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The map label for this gene is gidB

Identifier: 119947333

GI number: 119947333

Start: 4555745

End: 4556368

Strand: Reverse

Name: gidB

Synonym: Ping_3740

Alternate gene names: 119947333

Gene position: 4556368-4555745 (Counterclockwise)

Preceding gene: 119947334

Following gene: 119947332

Centisome position: 99.93

GC content: 37.18

Gene sequence:

>624_bases
ATGAGTCTGCTTGAAAATTTGCAAAAATTAATTGATCAAACTTCACTTGAAGTGACTGATCAACAAAAGCAACAGTTAGT
GCAGTTGGTCGAGTTATTAAACAAGTGGAATAAAGCTTACAATCTCACTTCTGTAAGAGATCCTGAGCAAATGCTTGTTA
AACATATAATGGACAGTATAGTTGTATCACCCTATCTAATAGGAGAACGTTTCATTGACGTTGGTACCGGTCCAGGCTTA
CCTGGATTACCTTTAGCTATTCTAAATCCCGATAAACAATTTGTTTTATTAGATAGTCTGGGTAAACGCTTGCGATTTAT
TCGTCAAGCACTTTTGGAGTTGGGACTAAAAAATGTAACCGCAGTGCAGAGTCGGGTAGAAGAGTATCAGCCAGAGCATA
AATTTGACGTTGTTCTCAGCCGCGCATTTGCTTCACTTCATGATATGTTGTATTGGTGCAAACATTTACCCCATGAAGAA
GGACATTTTCTTGCTTTAAAGGGGCAATTTCCAGCGCAAGAAATAAAAGAACTAGATAAAGAGTTTGAATTTGTAGAATC
AATTTCATTACAAGTGCCAACACTTGAAGGCGAACGTTGCTTGGTTAAAATTAAACGTATTTAG

Upstream 100 bases:

>100_bases
TATTGGTCAAGCTTCCAGAATTTCAGGAATAACACCAGCTGCAATATCTATATTATTAATTTATATAAAGAAAAATGCGC
TAAGACGTAAGGTTTTATAA

Downstream 100 bases:

>100_bases
ATAATTAATCAGTATCTTCGGATTATAGATCGTTCAGTGACAACCGCTTAGCTCTGGTTCTGCCTTTTCAAGTCATTTGG
GTAGGGTATTCATTTTAATT

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MSLLENLQKLIDQTSLEVTDQQKQQLVQLVELLNKWNKAYNLTSVRDPEQMLVKHIMDSIVVSPYLIGERFIDVGTGPGL
PGLPLAILNPDKQFVLLDSLGKRLRFIRQALLELGLKNVTAVQSRVEEYQPEHKFDVVLSRAFASLHDMLYWCKHLPHEE
GHFLALKGQFPAQEIKELDKEFEFVESISLQVPTLEGERCLVKIKRI

Sequences:

>Translated_207_residues
MSLLENLQKLIDQTSLEVTDQQKQQLVQLVELLNKWNKAYNLTSVRDPEQMLVKHIMDSIVVSPYLIGERFIDVGTGPGL
PGLPLAILNPDKQFVLLDSLGKRLRFIRQALLELGLKNVTAVQSRVEEYQPEHKFDVVLSRAFASLHDMLYWCKHLPHEE
GHFLALKGQFPAQEIKELDKEFEFVESISLQVPTLEGERCLVKIKRI
>Mature_206_residues
SLLENLQKLIDQTSLEVTDQQKQQLVQLVELLNKWNKAYNLTSVRDPEQMLVKHIMDSIVVSPYLIGERFIDVGTGPGLP
GLPLAILNPDKQFVLLDSLGKRLRFIRQALLELGLKNVTAVQSRVEEYQPEHKFDVVLSRAFASLHDMLYWCKHLPHEEG
HFLALKGQFPAQEIKELDKEFEFVESISLQVPTLEGERCLVKIKRI

Specific function: Specifically methylates the N7 position of guanosine in position 527 of 16S rRNA

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family

Homologues:

Organism=Escherichia coli, GI1790179, Length=203, Percent_Identity=61.0837438423645, Blast_Score=257, Evalue=4e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMG_PSYIN (A1T0Z9)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_945013.1
- ProteinModelPortal:   A1T0Z9
- SMR:   A1T0Z9
- STRING:   A1T0Z9
- GeneID:   4624829
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_3740
- eggNOG:   COG0357
- HOGENOM:   HBG686577
- OMA:   HIMDSIV
- PhylomeDB:   A1T0Z9
- ProtClustDB:   PRK00107
- BioCyc:   PING357804:PING_3740-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00074
- InterPro:   IPR003682
- PIRSF:   PIRSF003078
- TIGRFAMs:   TIGR00138

Pfam domain/function: PF02527 GidB

EC number: =2.1.1.170

Molecular weight: Translated: 23784; Mature: 23653

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLENLQKLIDQTSLEVTDQQKQQLVQLVELLNKWNKAYNLTSVRDPEQMLVKHIMDSI
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
VVSPYLIGERFIDVGTGPGLPGLPLAILNPDKQFVLLDSLGKRLRFIRQALLELGLKNVT
HHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHH
AVQSRVEEYQPEHKFDVVLSRAFASLHDMLYWCKHLPHEEGHFLALKGQFPAQEIKELDK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHH
EFEFVESISLQVPTLEGERCLVKIKRI
HHHHHHHHHHCCCCCCCCHHHHEEECC
>Mature Secondary Structure 
SLLENLQKLIDQTSLEVTDQQKQQLVQLVELLNKWNKAYNLTSVRDPEQMLVKHIMDSI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
VVSPYLIGERFIDVGTGPGLPGLPLAILNPDKQFVLLDSLGKRLRFIRQALLELGLKNVT
HHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHH
AVQSRVEEYQPEHKFDVVLSRAFASLHDMLYWCKHLPHEEGHFLALKGQFPAQEIKELDK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHH
EFEFVESISLQVPTLEGERCLVKIKRI
HHHHHHHHHHCCCCCCCCHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA