| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is mnmG
Identifier: 119947334
GI number: 119947334
Start: 4556369
End: 4558258
Strand: Reverse
Name: mnmG
Synonym: Ping_3741
Alternate gene names: 119947334
Gene position: 4558258-4556369 (Counterclockwise)
Preceding gene: 119947335
Following gene: 119947333
Centisome position: 99.97
GC content: 40.05
Gene sequence:
>1890_bases ATGAATTACCACGAACATTTTGACGTAATTGTTATTGGCGGAGGCCATGCAGGAACTGAAGCCGCTGCTGCCGCTGCTCG TATGGGCATGAATACTTTATTATTAACCCATAATATTGAAACATTAGGTCAAATGTCCTGTAACCCCGCCATTGGTGGGA TTGGTAAAGGACACCTAGTCAGAGAAATTGATGCACTAGGTGGTCTAATGGCAAACGCCGCAGACAAAGCAGGTATTCAA TTTAGAATACTTAATGGCAGTAAAGGACCCGCCGTGAGAGCAACACGGGCACAGGCTGATCGTCTGTTATATAAAGCGGC GATACGAGAAAAGCTAGAAAACCAGGAAAACCTAAAAATATTTCAACAAGAAGTGGAAGATCTTGTTGTCGAAAACGATC GAGTTAGCGGTGTTGTGACTAAAATGGGCATTAAATTTTCCGCAAAAACCGTTGTGTTGACGGTTGGTACTTTCTTAAAT GGGCAAATCCATGTTGGCCTAAAAAATCATAGTGGTGGCCGGGCAGGTGATTCCGCTTCAATCGGTTTAGCGCAGCGCTT AAGAGAGCTACCGTTACGTACTGGACGTTTAAAAACGGGTACACCTGCACGTATAGATTCCCGCAGTATTGATTTTTCAG CATTAGAAGTTCAGCACGGTGATAACCCCACGCCTGTCTTTTCATTCTTGGGCGATCGTAGTGAGCATCCTAGACAAATT CCTTGTTATATCACGCACACTAATGAAAAAACACACGATATTATCCGTCGTAATTTAGACCGAAGCCCTATGTATTCAGG GGTTATTGAAGGTGTTGGTCCGCGTTATTGTCCTTCTATTGAAGACAAAGTAATGCGTTTTGCCGATAAAAATTCTCATC AAATATTTGTTGAACCGGAAGGCTTAACAACCAATGAAATTTATCCGAATGGGATATCTACAAGTTTACCCTTTGACGTA CAAATTGATTTTATTCGTTCAATGAAAGGTTTTGAAAACGCATTTGTGACTAGACCTGGCTATGCTATTGAATACGATTA TTTTGATCCTCGCGATCTAAAGTCAACGTTGGAAAGTAAATATATTGATGGTTTATTCTTTGCGGGCCAGATTAATGGCA CAACGGGTTACGAAGAAGCAGCCGCTCAAGGTTTACTAGCAGGCATGAATGCAGGTTTAATGGTACAGGATAAAGAGGGA TGGTGCCCAGGTCGTGATCAAGCTTATGCCGGTGTACTCGTCGATGATCTTTCTACTCTGGGTACAAAAGAGCCCTATCG CATGTTTACCAGTCGTGCTGAATATCGCCTGTTGTTACGTGAAGATAATGCCGATACTCGATTAACAGAAAAAGGGCGTG AATTGGGTCTTGTTGATGATATTCGCTGGAAAGCATTTAGCATGAAACAAGAATCCGTAGAAACAGAAATTCAACGATTA AAAAATCAATGGATACACCCTAAATCAGAAAATGCTTCGCAAATAAATGCGTTATTAAAAACACCAATGCAGCGTGAAAG TACGCTTGAAGGAATGATTCGTCGACCTGAAGTGAATTATCAAAGTTTAATCTCAATTGAAGGATTAGGGCCAGTACTCG AAAATGTTCAAGCTGCTGAGCAAGTTGAAATTATAATCAAATACCAAGGTTACGTAGATCGTCAGCGCGAAGAAATAGAA AAACTTAAACGTAATGAAGATACATTATTGCCTATTCATCTGGATTATTCGGATATTAAAGGTTTATCAAATGAAGTGAC GGCTAAATTAAATGATACTAAGCCCGAAAATATTGGTCAAGCTTCCAGAATTTCAGGAATAACACCAGCTGCAATATCTA TATTATTAATTTATATAAAGAAAAATGCGCTAAGACGTAAGGTTTTATAA
Upstream 100 bases:
>100_bases ATAATACTAATACTATTGTTTTGATCTTATCTGTTTTCCTTTAGGCAAGAAAAGAGTAAAATCCCTTTTGTCTTTTTAAC TTATAGTTTTGGAAAAATGA
Downstream 100 bases:
>100_bases ATGAGTCTGCTTGAAAATTTGCAAAAATTAATTGATCAAACTTCACTTGAAGTGACTGATCAACAAAAGCAACAGTTAGT GCAGTTGGTCGAGTTATTAA
Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
Products: NA
Alternate protein names: Glucose-inhibited division protein A
Number of amino acids: Translated: 629; Mature: 629
Protein sequence:
>629_residues MNYHEHFDVIVIGGGHAGTEAAAAAARMGMNTLLLTHNIETLGQMSCNPAIGGIGKGHLVREIDALGGLMANAADKAGIQ FRILNGSKGPAVRATRAQADRLLYKAAIREKLENQENLKIFQQEVEDLVVENDRVSGVVTKMGIKFSAKTVVLTVGTFLN GQIHVGLKNHSGGRAGDSASIGLAQRLRELPLRTGRLKTGTPARIDSRSIDFSALEVQHGDNPTPVFSFLGDRSEHPRQI PCYITHTNEKTHDIIRRNLDRSPMYSGVIEGVGPRYCPSIEDKVMRFADKNSHQIFVEPEGLTTNEIYPNGISTSLPFDV QIDFIRSMKGFENAFVTRPGYAIEYDYFDPRDLKSTLESKYIDGLFFAGQINGTTGYEEAAAQGLLAGMNAGLMVQDKEG WCPGRDQAYAGVLVDDLSTLGTKEPYRMFTSRAEYRLLLREDNADTRLTEKGRELGLVDDIRWKAFSMKQESVETEIQRL KNQWIHPKSENASQINALLKTPMQRESTLEGMIRRPEVNYQSLISIEGLGPVLENVQAAEQVEIIIKYQGYVDRQREEIE KLKRNEDTLLPIHLDYSDIKGLSNEVTAKLNDTKPENIGQASRISGITPAAISILLIYIKKNALRRKVL
Sequences:
>Translated_629_residues MNYHEHFDVIVIGGGHAGTEAAAAAARMGMNTLLLTHNIETLGQMSCNPAIGGIGKGHLVREIDALGGLMANAADKAGIQ FRILNGSKGPAVRATRAQADRLLYKAAIREKLENQENLKIFQQEVEDLVVENDRVSGVVTKMGIKFSAKTVVLTVGTFLN GQIHVGLKNHSGGRAGDSASIGLAQRLRELPLRTGRLKTGTPARIDSRSIDFSALEVQHGDNPTPVFSFLGDRSEHPRQI PCYITHTNEKTHDIIRRNLDRSPMYSGVIEGVGPRYCPSIEDKVMRFADKNSHQIFVEPEGLTTNEIYPNGISTSLPFDV QIDFIRSMKGFENAFVTRPGYAIEYDYFDPRDLKSTLESKYIDGLFFAGQINGTTGYEEAAAQGLLAGMNAGLMVQDKEG WCPGRDQAYAGVLVDDLSTLGTKEPYRMFTSRAEYRLLLREDNADTRLTEKGRELGLVDDIRWKAFSMKQESVETEIQRL KNQWIHPKSENASQINALLKTPMQRESTLEGMIRRPEVNYQSLISIEGLGPVLENVQAAEQVEIIIKYQGYVDRQREEIE KLKRNEDTLLPIHLDYSDIKGLSNEVTAKLNDTKPENIGQASRISGITPAAISILLIYIKKNALRRKVL >Mature_629_residues MNYHEHFDVIVIGGGHAGTEAAAAAARMGMNTLLLTHNIETLGQMSCNPAIGGIGKGHLVREIDALGGLMANAADKAGIQ FRILNGSKGPAVRATRAQADRLLYKAAIREKLENQENLKIFQQEVEDLVVENDRVSGVVTKMGIKFSAKTVVLTVGTFLN GQIHVGLKNHSGGRAGDSASIGLAQRLRELPLRTGRLKTGTPARIDSRSIDFSALEVQHGDNPTPVFSFLGDRSEHPRQI PCYITHTNEKTHDIIRRNLDRSPMYSGVIEGVGPRYCPSIEDKVMRFADKNSHQIFVEPEGLTTNEIYPNGISTSLPFDV QIDFIRSMKGFENAFVTRPGYAIEYDYFDPRDLKSTLESKYIDGLFFAGQINGTTGYEEAAAQGLLAGMNAGLMVQDKEG WCPGRDQAYAGVLVDDLSTLGTKEPYRMFTSRAEYRLLLREDNADTRLTEKGRELGLVDDIRWKAFSMKQESVETEIQRL KNQWIHPKSENASQINALLKTPMQRESTLEGMIRRPEVNYQSLISIEGLGPVLENVQAAEQVEIIIKYQGYVDRQREEIE KLKRNEDTLLPIHLDYSDIKGLSNEVTAKLNDTKPENIGQASRISGITPAAISILLIYIKKNALRRKVL
Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34
COG id: COG0445
COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MnmG family
Homologues:
Organism=Homo sapiens, GI74024895, Length=640, Percent_Identity=46.5625, Blast_Score=522, Evalue=1e-148, Organism=Homo sapiens, GI19882217, Length=665, Percent_Identity=44.812030075188, Blast_Score=508, Evalue=1e-144, Organism=Homo sapiens, GI183227703, Length=680, Percent_Identity=43.8235294117647, Blast_Score=502, Evalue=1e-142, Organism=Escherichia coli, GI2367273, Length=627, Percent_Identity=73.8437001594896, Blast_Score=979, Evalue=0.0, Organism=Caenorhabditis elegans, GI17534255, Length=631, Percent_Identity=41.5213946117274, Blast_Score=475, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6321202, Length=630, Percent_Identity=44.7619047619048, Blast_Score=511, Evalue=1e-145, Organism=Drosophila melanogaster, GI24658174, Length=637, Percent_Identity=46.3108320251177, Blast_Score=520, Evalue=1e-147,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MNMG_PSYIN (A1T100)
Other databases:
- EMBL: CP000510 - RefSeq: YP_945014.1 - ProteinModelPortal: A1T100 - SMR: A1T100 - STRING: A1T100 - GeneID: 4624830 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_3741 - eggNOG: COG0445 - HOGENOM: HBG284774 - OMA: GIQFRVL - PhylomeDB: A1T100 - ProtClustDB: PRK05192 - BioCyc: PING357804:PING_3741-MONOMER - GO: GO:0005737 - HAMAP: MF_00129 - InterPro: IPR004416 - InterPro: IPR002218 - InterPro: IPR020595 - TIGRFAMs: TIGR00136
Pfam domain/function: PF01134 GIDA
EC number: NA
Molecular weight: Translated: 69870; Mature: 69870
Theoretical pI: Translated: 6.89; Mature: 6.89
Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2
Important sites: BINDING 125-125 BINDING 180-180 BINDING 370-370
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYHEHFDVIVIGGGHAGTEAAAAAARMGMNTLLLTHNIETLGQMSCNPAIGGIGKGHLV CCCCCEEEEEEEECCCCCHHHHHHHHHHCCEEEEEEECHHHHHCCCCCCCCCCCCCCHHH REIDALGGLMANAADKAGIQFRILNGSKGPAVRATRAQADRLLYKAAIREKLENQENLKI HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHH FQQEVEDLVVENDRVSGVVTKMGIKFSAKTVVLTVGTFLNGQIHVGLKNHSGGRAGDSAS HHHHHHHHHHCCCCCCEEHHHHCCEEECCEEEEEEECEECCEEEEEEECCCCCCCCCCCH IGLAQRLRELPLRTGRLKTGTPARIDSRSIDFSALEVQHGDNPTPVFSFLGDRSEHPRQI HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCC PCYITHTNEKTHDIIRRNLDRSPMYSGVIEGVGPRYCPSIEDKVMRFADKNSHQIFVEPE CEEEEECCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCC GLTTNEIYPNGISTSLPFDVQIDFIRSMKGFENAFVTRPGYAIEYDYFDPRDLKSTLESK CCCCCCCCCCCCCCCCCCEEEHHHHHHHCCHHHHEEECCCCEEEECCCCHHHHHHHHHHH YIDGLFFAGQINGTTGYEEAAAQGLLAGMNAGLMVQDKEGWCPGRDQAYAGVLVDDLSTL HHCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH GTKEPYRMFTSRAEYRLLLREDNADTRLTEKGRELGLVDDIRWKAFSMKQESVETEIQRL CCCCHHHHHHCCCCEEEEEEECCCCCHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH KNQWIHPKSENASQINALLKTPMQRESTLEGMIRRPEVNYQSLISIEGLGPVLENVQAAE HHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHEEEECCCCHHHHHHHHHC QVEIIIKYQGYVDRQREEIEKLKRNEDTLLPIHLDYSDIKGLSNEVTAKLNDTKPENIGQ EEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECHHHHCCCCCCEEEEECCCCCCCCCC ASRISGITPAAISILLIYIKKNALRRKVL HHHCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNYHEHFDVIVIGGGHAGTEAAAAAARMGMNTLLLTHNIETLGQMSCNPAIGGIGKGHLV CCCCCEEEEEEEECCCCCHHHHHHHHHHCCEEEEEEECHHHHHCCCCCCCCCCCCCCHHH REIDALGGLMANAADKAGIQFRILNGSKGPAVRATRAQADRLLYKAAIREKLENQENLKI HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHH FQQEVEDLVVENDRVSGVVTKMGIKFSAKTVVLTVGTFLNGQIHVGLKNHSGGRAGDSAS HHHHHHHHHHCCCCCCEEHHHHCCEEECCEEEEEEECEECCEEEEEEECCCCCCCCCCCH IGLAQRLRELPLRTGRLKTGTPARIDSRSIDFSALEVQHGDNPTPVFSFLGDRSEHPRQI HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHCCCCCCCCCC PCYITHTNEKTHDIIRRNLDRSPMYSGVIEGVGPRYCPSIEDKVMRFADKNSHQIFVEPE CEEEEECCCHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEECCC GLTTNEIYPNGISTSLPFDVQIDFIRSMKGFENAFVTRPGYAIEYDYFDPRDLKSTLESK CCCCCCCCCCCCCCCCCCEEEHHHHHHHCCHHHHEEECCCCEEEECCCCHHHHHHHHHHH YIDGLFFAGQINGTTGYEEAAAQGLLAGMNAGLMVQDKEGWCPGRDQAYAGVLVDDLSTL HHCCEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH GTKEPYRMFTSRAEYRLLLREDNADTRLTEKGRELGLVDDIRWKAFSMKQESVETEIQRL CCCCHHHHHHCCCCEEEEEEECCCCCHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH KNQWIHPKSENASQINALLKTPMQRESTLEGMIRRPEVNYQSLISIEGLGPVLENVQAAE HHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHEEEECCCCHHHHHHHHHC QVEIIIKYQGYVDRQREEIEKLKRNEDTLLPIHLDYSDIKGLSNEVTAKLNDTKPENIGQ EEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECHHHHCCCCCCEEEEECCCCCCCCCC ASRISGITPAAISILLIYIKKNALRRKVL HHHCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA