| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is add [H]
Identifier: 120596871
GI number: 120596871
Start: 49575
End: 50570
Strand: Direct
Name: add [H]
Synonym: Sputw3181_0038
Alternate gene names: 120596871
Gene position: 49575-50570 (Clockwise)
Preceding gene: 120596868
Following gene: 120596877
Centisome position: 1.05
GC content: 46.59
Gene sequence:
>996_bases ATGATTGATACATCTATTCCATTGGTGGATCTGCATCGTCACCTAGACGGTAATGTGCGGGTAAATACCATTTGGGAACT AGGACACCAACACGGCATTGCGCTACCTGCCGATTCTTTAGAGACGCTCGCACCTTTTGTGCAAATTCAGGGGAAAGAAA CTAGCTTAGTCGCCTTCTTAAAGAAACTCGATTGGATGGTTGCCGTACTCGCTGATTTGGATGCGGTGAAACGCGTCGCC TATGAAAACGTTGCCGATGCGGCGTTATCTGGCTTAGATTACGCTGAGTTACGTTTTAGTCCTTACTATATGGCGATGAA CCATAAGTTACCGATTGAAGGCGTAGTTGAGGCGGTAGTTGACGGCGTTAAAGCGGGTTTAAAAGACTATAACGTGAAGA TCAATTTAATTGGCATTATGTCACGTTCATTTGGTCAAGCAGCTTGTACTCAAGAACTTGAAGGCTTACTTGCCCATAAA CAACATCTCGTGGCGATGGACTTGGCAGGTGATGAATTGGGTTTCCCAGGTGAGTTATTTAACGATCACTTTAAACGTGT TCGTGATGCTGGCCTTGCGATTACGGCTCACGCCGGTGAAGCTGCGGGCTCACAAAGTATGTGGCAAGCGATTCAAGAAC TAGGCGCTACGCGAATTGGCCACGGGGTGAACGCGATTCACGATCCTAGGCTGATGGAATATCTCGCTAAGCACCGTATT GGCATCGAATCTTGCCCGACCAGTAACTTGCATACTTCTACAGTGGTTTCTTACGCTGAGCATCCATTCAGAACCTTTAT GGATGCAGGCGTGTTGATAAGCCTAAATACCGATGATCCTGGTGTGAGTGCTATCGATATTAAGCATGAGTATCGTATCG CTAAATCTGAACTCAAGTTAACCGATGCTGAGTTAGCGCAGGTGCAACGCAACGGGGTTGAAATGGCATTTTTATCCGAT AGTGAGCGCAAAGCACTCTATGCCGCTAAGGTATAA
Upstream 100 bases:
>100_bases TCTGGTCCATAAATGCCCCTGAAAATGCGTGTTAAACTTAGTGTCCGCCCGCGACCAAATAACAAAAGCATTGGCTGGGT AGTTCAAATAGGGGTTAAAT
Downstream 100 bases:
>100_bases GTCGATTCTGAGTCGTTAATAAAAATTGCCATCAATAAAAAATCCGACTTAGAGTCGGATTTTTTGTGCAGCACTTGTGA GTACGGCAAAGAGCCTTTAG
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MIDTSIPLVDLHRHLDGNVRVNTIWELGHQHGIALPADSLETLAPFVQIQGKETSLVAFLKKLDWMVAVLADLDAVKRVA YENVADAALSGLDYAELRFSPYYMAMNHKLPIEGVVEAVVDGVKAGLKDYNVKINLIGIMSRSFGQAACTQELEGLLAHK QHLVAMDLAGDELGFPGELFNDHFKRVRDAGLAITAHAGEAAGSQSMWQAIQELGATRIGHGVNAIHDPRLMEYLAKHRI GIESCPTSNLHTSTVVSYAEHPFRTFMDAGVLISLNTDDPGVSAIDIKHEYRIAKSELKLTDAELAQVQRNGVEMAFLSD SERKALYAAKV
Sequences:
>Translated_331_residues MIDTSIPLVDLHRHLDGNVRVNTIWELGHQHGIALPADSLETLAPFVQIQGKETSLVAFLKKLDWMVAVLADLDAVKRVA YENVADAALSGLDYAELRFSPYYMAMNHKLPIEGVVEAVVDGVKAGLKDYNVKINLIGIMSRSFGQAACTQELEGLLAHK QHLVAMDLAGDELGFPGELFNDHFKRVRDAGLAITAHAGEAAGSQSMWQAIQELGATRIGHGVNAIHDPRLMEYLAKHRI GIESCPTSNLHTSTVVSYAEHPFRTFMDAGVLISLNTDDPGVSAIDIKHEYRIAKSELKLTDAELAQVQRNGVEMAFLSD SERKALYAAKV >Mature_331_residues MIDTSIPLVDLHRHLDGNVRVNTIWELGHQHGIALPADSLETLAPFVQIQGKETSLVAFLKKLDWMVAVLADLDAVKRVA YENVADAALSGLDYAELRFSPYYMAMNHKLPIEGVVEAVVDGVKAGLKDYNVKINLIGIMSRSFGQAACTQELEGLLAHK QHLVAMDLAGDELGFPGELFNDHFKRVRDAGLAITAHAGEAAGSQSMWQAIQELGATRIGHGVNAIHDPRLMEYLAKHRI GIESCPTSNLHTSTVVSYAEHPFRTFMDAGVLISLNTDDPGVSAIDIKHEYRIAKSELKLTDAELAQVQRNGVEMAFLSD SERKALYAAKV
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=338, Percent_Identity=32.5443786982249, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI226693318, Length=334, Percent_Identity=23.0538922155689, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1787910, Length=326, Percent_Identity=61.9631901840491, Blast_Score=426, Evalue=1e-120, Organism=Caenorhabditis elegans, GI32565969, Length=334, Percent_Identity=29.6407185628743, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17538512, Length=334, Percent_Identity=29.6407185628743, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI115537133, Length=325, Percent_Identity=25.2307692307692, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324188, Length=326, Percent_Identity=24.2331288343558, Blast_Score=100, Evalue=4e-22, Organism=Drosophila melanogaster, GI24645260, Length=327, Percent_Identity=24.7706422018349, Blast_Score=97, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 36218; Mature: 36218
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00485 A_DEAMINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTSIPLVDLHRHLDGNVRVNTIWELGHQHGIALPADSLETLAPFVQIQGKETSLVAFL CCCCCCCHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCHHHHHHH KKLDWMVAVLADLDAVKRVAYENVADAALSGLDYAELRFSPYYMAMNHKLPIEGVVEAVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCHHHHHHHHH DGVKAGLKDYNVKINLIGIMSRSFGQAACTQELEGLLAHKQHLVAMDLAGDELGFPGELF HHHHHCCHHCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHH NDHFKRVRDAGLAITAHAGEAAGSQSMWQAIQELGATRIGHGVNAIHDPRLMEYLAKHRI HHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHCC GIESCPTSNLHTSTVVSYAEHPFRTFMDAGVLISLNTDDPGVSAIDIKHEYRIAKSELKL CCCCCCCCCCCHHHHHHHHHCHHHHHHCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHC TDAELAQVQRNGVEMAFLSDSERKALYAAKV CHHHHHHHHHCCCEEEEECCCCCCEEEEECC >Mature Secondary Structure MIDTSIPLVDLHRHLDGNVRVNTIWELGHQHGIALPADSLETLAPFVQIQGKETSLVAFL CCCCCCCHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCHHHHHHH KKLDWMVAVLADLDAVKRVAYENVADAALSGLDYAELRFSPYYMAMNHKLPIEGVVEAVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCCCHHHHHHHHH DGVKAGLKDYNVKINLIGIMSRSFGQAACTQELEGLLAHKQHLVAMDLAGDELGFPGELF HHHHHCCHHCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHH NDHFKRVRDAGLAITAHAGEAAGSQSMWQAIQELGATRIGHGVNAIHDPRLMEYLAKHRI HHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHCC GIESCPTSNLHTSTVVSYAEHPFRTFMDAGVLISLNTDDPGVSAIDIKHEYRIAKSELKL CCCCCCCCCCCHHHHHHHHHCHHHHHHCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHC TDAELAQVQRNGVEMAFLSDSERKALYAAKV CHHHHHHHHHCCCEEEEECCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA