Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120596947

Identifier: 120596947

GI number: 120596947

Start: 140789

End: 141535

Strand: Direct

Name: 120596947

Synonym: Sputw3181_0114

Alternate gene names: NA

Gene position: 140789-141535 (Clockwise)

Preceding gene: 120596946

Following gene: 120596948

Centisome position: 2.99

GC content: 40.16

Gene sequence:

>747_bases
ATGGACGCTAAACAGGCGCTATCAAATGCCAATACGGCATCTACGTTAAAAGAGGTTATTCAGGCAATAACGGCAGCTTT
GAAGCTGCACGGTTTTAGTGGATTCTGGTTTCAAGGAGTCCCTCATTGCGCGTATGAAAACTATCACTTTCCAAAAGAAA
CCAATCTGTTCTCACAAGCTTCGCTGCGTAAACCTAATGCCAGCGTAGCTTCATCACCTGTAGTTGCTGAACTGCAGCGT
TTTTATCTAAGTCAGGTTGCCGCTAATGATTTTAATTTTGGTTTTTCGTTAGATACTTCAAAATCTTATATGTATCGCTT
GTCGTGTGATAAAAGTGATAAAGCTAGCCTACTTTTTAGTAAGCATCATATTCAAACCGTATTAAGTTGGCCCGTTACAT
GTCATAGCAATCGACATTGGGCGGGTCGTTTTATATTGCTGAGTCATCTGAGTGATTCAGACATCCTATTAACGGGTTTG
AGTGCAACCTTAAAAGAGGCTCAAAACAAGCTATTTGAATGTAATAAGCCATTGTTTAATCCATTTCTTCAAAGTTCTCT
ACTTAAAGATAATGCGAGAGATATCTTACTTATGGTCGCAAACGGCCTGCAGAATGACGAAATTTCAACTCAGCTCCCGA
TAAGTATCAGAGGCGTTGAATACCATATGGAATCAATGCGTAGGAAGTTTGGGGCGACGAATCGAGCAAACTTAATTCAT
CTCGCCCATCAATATGAGTTGATCTAA

Upstream 100 bases:

>100_bases
AGTTTTAATTTTGCGATCAAATGTAAGTATATGTATCTGTGAGTTTTGTTTATTGTTTGTATTGAGATACCTTCTAATAT
CATTTTGTTTGGGGGTATTT

Downstream 100 bases:

>100_bases
ATATGTTGGTATTACTGGTTGAAGACAATCGGCTTCTCTCTAACAATATCATTCAATATCTTGAATTGAGTGGCATAGAG
TGCGATTACGCGTTCAACCT

Product: response regulator receiver protein

Products: NA

Alternate protein names: Response Regulator Receiver Protein

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MDAKQALSNANTASTLKEVIQAITAALKLHGFSGFWFQGVPHCAYENYHFPKETNLFSQASLRKPNASVASSPVVAELQR
FYLSQVAANDFNFGFSLDTSKSYMYRLSCDKSDKASLLFSKHHIQTVLSWPVTCHSNRHWAGRFILLSHLSDSDILLTGL
SATLKEAQNKLFECNKPLFNPFLQSSLLKDNARDILLMVANGLQNDEISTQLPISIRGVEYHMESMRRKFGATNRANLIH
LAHQYELI

Sequences:

>Translated_248_residues
MDAKQALSNANTASTLKEVIQAITAALKLHGFSGFWFQGVPHCAYENYHFPKETNLFSQASLRKPNASVASSPVVAELQR
FYLSQVAANDFNFGFSLDTSKSYMYRLSCDKSDKASLLFSKHHIQTVLSWPVTCHSNRHWAGRFILLSHLSDSDILLTGL
SATLKEAQNKLFECNKPLFNPFLQSSLLKDNARDILLMVANGLQNDEISTQLPISIRGVEYHMESMRRKFGATNRANLIH
LAHQYELI
>Mature_248_residues
MDAKQALSNANTASTLKEVIQAITAALKLHGFSGFWFQGVPHCAYENYHFPKETNLFSQASLRKPNASVASSPVVAELQR
FYLSQVAANDFNFGFSLDTSKSYMYRLSCDKSDKASLLFSKHHIQTVLSWPVTCHSNRHWAGRFILLSHLSDSDILLTGL
SATLKEAQNKLFECNKPLFNPFLQSSLLKDNARDILLMVANGLQNDEISTQLPISIRGVEYHMESMRRKFGATNRANLIH
LAHQYELI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27911; Mature: 27911

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAKQALSNANTASTLKEVIQAITAALKLHGFSGFWFQGVPHCAYENYHFPKETNLFSQA
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHCCCCCCCCCCCCHHHH
SLRKPNASVASSPVVAELQRFYLSQVAANDFNFGFSLDTSKSYMYRLSCDKSDKASLLFS
HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCCCHHHHHH
KHHIQTVLSWPVTCHSNRHWAGRFILLSHLSDSDILLTGLSATLKEAQNKLFECNKPLFN
HHHHHHHHHCCEEECCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHH
PFLQSSLLKDNARDILLMVANGLQNDEISTQLPISIRGVEYHMESMRRKFGATNRANLIH
HHHHHHHHHCCCHHEEEEEECCCCCCCCCEECCEEEEHHHHHHHHHHHHHCCCCCCCEEE
LAHQYELI
EHHHHCCC
>Mature Secondary Structure
MDAKQALSNANTASTLKEVIQAITAALKLHGFSGFWFQGVPHCAYENYHFPKETNLFSQA
CCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHCCCCCCCCCCCCHHHH
SLRKPNASVASSPVVAELQRFYLSQVAANDFNFGFSLDTSKSYMYRLSCDKSDKASLLFS
HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCCCHHHHHH
KHHIQTVLSWPVTCHSNRHWAGRFILLSHLSDSDILLTGLSATLKEAQNKLFECNKPLFN
HHHHHHHHHCCEEECCCCCCCCEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHH
PFLQSSLLKDNARDILLMVANGLQNDEISTQLPISIRGVEYHMESMRRKFGATNRANLIH
HHHHHHHHHCCCHHEEEEEECCCCCCCCCEECCEEEEHHHHHHHHHHHHHCCCCCCCEEE
LAHQYELI
EHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA