Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120597193

Identifier: 120597193

GI number: 120597193

Start: 387808

End: 389502

Strand: Direct

Name: 120597193

Synonym: Sputw3181_0362

Alternate gene names: NA

Gene position: 387808-389502 (Clockwise)

Preceding gene: 120597192

Following gene: 120597194

Centisome position: 8.24

GC content: 34.75

Gene sequence:

>1695_bases
ATGAAACTGCTCAAATTAACGACAAAGGTTGATGGATGTATAATTCGAGAGATCGAATTCAAAGATACTCTAAATATCAT
CACCAATAAGAGAGATTCGAGTTTATCAGGTAACCAGATCGGTAAGTCTGTGCCTGGTCGTATCATCGATTTCTTGTTAG
ACGGTTCTATTGGCCCTATTTATATTGATGAAGAATTCGACACAGCTGAACCGCACATTCATAAGTTATTTAATGAACAC
AATGTGACCTGTACCCTTGCGTATATTGGGTTGGACGGTAACATCGCTGAGATCAAACGAAACCTTGCCATTGAAAGTAC
TGACAGATCTTATTATGTTAACGATGAAGTTAAGAGCAAAAAAGAGTACAACAATCATATATTGAATACTATGTTCAATG
TATATTCTGACAAGCCTACCCTTAGAAAGCTAGCTCCAAAGTTTCTGAGAACAGATACTCATCGAATGACAAAGACAGTC
AAGTTCAATGATGATAAGTTTAAGATATCTCAAGCAGATAGAAATACTCTGTTCTTGTACCTATTTAACTTTGGTGATAC
TGAAATTCTGAGTGCAATTCAGAGTATTAAAACCTTCCTTAGTAACTATGATAATAAGTTAAAATCATTTAATGGCATTA
TAAAGGATGATAAAATCCTTAGTACTATTAATAGCACTCAAAAAGAGCTCCGAAAGCTAGAAAGATCACTACTACTGAGC
GAAAACAATATAGATAAGCTAGCGATAATCGGTGAAATTAATCACATCGATAATGAACAAAATAAATTATCTAACCAGAT
TCTATCGTTAGATCTAAAAGTAAATAATATAAAGAAGACTCAAAAACTACTTGAAAGCAACAAAAACCATCAACTACTTA
GTGAACTCGAGACTATCTATGGCTATGCATCTGTTAAGCTAGGGGCTGTTATTAATGACTATGATAATGTGCTTAAATTT
CATAATTATTTGGTCGAGACGAAAACAGAATTTGTTACTGATGGTCTTGATAAGCTTGAAGATCAACTTCTTGATAATAC
TCTTAAACTCAAGGCTTTAGAGCAAAATAAATCTTCGCTTTACCATGAACTGAAGTCTAAGAAGAAAATTGAAGAGATCT
CAGAGTCCGTCAAGACTATTGGTGAGCTAAATAAAACGCTAATTGAGCTAAATGCTATTGTCGAGAAGAAGAATAGTATA
GAAGACAGATTAAAAAAAGAGACTGAAAGACTAGAAGGGCTTTCAGGAAGGCTCGCTGCTGAACTTCAAAACGTTCACAT
ATTCGAAACCGAGTTTAAAAAACACTTTAAGGCTTACACCAATACCTTCTATGGGGTCGAATATAACTTCAATCTGAACT
TAGATGCTACAAATGGCAATTGCCAACCAACTGTAGATGATATCCAGTCAAACAATGATGGAGGATTGAAACGTCTTGAA
GTAATCACTTTTGACTTGTCCTATATAAAAACAGTTGATTCACTTGGTCTTAAAAGACCAACGTTTGTTGTACACGACTC
TATAGACGAAGTTGACATTAAGCATATACGTCAATTGTTCGATGAGTCGATAAAACTGTCTGGCCAGCAGGTCGTATCGA
TGTTGGTGAGTCAACTCGAAGATAATGATTATGAGAAGTACAAAAATTATATAGTTCTAGAGCTATCTCAGGAGGACAAG
TATTTCAAAGTCTAG

Upstream 100 bases:

>100_bases
GAAAGTGAGCTTTCTATTTCCATCGACCATATGATCCTAACTCTTGACTGGCTATACACTATTTCTGCTATTAAACAAAA
TAACAATGAGGTTTCCATCA

Downstream 100 bases:

>100_bases
GTTAATGTATAGAAAGTCTTGTTTTTTTGCTTTGTATATTTCCCCATACTTGAAGTAATCCATCGATAGTTAATTTAGTA
AGGCCGATAACTCATTCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MKLLKLTTKVDGCIIREIEFKDTLNIITNKRDSSLSGNQIGKSVPGRIIDFLLDGSIGPIYIDEEFDTAEPHIHKLFNEH
NVTCTLAYIGLDGNIAEIKRNLAIESTDRSYYVNDEVKSKKEYNNHILNTMFNVYSDKPTLRKLAPKFLRTDTHRMTKTV
KFNDDKFKISQADRNTLFLYLFNFGDTEILSAIQSIKTFLSNYDNKLKSFNGIIKDDKILSTINSTQKELRKLERSLLLS
ENNIDKLAIIGEINHIDNEQNKLSNQILSLDLKVNNIKKTQKLLESNKNHQLLSELETIYGYASVKLGAVINDYDNVLKF
HNYLVETKTEFVTDGLDKLEDQLLDNTLKLKALEQNKSSLYHELKSKKKIEEISESVKTIGELNKTLIELNAIVEKKNSI
EDRLKKETERLEGLSGRLAAELQNVHIFETEFKKHFKAYTNTFYGVEYNFNLNLDATNGNCQPTVDDIQSNNDGGLKRLE
VITFDLSYIKTVDSLGLKRPTFVVHDSIDEVDIKHIRQLFDESIKLSGQQVVSMLVSQLEDNDYEKYKNYIVLELSQEDK
YFKV

Sequences:

>Translated_564_residues
MKLLKLTTKVDGCIIREIEFKDTLNIITNKRDSSLSGNQIGKSVPGRIIDFLLDGSIGPIYIDEEFDTAEPHIHKLFNEH
NVTCTLAYIGLDGNIAEIKRNLAIESTDRSYYVNDEVKSKKEYNNHILNTMFNVYSDKPTLRKLAPKFLRTDTHRMTKTV
KFNDDKFKISQADRNTLFLYLFNFGDTEILSAIQSIKTFLSNYDNKLKSFNGIIKDDKILSTINSTQKELRKLERSLLLS
ENNIDKLAIIGEINHIDNEQNKLSNQILSLDLKVNNIKKTQKLLESNKNHQLLSELETIYGYASVKLGAVINDYDNVLKF
HNYLVETKTEFVTDGLDKLEDQLLDNTLKLKALEQNKSSLYHELKSKKKIEEISESVKTIGELNKTLIELNAIVEKKNSI
EDRLKKETERLEGLSGRLAAELQNVHIFETEFKKHFKAYTNTFYGVEYNFNLNLDATNGNCQPTVDDIQSNNDGGLKRLE
VITFDLSYIKTVDSLGLKRPTFVVHDSIDEVDIKHIRQLFDESIKLSGQQVVSMLVSQLEDNDYEKYKNYIVLELSQEDK
YFKV
>Mature_564_residues
MKLLKLTTKVDGCIIREIEFKDTLNIITNKRDSSLSGNQIGKSVPGRIIDFLLDGSIGPIYIDEEFDTAEPHIHKLFNEH
NVTCTLAYIGLDGNIAEIKRNLAIESTDRSYYVNDEVKSKKEYNNHILNTMFNVYSDKPTLRKLAPKFLRTDTHRMTKTV
KFNDDKFKISQADRNTLFLYLFNFGDTEILSAIQSIKTFLSNYDNKLKSFNGIIKDDKILSTINSTQKELRKLERSLLLS
ENNIDKLAIIGEINHIDNEQNKLSNQILSLDLKVNNIKKTQKLLESNKNHQLLSELETIYGYASVKLGAVINDYDNVLKF
HNYLVETKTEFVTDGLDKLEDQLLDNTLKLKALEQNKSSLYHELKSKKKIEEISESVKTIGELNKTLIELNAIVEKKNSI
EDRLKKETERLEGLSGRLAAELQNVHIFETEFKKHFKAYTNTFYGVEYNFNLNLDATNGNCQPTVDDIQSNNDGGLKRLE
VITFDLSYIKTVDSLGLKRPTFVVHDSIDEVDIKHIRQLFDESIKLSGQQVVSMLVSQLEDNDYEKYKNYIVLELSQEDK
YFKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64903; Mature: 64903

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLKLTTKVDGCIIREIEFKDTLNIITNKRDSSLSGNQIGKSVPGRIIDFLLDGSIGPI
CCEEEEECCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCE
YIDEEFDTAEPHIHKLFNEHNVTCTLAYIGLDGNIAEIKRNLAIESTDRSYYVNDEVKSK
EECCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHCEEEECCCCEEECCHHHHH
KEYNNHILNTMFNVYSDKPTLRKLAPKFLRTDTHRMTKTVKFNDDKFKISQADRNTLFLY
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHEEEEECCCEEEEECCCCCEEEEE
LFNFGDTEILSAIQSIKTFLSNYDNKLKSFNGIIKDDKILSTINSTQKELRKLERSLLLS
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ENNIDKLAIIGEINHIDNEQNKLSNQILSLDLKVNNIKKTQKLLESNKNHQLLSELETIY
CCCCCEEEEEEECHHCCCHHHHHHHHHEEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHH
GYASVKLGAVINDYDNVLKFHNYLVETKTEFVTDGLDKLEDQLLDNTLKLKALEQNKSSL
HHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHEEHHHHHHHHHH
YHELKSKKKIEEISESVKTIGELNKTLIELNAIVEKKNSIEDRLKKETERLEGLSGRLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ELQNVHIFETEFKKHFKAYTNTFYGVEYNFNLNLDATNGNCQPTVDDIQSNNDGGLKRLE
HHHCCEEEHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCCCCHHHHCCCCCCCCEEEE
VITFDLSYIKTVDSLGLKRPTFVVHDSIDEVDIKHIRQLFDESIKLSGQQVVSMLVSQLE
EEEECHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
DNDYEKYKNYIVLELSQEDKYFKV
CCCHHHHCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MKLLKLTTKVDGCIIREIEFKDTLNIITNKRDSSLSGNQIGKSVPGRIIDFLLDGSIGPI
CCEEEEECCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCE
YIDEEFDTAEPHIHKLFNEHNVTCTLAYIGLDGNIAEIKRNLAIESTDRSYYVNDEVKSK
EECCCCCCCCHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHCEEEECCCCEEECCHHHHH
KEYNNHILNTMFNVYSDKPTLRKLAPKFLRTDTHRMTKTVKFNDDKFKISQADRNTLFLY
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHEEEEECCCEEEEECCCCCEEEEE
LFNFGDTEILSAIQSIKTFLSNYDNKLKSFNGIIKDDKILSTINSTQKELRKLERSLLLS
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
ENNIDKLAIIGEINHIDNEQNKLSNQILSLDLKVNNIKKTQKLLESNKNHQLLSELETIY
CCCCCEEEEEEECHHCCCHHHHHHHHHEEEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHH
GYASVKLGAVINDYDNVLKFHNYLVETKTEFVTDGLDKLEDQLLDNTLKLKALEQNKSSL
HHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHEEHHHHHHHHHH
YHELKSKKKIEEISESVKTIGELNKTLIELNAIVEKKNSIEDRLKKETERLEGLSGRLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ELQNVHIFETEFKKHFKAYTNTFYGVEYNFNLNLDATNGNCQPTVDDIQSNNDGGLKRLE
HHHCCEEEHHHHHHHHHHHHCCEEEEEEEEEEEEECCCCCCCCCHHHHCCCCCCCCEEEE
VITFDLSYIKTVDSLGLKRPTFVVHDSIDEVDIKHIRQLFDESIKLSGQQVVSMLVSQLE
EEEECHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
DNDYEKYKNYIVLELSQEDKYFKV
CCCHHHHCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA