| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is ftsQ [H]
Identifier: 120597223
GI number: 120597223
Start: 424696
End: 425445
Strand: Direct
Name: ftsQ [H]
Synonym: Sputw3181_0392
Alternate gene names: 120597223
Gene position: 424696-425445 (Clockwise)
Preceding gene: 120597222
Following gene: 120597224
Centisome position: 9.02
GC content: 44.4
Gene sequence:
>750_bases ATGTCACGGGTCAATTGGTATCTGTGGAGTGGGATTGGCTTTTTAAGTTTAGTGATTGGTAGTTTCGTCTTTGCAGGTTA CCAATTACATAAGTTTTTGAATGATGCCAGTACACTGCCGATAGAAGCGGTTGCCATCAAAGGTGAACGGACTTACACCA CAGATAGAGATATACAAATAGCACTACAGGATTTGATGCAGCGAAGTTTTTTTAGTGCTGATATCTCCTTAGTACAGCAG GCATTAGAAGCCTTGCCTTGGGTATATCGTGCGTCAGTAAGGCGCGAGTGGCCAGCGAAACTCAGGGTGTATTTGCAAGA ACAACAACCCGTCGCCCATTGGAATGGAGCATCGTGGTTAAATGTGCATGGTGAAGTGTTTGAAGCGCCAGCGCGCCCAG AGCTTGAGTATTTGCCACAGCTATCAGGGCCTGATGATATGGGAGTCGAAGTATTAACCGCGTATGCACAGGTTAATTCA TTGCTTAAAATTAATGGTTTTACTTTAGCTAGCTTGAATTTAACGCCGCGTCATGCGTGGCACGCGACCCTAGAGAACGG TATCGTTTTAGACTTGGGTCGAGAAGATAAAATTGCTCGGATACAAAGATTTATTACTGTTTATCCTCTTTTGGCAAAAC AAGATAAACCGATTGCCAGAGTGGATTTACGCTACGACACAGGGTTGGCCGTAGGCTGGGGCGATGCACAAACAAGAGAA CTGATAATTAATGACCAAAAACCAAGATAG
Upstream 100 bases:
>100_bases CTCTATATAATGGCCGGTTTTCTGTGGTTTTTGGTAAGTGTCGTTAAAGGTGGGATCAAACGTGTCTTGGAGTGATAAGA GGCGGCACTGGTGGGCGAGA
Downstream 100 bases:
>100_bases AAATCTGATCGTCGGATTGGACATAGGAACCTCTAAGGTCGCAGTGATCATAGGCGAAGTTCTGCCCGATGGCGAAATCA GCATAGTCGGCCTTGGCAAT
Product: polypeptide-transport-associated domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MSRVNWYLWSGIGFLSLVIGSFVFAGYQLHKFLNDASTLPIEAVAIKGERTYTTDRDIQIALQDLMQRSFFSADISLVQQ ALEALPWVYRASVRREWPAKLRVYLQEQQPVAHWNGASWLNVHGEVFEAPARPELEYLPQLSGPDDMGVEVLTAYAQVNS LLKINGFTLASLNLTPRHAWHATLENGIVLDLGREDKIARIQRFITVYPLLAKQDKPIARVDLRYDTGLAVGWGDAQTRE LIINDQKPR
Sequences:
>Translated_249_residues MSRVNWYLWSGIGFLSLVIGSFVFAGYQLHKFLNDASTLPIEAVAIKGERTYTTDRDIQIALQDLMQRSFFSADISLVQQ ALEALPWVYRASVRREWPAKLRVYLQEQQPVAHWNGASWLNVHGEVFEAPARPELEYLPQLSGPDDMGVEVLTAYAQVNS LLKINGFTLASLNLTPRHAWHATLENGIVLDLGREDKIARIQRFITVYPLLAKQDKPIARVDLRYDTGLAVGWGDAQTRE LIINDQKPR >Mature_248_residues SRVNWYLWSGIGFLSLVIGSFVFAGYQLHKFLNDASTLPIEAVAIKGERTYTTDRDIQIALQDLMQRSFFSADISLVQQA LEALPWVYRASVRREWPAKLRVYLQEQQPVAHWNGASWLNVHGEVFEAPARPELEYLPQLSGPDDMGVEVLTAYAQVNSL LKINGFTLASLNLTPRHAWHATLENGIVLDLGREDKIARIQRFITVYPLLAKQDKPIARVDLRYDTGLAVGWGDAQTREL IINDQKPR
Specific function: This protein may be involved in septum formation [H]
COG id: COG1589
COG function: function code M; Cell division septal protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type II membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsQ family [H]
Homologues:
Organism=Escherichia coli, GI1786281, Length=239, Percent_Identity=36.8200836820084, Blast_Score=158, Evalue=3e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005548 - InterPro: IPR013685 [H]
Pfam domain/function: PF03799 FtsQ; PF08478 POTRA_1 [H]
EC number: NA
Molecular weight: Translated: 28261; Mature: 28129
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVNWYLWSGIGFLSLVIGSFVFAGYQLHKFLNDASTLPIEAVAIKGERTYTTDRDIQI CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEECCCCHHHH ALQDLMQRSFFSADISLVQQALEALPWVYRASVRREWPAKLRVYLQEQQPVAHWNGASWL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHEEEEEECCCCCCCCCCCCEE NVHGEVFEAPARPELEYLPQLSGPDDMGVEVLTAYAQVNSLLKINGFTLASLNLTPRHAW EECCCEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHEEEECCEEEEEECCCCCHHH HATLENGIVLDLGREDKIARIQRFITVYPLLAKQDKPIARVDLRYDTGLAVGWGDAQTRE HHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCCEE LIINDQKPR EEECCCCCC >Mature Secondary Structure SRVNWYLWSGIGFLSLVIGSFVFAGYQLHKFLNDASTLPIEAVAIKGERTYTTDRDIQI CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEECCCCHHHH ALQDLMQRSFFSADISLVQQALEALPWVYRASVRREWPAKLRVYLQEQQPVAHWNGASWL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHEEEEEECCCCCCCCCCCCEE NVHGEVFEAPARPELEYLPQLSGPDDMGVEVLTAYAQVNSLLKINGFTLASLNLTPRHAW EECCCEECCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHEEEECCEEEEEECCCCCHHH HATLENGIVLDLGREDKIARIQRFITVYPLLAKQDKPIARVDLRYDTGLAVGWGDAQTRE HHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEECCCCCCEE LIINDQKPR EEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2995680; 6094474; 2228979; 1630901; 9278503; 3528126 [H]