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The map label for this gene is glyQ

Identifier: 119947320

GI number: 119947320

Start: 4544841

End: 4545749

Strand: Reverse

Name: glyQ

Synonym: Ping_3727

Alternate gene names: 119947320

Gene position: 4545749-4544841 (Counterclockwise)

Preceding gene: 119947322

Following gene: 119947319

Centisome position: 99.7

GC content: 44.0

Gene sequence:

>909_bases
ATGCAAAAATTCGATACTAAAACGTTTCAGGGGCTCATTCTTGCACTGCAAGATTTTTGGGCTCGCCAAGGTTGTGCCAT
TGTTCAACCGCTTGATATGGAAGTGGGTGCCGGTACATTTCATCCGCAAACATTTTTACGTTCAATTGGCCCTGAGCCAA
TGAACAGCGCCTATGTGCAACCCTGTCGTCGACCTACCGATGGTCGTTATGGTGAAAACCCAAACCGTCTGCAGCAATAC
TATCAATTCCAAGTGGTTTTAAAGCCGTCACCCAAAAATATTCAAGATCTTTACTTAAAGTCGCTTGAGGAAATCGGTAT
TGATACTTCCATTCATGATATCCGTTTTGTAGAGGATAACTGGGAATCACCCACGCTCGGCGCATGGGGACTTGGTTGGG
AGATTTGGTTAAACGGCATGGAGGTAACGCAGTTTACTTATTTCCAGCAAGTGGGTGGTTTAGAGTGCTCGCCGGTAACC
GGTGAAATAACCTATGGTCTGGAGCGTATTGCAATGTACGTGCAGGGTGTTGAAAGTATTTATGACCTTGTCTGGACTGA
CGGCCCGATGGGTAAATTGACTTACGGAGATATTTTCCATCAAAATGAAGTTGAACAATCAAGCTATAACTTTGAACATG
CCGATGTAGATGCTTTATTTAATCAATTTAATCAGTGTGAAAAAGACAGCCAAAAACTGATAGAAGCGGGACTCGCATTG
CCTGCCTATGAACAAGTAATGAAAGCATCTCATGCTTTTAATCTGCTCGATGCACGTCATGCCATCTCAGTCACCGAGCG
TCAGCGTTACATACTTCGTGTTCGTGCATTATCAAAAGCAGTCGCTGAAGCATATTACGGCAAGCGTGAAGCGCTTGGTT
TCCCACTTTGCAAAAACCTAGTTAAATAG

Upstream 100 bases:

>100_bases
TAACTTCAATATGAGATCATCTAACTGATTGGCATTGGTATAATAATCTACCATAGGTATAATGGCAGTCATTTTTCTAT
CATCAACTTAAGCCTAAATT

Downstream 100 bases:

>100_bases
AGGCAAGTTTCATGGCACAAGAAAATTTATTGATTGAACTGGGAACTGAAGAGTTACCGCCCAAATCACTGCGTCAACTT
GCTGAATCTTTTGCAAGTAA

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MQKFDTKTFQGLILALQDFWARQGCAIVQPLDMEVGAGTFHPQTFLRSIGPEPMNSAYVQPCRRPTDGRYGENPNRLQQY
YQFQVVLKPSPKNIQDLYLKSLEEIGIDTSIHDIRFVEDNWESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGLECSPVT
GEITYGLERIAMYVQGVESIYDLVWTDGPMGKLTYGDIFHQNEVEQSSYNFEHADVDALFNQFNQCEKDSQKLIEAGLAL
PAYEQVMKASHAFNLLDARHAISVTERQRYILRVRALSKAVAEAYYGKREALGFPLCKNLVK

Sequences:

>Translated_302_residues
MQKFDTKTFQGLILALQDFWARQGCAIVQPLDMEVGAGTFHPQTFLRSIGPEPMNSAYVQPCRRPTDGRYGENPNRLQQY
YQFQVVLKPSPKNIQDLYLKSLEEIGIDTSIHDIRFVEDNWESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGLECSPVT
GEITYGLERIAMYVQGVESIYDLVWTDGPMGKLTYGDIFHQNEVEQSSYNFEHADVDALFNQFNQCEKDSQKLIEAGLAL
PAYEQVMKASHAFNLLDARHAISVTERQRYILRVRALSKAVAEAYYGKREALGFPLCKNLVK
>Mature_302_residues
MQKFDTKTFQGLILALQDFWARQGCAIVQPLDMEVGAGTFHPQTFLRSIGPEPMNSAYVQPCRRPTDGRYGENPNRLQQY
YQFQVVLKPSPKNIQDLYLKSLEEIGIDTSIHDIRFVEDNWESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGLECSPVT
GEITYGLERIAMYVQGVESIYDLVWTDGPMGKLTYGDIFHQNEVEQSSYNFEHADVDALFNQFNQCEKDSQKLIEAGLAL
PAYEQVMKASHAFNLLDARHAISVTERQRYILRVRALSKAVAEAYYGKREALGFPLCKNLVK

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family

Homologues:

Organism=Escherichia coli, GI1789983, Length=301, Percent_Identity=79.0697674418605, Blast_Score=518, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SYGA_PSYIN (A1T0Y6)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_945000.1
- ProteinModelPortal:   A1T0Y6
- SMR:   A1T0Y6
- STRING:   A1T0Y6
- GeneID:   4624876
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_3727
- eggNOG:   COG0752
- HOGENOM:   HBG285316
- OMA:   CRRPTDG
- PhylomeDB:   A1T0Y6
- ProtClustDB:   PRK09348
- BioCyc:   PING357804:PING_3727-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00254
- InterPro:   IPR006194
- InterPro:   IPR002310
- PRINTS:   PR01044
- TIGRFAMs:   TIGR00388

Pfam domain/function: PF02091 tRNA-synt_2e

EC number: =6.1.1.14

Molecular weight: Translated: 34445; Mature: 34445

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKFDTKTFQGLILALQDFWARQGCAIVQPLDMEVGAGTFHPQTFLRSIGPEPMNSAYVQ
CCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHH
PCRRPTDGRYGENPNRLQQYYQFQVVLKPSPKNIQDLYLKSLEEIGIDTSIHDIRFVEDN
CCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHEEEECCC
WESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGLECSPVTGEITYGLERIAMYVQGVESI
CCCCCCCCCCCCHHHEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
YDLVWTDGPMGKLTYGDIFHQNEVEQSSYNFEHADVDALFNQFNQCEKDSQKLIEAGLAL
HHHHHCCCCCCCCCHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PAYEQVMKASHAFNLLDARHAISVTERQRYILRVRALSKAVAEAYYGKREALGFPLCKNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHH
VK
CC
>Mature Secondary Structure
MQKFDTKTFQGLILALQDFWARQGCAIVQPLDMEVGAGTFHPQTFLRSIGPEPMNSAYVQ
CCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHH
PCRRPTDGRYGENPNRLQQYYQFQVVLKPSPKNIQDLYLKSLEEIGIDTSIHDIRFVEDN
CCCCCCCCCCCCCHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHEEEECCC
WESPTLGAWGLGWEIWLNGMEVTQFTYFQQVGGLECSPVTGEITYGLERIAMYVQGVESI
CCCCCCCCCCCCHHHEECCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
YDLVWTDGPMGKLTYGDIFHQNEVEQSSYNFEHADVDALFNQFNQCEKDSQKLIEAGLAL
HHHHHCCCCCCCCCHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PAYEQVMKASHAFNLLDARHAISVTERQRYILRVRALSKAVAEAYYGKREALGFPLCKNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHH
VK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA