| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597192
Identifier: 120597192
GI number: 120597192
Start: 387050
End: 387598
Strand: Direct
Name: 120597192
Synonym: Sputw3181_0361
Alternate gene names: NA
Gene position: 387050-387598 (Clockwise)
Preceding gene: 120597191
Following gene: 120597193
Centisome position: 8.22
GC content: 38.25
Gene sequence:
>549_bases ATGACAGGAACGTTAGTTCAAATCCAAGAGGTGAACGGTGACTTCAATAACTCGGAGCCACCAGAGTCTAAGGTTGACTC TATCATCAATGACGTCATTAGCGAGCTCTCACAAGTTCAAGTTACTATAGACATCAAGGATCGTACATTTCCCTCTAAAG TCTCTAAGAAGATCAAACATAATCAGTTGAGGAACAATAGAAGCATTGTTCTAAAGTACAAGAGCTATTCATCACATATT GAGTCTGCGTATGGTACGGTTGAGAAGAACATTGTTAATGGTAAACAAACGGCTTTGCTGATTCTTCATGATATGTATGA AAAAGCACTACATAAGTTCAACATCGATGTTTGGGAACCTGACATGGACGCTATTAAGCAACATGCAGACGGAATAATAG ATGATATCAGAACTCAACTAACAAAATTCCTGTACAAGTCTTCAAACATCAATTTCACCAAAGAACAGATGGCTCTTGGA GTTGACATAGTAATTGCTCATGCTTTTGTTGAGTGTTACGTGTTGGAGAACCCTAATGATACTGACTAA
Upstream 100 bases:
>100_bases CTAAAGCCGTGGCCAAATTTAGTTGACCACTTCAAACATCAATACAGGTGTATTGAATGGTAACTTCAATCTCAATCAAT GAGATAGGTAAAGTAAAGGT
Downstream 100 bases:
>100_bases AGGTGCTAATCCAGAAATCAACGTTGTCTATATTGGAGCATTCGTAATAAAACGACTTCAAGAGTCAAGAGGTCGTAAAA TGAAGATTACTCGCCTAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MTGTLVQIQEVNGDFNNSEPPESKVDSIINDVISELSQVQVTIDIKDRTFPSKVSKKIKHNQLRNNRSIVLKYKSYSSHI ESAYGTVEKNIVNGKQTALLILHDMYEKALHKFNIDVWEPDMDAIKQHADGIIDDIRTQLTKFLYKSSNINFTKEQMALG VDIVIAHAFVECYVLENPNDTD
Sequences:
>Translated_182_residues MTGTLVQIQEVNGDFNNSEPPESKVDSIINDVISELSQVQVTIDIKDRTFPSKVSKKIKHNQLRNNRSIVLKYKSYSSHI ESAYGTVEKNIVNGKQTALLILHDMYEKALHKFNIDVWEPDMDAIKQHADGIIDDIRTQLTKFLYKSSNINFTKEQMALG VDIVIAHAFVECYVLENPNDTD >Mature_181_residues TGTLVQIQEVNGDFNNSEPPESKVDSIINDVISELSQVQVTIDIKDRTFPSKVSKKIKHNQLRNNRSIVLKYKSYSSHIE SAYGTVEKNIVNGKQTALLILHDMYEKALHKFNIDVWEPDMDAIKQHADGIIDDIRTQLTKFLYKSSNINFTKEQMALGV DIVIAHAFVECYVLENPNDTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20712; Mature: 20580
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTLVQIQEVNGDFNNSEPPESKVDSIINDVISELSQVQVTIDIKDRTFPSKVSKKIKH CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHH NQLRNNRSIVLKYKSYSSHIESAYGTVEKNIVNGKQTALLILHDMYEKALHKFNIDVWEP HHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC DMDAIKQHADGIIDDIRTQLTKFLYKSSNINFTKEQMALGVDIVIAHAFVECYVLENPND CHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCC TD CC >Mature Secondary Structure TGTLVQIQEVNGDFNNSEPPESKVDSIINDVISELSQVQVTIDIKDRTFPSKVSKKIKH CCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHH NQLRNNRSIVLKYKSYSSHIESAYGTVEKNIVNGKQTALLILHDMYEKALHKFNIDVWEP HHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC DMDAIKQHADGIIDDIRTQLTKFLYKSSNINFTKEQMALGVDIVIAHAFVECYVLENPND CHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEECCCCC TD CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA