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The map label for this gene is yeeZ [H]

Identifier: 119947228

GI number: 119947228

Start: 4442135

End: 4442938

Strand: Reverse

Name: yeeZ [H]

Synonym: Ping_3626

Alternate gene names: 119947228

Gene position: 4442938-4442135 (Counterclockwise)

Preceding gene: 119947229

Following gene: 119947216

Centisome position: 97.44

GC content: 37.06

Gene sequence:

>804_bases
ATGCAGAAGAGTATCAGTATTTTGGGTAGCGGCTGGTTAGGTTTACCTTTGGCCGAACAGTTACGGCCAGACTTTGACTC
GGTTAATATTTCAACACGTAGGAATGACAAAGTGGCACTTTTATTATCTGCCAGATTACAGCCTTTTATTATTGATATTG
ACAATATCACGGATAATATTCAGCCATTTTTACAGTCGAATACTCTCATTATTAATATCACCAGTAAAAATGTCGAGGGG
TTTAAAAACCTGATTAAAGAAATTGAAATGTCACCTGTTAAAGAAATTTTATTGGTCAGTTCAACATCAGTTTACCCGTC
AGAAAATCGGCTGTGTCAGGAATCCGAGCCACTCGATATGAGCTCACATCCTTTATTAATTATCGAGGAGCTGTTTAATC
AGAATAAACATTTTAAAACCACTATTGTACGCTTTTCAGGTTTAATTGGCGGTAAGCGTCATCCTGGGCGATTTTTTGCT
TCGGGAAAAGCGATTCAGTTCGCCGATGCGGGGGTTAATATGATCCATATAACTGATTGTCTGGCCATTATAGGCATTAT
TATCAAGCGTCATATTTTTCCGGAACTGCTCAATGCCTGTGCGGATACTCATCCGAGTAAAGCACAATTTTATACCCTTA
ACGCCTTGGCCTTAGGTTTTAATAAACCAAATCTGAGTGATAAAAATACACCATCTAATAAAATAGTAAGTAATGAAAAG
CTTAAAAAATGCTTAAATTATCAATTTATTTATGGCGATCTGATGCAGCTGGATCCGATCAGAGATTATGATTTAACGGT
TTAG

Upstream 100 bases:

>100_bases
TATAGTTTATTTGTAAGTGCTTACTCACTCTTTAATCTTTGTGAATTAGTTATTTATTCCGTTTTATAGATTTTAGCGCA
CAAAATTCAGGAGAATAGAC

Downstream 100 bases:

>100_bases
GTGCTGCATCGCTAACGATAGGACGCCTTTTTTATATTATTAAGCGCTCATATCAATAAATAACCAGACCATGTAAGCAA
TATAAGCGGTTAATAATATG

Product: dTDP-glucose 4,6-dehydratase

Products: dTDP-4-dehydro-6-deoxy-D-glucose; H2O

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MQKSISILGSGWLGLPLAEQLRPDFDSVNISTRRNDKVALLLSARLQPFIIDIDNITDNIQPFLQSNTLIINITSKNVEG
FKNLIKEIEMSPVKEILLVSSTSVYPSENRLCQESEPLDMSSHPLLIIEELFNQNKHFKTTIVRFSGLIGGKRHPGRFFA
SGKAIQFADAGVNMIHITDCLAIIGIIIKRHIFPELLNACADTHPSKAQFYTLNALALGFNKPNLSDKNTPSNKIVSNEK
LKKCLNYQFIYGDLMQLDPIRDYDLTV

Sequences:

>Translated_267_residues
MQKSISILGSGWLGLPLAEQLRPDFDSVNISTRRNDKVALLLSARLQPFIIDIDNITDNIQPFLQSNTLIINITSKNVEG
FKNLIKEIEMSPVKEILLVSSTSVYPSENRLCQESEPLDMSSHPLLIIEELFNQNKHFKTTIVRFSGLIGGKRHPGRFFA
SGKAIQFADAGVNMIHITDCLAIIGIIIKRHIFPELLNACADTHPSKAQFYTLNALALGFNKPNLSDKNTPSNKIVSNEK
LKKCLNYQFIYGDLMQLDPIRDYDLTV
>Mature_267_residues
MQKSISILGSGWLGLPLAEQLRPDFDSVNISTRRNDKVALLLSARLQPFIIDIDNITDNIQPFLQSNTLIINITSKNVEG
FKNLIKEIEMSPVKEILLVSSTSVYPSENRLCQESEPLDMSSHPLLIIEELFNQNKHFKTTIVRFSGLIGGKRHPGRFFA
SGKAIQFADAGVNMIHITDCLAIIGIIIKRHIFPELLNACADTHPSKAQFYTLNALALGFNKPNLSDKNTPSNKIVSNEK
LKKCLNYQFIYGDLMQLDPIRDYDLTV

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788327, Length=274, Percent_Identity=26.6423357664234, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: 4.2.1.46

Molecular weight: Translated: 29970; Mature: 29970

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKSISILGSGWLGLPLAEQLRPDFDSVNISTRRNDKVALLLSARLQPFIIDIDNITDNI
CCCCEEEEECCCCCCCCHHHHCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCHH
QPFLQSNTLIINITSKNVEGFKNLIKEIEMSPVKEILLVSSTSVYPSENRLCQESEPLDM
HHHHCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCCCCCCCCCCCC
SSHPLLIIEELFNQNKHFKTTIVRFSGLIGGKRHPGRFFASGKAIQFADAGVNMIHITDC
CCCCEEEEHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCEEEHHHH
LAIIGIIIKRHIFPELLNACADTHPSKAQFYTLNALALGFNKPNLSDKNTPSNKIVSNEK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHH
LKKCLNYQFIYGDLMQLDPIRDYDLTV
HHHHHCEEEEECCHHHCCCCCCCCCCC
>Mature Secondary Structure
MQKSISILGSGWLGLPLAEQLRPDFDSVNISTRRNDKVALLLSARLQPFIIDIDNITDNI
CCCCEEEEECCCCCCCCHHHHCCCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCHH
QPFLQSNTLIINITSKNVEGFKNLIKEIEMSPVKEILLVSSTSVYPSENRLCQESEPLDM
HHHHCCCEEEEEEECCCHHHHHHHHHHHCCCHHHHHHEEECCCCCCCCCCCCCCCCCCCC
SSHPLLIIEELFNQNKHFKTTIVRFSGLIGGKRHPGRFFASGKAIQFADAGVNMIHITDC
CCCCEEEEHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCEEEHHHH
LAIIGIIIKRHIFPELLNACADTHPSKAQFYTLNALALGFNKPNLSDKNTPSNKIVSNEK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCHHH
LKKCLNYQFIYGDLMQLDPIRDYDLTV
HHHHHCEEEEECCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: dTDPglucose

Specific reaction: dTDP-glucose = dTDP-4-dehydro-6-deoxy-D-glucose + H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]