Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597197

Identifier: 120597197

GI number: 120597197

Start: 392013

End: 392675

Strand: Direct

Name: 120597197

Synonym: Sputw3181_0366

Alternate gene names: NA

Gene position: 392013-392675 (Clockwise)

Preceding gene: 120597196

Following gene: 120597199

Centisome position: 8.33

GC content: 34.84

Gene sequence:

>663_bases
ATGTCGAGTGATAACTTATTGATGAAAAAACAGCAAATAGATCCGTTTTCAGCGTCATTTTCATCCTTGTTAGTAATTGT
ATTTTCTAAAAGTAATTCGAAAAACTTTCCTTTAGCACTGAACATTGCTCAAGGAGCAGAAAAATTCGTAGAGACCACAG
TGTCAGGAAAAACAACATATAGCGTTTGTTTTGGTGGCAATCAGGTAGATGCAGCAAGGGCAATCGCATTTTTAGACTAT
GCAGCTTCTTGGAAAGGAGTCCAAATTTTCTCACAAGGAAAATTAATTCCATCAAGTTATCATATTGTTGAAGTTCTGAA
TTGCTACCTGAAATCACAATCTTGTAGGGATTATAAAGCTCATTGCCAAACCGTCATTGATGATCCATTTAATACCGAAA
TTGAAAAAATTGGTGGTATCGCATTTGTAATAAAAATCACAGAGACGCCAACTATTAAGCAAGAAATAGAAATAGACCGG
TATGCATTTCCTTGTAAACATATATTCCATAGATTTAGGTTTCAATGTGATCATCCTTCTTGTCCAGAAGATCAAATTCA
AGCTAAAGCTGTTGACCTAGGTTGTGATTGGTGTCCAAATTTTGATGCTGATAGCTGGAAAAAAATTGGTACCAAAACGG
TATTGAAAGAGTTTTTTGAGTAA

Upstream 100 bases:

>100_bases
TTAAGAGCTATTCCGAAACGCTTGCCAGATTCGCTTCGTAGTATGGTAAGCATTGCGTCATACCTTAGTGTTTCGTTATT
TTTTACAAGGAGATATGAAA

Downstream 100 bases:

>100_bases
ATAAAGGCAAACGTGACTGCTACGCAGTCCCATAAGTAAAAGTTAATCCATCAAAATTGTTATCCGAAACTCACTACCAA
AGTTGAACTTCTAACAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSSDNLLMKKQQIDPFSASFSSLLVIVFSKSNSKNFPLALNIAQGAEKFVETTVSGKTTYSVCFGGNQVDAARAIAFLDY
AASWKGVQIFSQGKLIPSSYHIVEVLNCYLKSQSCRDYKAHCQTVIDDPFNTEIEKIGGIAFVIKITETPTIKQEIEIDR
YAFPCKHIFHRFRFQCDHPSCPEDQIQAKAVDLGCDWCPNFDADSWKKIGTKTVLKEFFE

Sequences:

>Translated_220_residues
MSSDNLLMKKQQIDPFSASFSSLLVIVFSKSNSKNFPLALNIAQGAEKFVETTVSGKTTYSVCFGGNQVDAARAIAFLDY
AASWKGVQIFSQGKLIPSSYHIVEVLNCYLKSQSCRDYKAHCQTVIDDPFNTEIEKIGGIAFVIKITETPTIKQEIEIDR
YAFPCKHIFHRFRFQCDHPSCPEDQIQAKAVDLGCDWCPNFDADSWKKIGTKTVLKEFFE
>Mature_219_residues
SSDNLLMKKQQIDPFSASFSSLLVIVFSKSNSKNFPLALNIAQGAEKFVETTVSGKTTYSVCFGGNQVDAARAIAFLDYA
ASWKGVQIFSQGKLIPSSYHIVEVLNCYLKSQSCRDYKAHCQTVIDDPFNTEIEKIGGIAFVIKITETPTIKQEIEIDRY
AFPCKHIFHRFRFQCDHPSCPEDQIQAKAVDLGCDWCPNFDADSWKKIGTKTVLKEFFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24777; Mature: 24646

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDNLLMKKQQIDPFSASFSSLLVIVFSKSNSKNFPLALNIAQGAEKFVETTVSGKTTY
CCCCCCEEHHHCCCCHHHCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCCEEE
SVCFGGNQVDAARAIAFLDYAASWKGVQIFSQGKLIPSSYHIVEVLNCYLKSQSCRDYKA
EEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHH
HCQTVIDDPFNTEIEKIGGIAFVIKITETPTIKQEIEIDRYAFPCKHIFHRFRFQCDHPS
HHHHHHCCCCCCHHHHCCCEEEEEEECCCCCCHHHHCHHHHCCCHHHHHHHHCEECCCCC
CPEDQIQAKAVDLGCDWCPNFDADSWKKIGTKTVLKEFFE
CCHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSDNLLMKKQQIDPFSASFSSLLVIVFSKSNSKNFPLALNIAQGAEKFVETTVSGKTTY
CCCCCEEHHHCCCCHHHCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHHHHCCCCEEE
SVCFGGNQVDAARAIAFLDYAASWKGVQIFSQGKLIPSSYHIVEVLNCYLKSQSCRDYKA
EEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHH
HCQTVIDDPFNTEIEKIGGIAFVIKITETPTIKQEIEIDRYAFPCKHIFHRFRFQCDHPS
HHHHHHCCCCCCHHHHCCCEEEEEEECCCCCCHHHHCHHHHCCCHHHHHHHHCEECCCCC
CPEDQIQAKAVDLGCDWCPNFDADSWKKIGTKTVLKEFFE
CCHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA