGGACTTAGACAAACG
ATTCAACTGCTGGCTGAAAC

Product: transposase, IS204/IS1001/IS1096/IS1165 family protein

Products: NA

Alternate protein names: Transposase Family Protein; Transposase Of; Transposase Subfamily; Transposase TnpA; Transposase For IS; Transposase And Inactivated Derivatives; Transposase-Like Protein; Transposase Tnpa Isl3 Family; Truncated; TnpA Transposase; ISL3 Family Transposase; Transposase TnpA ISL3 Family; ISBma1 Transposase

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MVRRRYTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPR
ILGIDELYLNKRYRCILTNIEERTLLDLLATRRQNVVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFH
VVRMANDALERVRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWDATTRL
QAEAALDEWIATIPKGQKEVWSDLVRAVGNWREETMTYFETDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTT
KHKKKAPTAKVSPFYKKTIGYGLPDFAEELNYGVDLSTI

Sequences:

>Translated_359_residues
MVRRRYTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPR
ILGIDELYLNKRYRCILTNIEERTLLDLLATRRQNVVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFH
VVRMANDALERVRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWDATTRL
QAEAALDEWIATIPKGQKEVWSDLVRAVGNWREETMTYFETDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTT
KHKKKAPTAKVSPFYKKTIGYGLPDFAEELNYGVDLSTI
>Mature_359_residues
MVRRRYTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVRDIFNARAEFLGRWHRFETPR
ILGIDELYLNKRYRCILTNIEERTLLDLLATRRQNVVTNYLMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFH
VVRMANDALERVRKGLRKELKPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWDATTRL
QAEAALDEWIATIPKGQKEVWSDLVRAVGNWREETMTYFETDMPVTNAYTESINRLAKDKNREGRGYSFEVMRARMLYTT
KHKKKAPTAKVSPFYKKTIGYGLPDFAEELNYGVDLSTI

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42306; Mature: 42306

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRRYTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVR
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH
DIFNARAEFLGRWHRFETPRILGIDELYLNKRYRCILTNIEERTLLDLLATRRQNVVTNY
HHHHHHHHHHHHHHHCCCCCEECHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
LMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALERVRKGLRKEL
HHHHCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWDATTRL
CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEHHHHHHH
QAEAALDEWIATIPKGQKEVWSDLVRAVGNWREETMTYFETDMPVTNAYTESINRLAKDK
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
NREGRGYSFEVMRARMLYTTKHKKKAPTAKVSPFYKKTIGYGLPDFAEELNYGVDLSTI
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MVRRRYTCRACKTTFRPQLPEMVDGFRMTLRLHEYVEKESFNHPYTFVAAQTGLDEKTVR
CCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH
DIFNARAEFLGRWHRFETPRILGIDELYLNKRYRCILTNIEERTLLDLLATRRQNVVTNY
HHHHHHHHHHHHHHHCCCCCEECHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
LMKLKDRQKVEIVSMDMWNPYRAAVKAVLPQARIVVDKFHVVRMANDALERVRKGLRKEL
HHHHCCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KPSQSRTLKGDRKILLKRAHEVSDRERLIMETWTGAFPQLLAAYEHKERFYGIWDATTRL
CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEHHHHHHH
QAEAALDEWIATIPKGQKEVWSDLVRAVGNWREETMTYFETDMPVTNAYTESINRLAKDK
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHC
NREGRGYSFEVMRARMLYTTKHKKKAPTAKVSPFYKKTIGYGLPDFAEELNYGVDLSTI
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA