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The map label for this gene is yjjU [H]

Identifier: 120597236

GI number: 120597236

Start: 447112

End: 447981

Strand: Direct

Name: yjjU [H]

Synonym: Sputw3181_0405

Alternate gene names: 120597236

Gene position: 447112-447981 (Clockwise)

Preceding gene: 120597235

Following gene: 120597239

Centisome position: 9.5

GC content: 44.71

Gene sequence:

>870_bases
ATGAAAGATGTGGCCTTAGTATTAGAAGGTGGCGGCCTCAGAGCCATTTATACCGCAGGTGTATTAGACGCGTTTCTACA
GCAGTCACTCAACTTTAGTTATGTGATTGGTGTGTCGGCGGGAGCGATTTATCCTGCATCCTATGTGTCACGTCAGTTTG
GCCGTAATCTCCAAATCCAGCAGCAATATCTTAATGACAAACGCTATATGGGCGTTCGTCATTGGCTGGCGACAGGCAAC
TATGTCAACACTGACTTTACCTACCGTCGTATGGCTTATGAGTTGCTGCCATTTGATTTTGAGACATTTTTAAAGAGTGA
CACTGAATTTAAAGTAGGGGCTTTTAACTGCAACACAGGCAAAACGGATTACTTTAGCAGAGTAGATTTTAGCTGCCATG
ATAAATTATTGGATGTACTTATTGCCTCCTCTAGCCTGCCTTTTATGTCTAAACCCTGCGTAATCAACCACAATCCTTAC
CTTGATGGTGGGATTGCTGAACCTATACCTGTGCTGCAGGCTCAAAAAGACGGTTATTCTCGCCAAGTAGTGATCTTGAC
TCAAGATCAGCACTACCAAAAATCACCCATGAAAATGAATTGGTTAGCGCGCAAAACCTATAAACGCTATCCCGCAGTTG
CCCATGCATTAAGCGAGCGCCATCGAGTTTACAACCGCGCGTTACTCGATATCGACCAAGCCGTTATCGCAGGTAAAGCC
TTTGTGATCCGTCCCGACAAGCCACTTAATTTATCAAGACTTGATCGTAATATTGATAAAGTGACCGCTGTTTATCAGCA
AGGGCTTACCGATGGGAATGCTATTCTGCCCACCTTGCTTACTTGGCTAGTGAAGCCTGAAGGTGGCTAA

Upstream 100 bases:

>100_bases
TCACTATGTTGCCAGCGAAGGTGTAGAGTTTGCACATTCATTTCTTACTCAAGCTGGGGTATTCTGCTGATATGAATCAA
TAAAAAGATGTACCCAATAG

Downstream 100 bases:

>100_bases
GTTTGAGGCGAGTGTGATTGATGCACTCGATTGATAATCAACTCTCGCAGCCATTTATGGCTTAAGTCGTGTTCGAAGTG
TTTGTGCCACATCAATAAAT

Product: patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MKDVALVLEGGGLRAIYTAGVLDAFLQQSLNFSYVIGVSAGAIYPASYVSRQFGRNLQIQQQYLNDKRYMGVRHWLATGN
YVNTDFTYRRMAYELLPFDFETFLKSDTEFKVGAFNCNTGKTDYFSRVDFSCHDKLLDVLIASSSLPFMSKPCVINHNPY
LDGGIAEPIPVLQAQKDGYSRQVVILTQDQHYQKSPMKMNWLARKTYKRYPAVAHALSERHRVYNRALLDIDQAVIAGKA
FVIRPDKPLNLSRLDRNIDKVTAVYQQGLTDGNAILPTLLTWLVKPEGG

Sequences:

>Translated_289_residues
MKDVALVLEGGGLRAIYTAGVLDAFLQQSLNFSYVIGVSAGAIYPASYVSRQFGRNLQIQQQYLNDKRYMGVRHWLATGN
YVNTDFTYRRMAYELLPFDFETFLKSDTEFKVGAFNCNTGKTDYFSRVDFSCHDKLLDVLIASSSLPFMSKPCVINHNPY
LDGGIAEPIPVLQAQKDGYSRQVVILTQDQHYQKSPMKMNWLARKTYKRYPAVAHALSERHRVYNRALLDIDQAVIAGKA
FVIRPDKPLNLSRLDRNIDKVTAVYQQGLTDGNAILPTLLTWLVKPEGG
>Mature_289_residues
MKDVALVLEGGGLRAIYTAGVLDAFLQQSLNFSYVIGVSAGAIYPASYVSRQFGRNLQIQQQYLNDKRYMGVRHWLATGN
YVNTDFTYRRMAYELLPFDFETFLKSDTEFKVGAFNCNTGKTDYFSRVDFSCHDKLLDVLIASSSLPFMSKPCVINHNPY
LDGGIAEPIPVLQAQKDGYSRQVVILTQDQHYQKSPMKMNWLARKTYKRYPAVAHALSERHRVYNRALLDIDQAVIAGKA
FVIRPDKPLNLSRLDRNIDKVTAVYQQGLTDGNAILPTLLTWLVKPEGG

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=286, Percent_Identity=29.020979020979, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 32691; Mature: 32691

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDVALVLEGGGLRAIYTAGVLDAFLQQSLNFSYVIGVSAGAIYPASYVSRQFGRNLQIQ
CCCEEEEEECCCEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCCCHH
QQYLNDKRYMGVRHWLATGNYVNTDFTYRRMAYELLPFDFETFLKSDTEFKVGAFNCNTG
HHHCCCHHHHHHHHHHHCCCEECCCHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCC
KTDYFSRVDFSCHDKLLDVLIASSSLPFMSKPCVINHNPYLDGGIAEPIPVLQAQKDGYS
CCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCHHEECCCCCC
RQVVILTQDQHYQKSPMKMNWLARKTYKRYPAVAHALSERHRVYNRALLDIDQAVIAGKA
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FVIRPDKPLNLSRLDRNIDKVTAVYQQGLTDGNAILPTLLTWLVKPEGG
EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKDVALVLEGGGLRAIYTAGVLDAFLQQSLNFSYVIGVSAGAIYPASYVSRQFGRNLQIQ
CCCEEEEEECCCEEEEHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHCCCCCHH
QQYLNDKRYMGVRHWLATGNYVNTDFTYRRMAYELLPFDFETFLKSDTEFKVGAFNCNTG
HHHCCCHHHHHHHHHHHCCCEECCCHHHHHHHHHHCCCCHHHHHCCCCCEEEEEEECCCC
KTDYFSRVDFSCHDKLLDVLIASSSLPFMSKPCVINHNPYLDGGIAEPIPVLQAQKDGYS
CCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCHHEECCCCCC
RQVVILTQDQHYQKSPMKMNWLARKTYKRYPAVAHALSERHRVYNRALLDIDQAVIAGKA
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
FVIRPDKPLNLSRLDRNIDKVTAVYQQGLTDGNAILPTLLTWLVKPEGG
EEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]