| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is 120597186
Identifier: 120597186
GI number: 120597186
Start: 383202
End: 383534
Strand: Direct
Name: 120597186
Synonym: Sputw3181_0355
Alternate gene names: NA
Gene position: 383202-383534 (Clockwise)
Preceding gene: 120597185
Following gene: 120597187
Centisome position: 8.14
GC content: 37.54
Gene sequence:
>333_bases ATGAAAAAATTGATAACAGTTGTCGCCCTATGTGGCCTATTAATGAATGGTAGTGCTTTAGCCCATGCTGATCATGGTGT GATTAGTGGGCAAGGTGCAATAAAGGTTGCCGCTAAGTCACTCAATCAAATGACATTTAAAGACTTTGGTTTTGAGGTAG GTAAATTAGATGGCTCATGGAAAGAGGTACCTGAATCACAATTATCCATTGTGACCTTTGAAGGTAATTTTTATGTAATA AGCGCTGTTAACCCCACCACTAAAAAACAGGTCTTTCTGAAAATCGCCAGTAACGGTGAATTATTGGAAGTTAAAGATAC AAACAAGTTCTAA
Upstream 100 bases:
>100_bases AAAAATAAATCGGATAAACCGATAGCCGTACAGCTACTGGTTAAAGGGCAGTATGACGTCATTGGCCTTAAATAATAATT GACATAATTTGGAGAATGCT
Downstream 100 bases:
>100_bases TATCCCGATATGATGCTGTCTAGTACGCATTAGACAGTGCCATAGATATCCCTCTTGAATATATATTTTCACTTATTGTT AGATCGAGCATTGCCATACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MKKLITVVALCGLLMNGSALAHADHGVISGQGAIKVAAKSLNQMTFKDFGFEVGKLDGSWKEVPESQLSIVTFEGNFYVI SAVNPTTKKQVFLKIASNGELLEVKDTNKF
Sequences:
>Translated_110_residues MKKLITVVALCGLLMNGSALAHADHGVISGQGAIKVAAKSLNQMTFKDFGFEVGKLDGSWKEVPESQLSIVTFEGNFYVI SAVNPTTKKQVFLKIASNGELLEVKDTNKF >Mature_110_residues MKKLITVVALCGLLMNGSALAHADHGVISGQGAIKVAAKSLNQMTFKDFGFEVGKLDGSWKEVPESQLSIVTFEGNFYVI SAVNPTTKKQVFLKIASNGELLEVKDTNKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11861; Mature: 11861
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLITVVALCGLLMNGSALAHADHGVISGQGAIKVAAKSLNQMTFKDFGFEVGKLDGSW CHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCEEEEHHHHHHCCHHHCCEEEECCCCCH KEVPESQLSIVTFEGNFYVISAVNPTTKKQVFLKIASNGELLEVKDTNKF HHCCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCC >Mature Secondary Structure MKKLITVVALCGLLMNGSALAHADHGVISGQGAIKVAAKSLNQMTFKDFGFEVGKLDGSW CHHHHHHHHHHHHHHCCCEEEECCCCEEECCCCEEEEHHHHHHCCHHHCCEEEECCCCCH KEVPESQLSIVTFEGNFYVISAVNPTTKKQVFLKIASNGELLEVKDTNKF HHCCCCCEEEEEECCCEEEEEECCCCCCEEEEEEECCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA