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The map label for this gene is rdoA [H]

Identifier: 119947221

GI number: 119947221

Start: 4436211

End: 4437206

Strand: Direct

Name: rdoA [H]

Synonym: Ping_3619

Alternate gene names: 119947221

Gene position: 4436211-4437206 (Clockwise)

Preceding gene: 119947220

Following gene: 119947222

Centisome position: 97.29

GC content: 38.15

Gene sequence:

>996_bases
ATGCACATGCAAGCAAATTTCAGTTACCAATCTCTTACACCTGAACTGCAACTTGATGCTCTGGCATCCATTGCCGTCTA
TCCGGAATCAGGGTTAATCTCACTTAATTCCTATGAAAATCGGGTGTCTTTATTTACCGATGAAAATAAAATTCGTTACG
TGGTGAAGTTTTACAGGCCCCAACACTGGAGTGAAGCGCAATTAAAAGAAGAACACCGATTTTGCCAAGTCTTAGAGAAA
AACGGCTGTCAAATTGCCTCACCCATAGAAATTAACCAACAAACCTTATTTTACTTCCAAGGTTACTATTTTGCACTGTT
CAATAGTTTATCTGCACGCTCCATGGAGCTTGATAATATCGATATACTCTATGATGTGGGTTGTGCTTTAGGAAAAATAC
ACCGCATCGGGGCTCAGGATAGCTTTAAACATAGAGAGCCTCTTAATGTCCAAACTATGTTGTCAAACCCAATTAAAGCA
CTGCGGACAAGTACTTATATTCCAAAATCTCTCCGCAATCCATTATTTTCCATACTCGATGCGCTTGAACTTGAAATAAC
AAAGCAATTTGATAATCACAAACATACAACAATTCGCTTACATGGCGATTGTCATGCGAGTAATATTTTACTCAAAAATA
ACTCACCCTATTTTGTAGATTTTGATGATTGTAAAATGGGCCCTGCCATCCAAGATCTGTGGATTTTACTGAGCGGCACA
AAACCAGAGAAGCAGCTTCAATTGTCAATGTTATTAGAAGGTTACGAAGAAGAGTTTGATTTTGACCGGAATCAGTTATG
CTTAATTGAGCCACTACGCACAATGCGAATCATTAGTCATGTTAACTGGATTAATAAACGTTGGTCAGATCCCGCTTTTC
CGCTTAGCTTTCCGTGGTTTATAACGGATCAATATTGGAAAGAGCTGTTACAATCACTTAAAGATCAATTAATCGCCTTA
AAGGAAGCGCCTATTTCTTTACAACCAAATTATTAA

Upstream 100 bases:

>100_bases
GTGCCTCCGGTGAAGTTGAAACAATAGAACAACAAACAACCTTCTTTCTTGGTTTATAAAAAAATATCAAGGGCCTGATC
AGGCCCTTTTTTATCGAGTA

Downstream 100 bases:

>100_bases
AGATAAGATAACCGCGTTACCCATTTTACCTAAGGAACAACAATGAAAAAGATTTTTGCACTACTAACGGCCTTGATTAT
ATTTCCATTTTCAGCACAAG

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MHMQANFSYQSLTPELQLDALASIAVYPESGLISLNSYENRVSLFTDENKIRYVVKFYRPQHWSEAQLKEEHRFCQVLEK
NGCQIASPIEINQQTLFYFQGYYFALFNSLSARSMELDNIDILYDVGCALGKIHRIGAQDSFKHREPLNVQTMLSNPIKA
LRTSTYIPKSLRNPLFSILDALELEITKQFDNHKHTTIRLHGDCHASNILLKNNSPYFVDFDDCKMGPAIQDLWILLSGT
KPEKQLQLSMLLEGYEEEFDFDRNQLCLIEPLRTMRIISHVNWINKRWSDPAFPLSFPWFITDQYWKELLQSLKDQLIAL
KEAPISLQPNY

Sequences:

>Translated_331_residues
MHMQANFSYQSLTPELQLDALASIAVYPESGLISLNSYENRVSLFTDENKIRYVVKFYRPQHWSEAQLKEEHRFCQVLEK
NGCQIASPIEINQQTLFYFQGYYFALFNSLSARSMELDNIDILYDVGCALGKIHRIGAQDSFKHREPLNVQTMLSNPIKA
LRTSTYIPKSLRNPLFSILDALELEITKQFDNHKHTTIRLHGDCHASNILLKNNSPYFVDFDDCKMGPAIQDLWILLSGT
KPEKQLQLSMLLEGYEEEFDFDRNQLCLIEPLRTMRIISHVNWINKRWSDPAFPLSFPWFITDQYWKELLQSLKDQLIAL
KEAPISLQPNY
>Mature_331_residues
MHMQANFSYQSLTPELQLDALASIAVYPESGLISLNSYENRVSLFTDENKIRYVVKFYRPQHWSEAQLKEEHRFCQVLEK
NGCQIASPIEINQQTLFYFQGYYFALFNSLSARSMELDNIDILYDVGCALGKIHRIGAQDSFKHREPLNVQTMLSNPIKA
LRTSTYIPKSLRNPLFSILDALELEITKQFDNHKHTTIRLHGDCHASNILLKNNSPYFVDFDDCKMGPAIQDLWILLSGT
KPEKQLQLSMLLEGYEEEFDFDRNQLCLIEPLRTMRIISHVNWINKRWSDPAFPLSFPWFITDQYWKELLQSLKDQLIAL
KEAPISLQPNY

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=325, Percent_Identity=43.0769230769231, Blast_Score=294, Evalue=5e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 38608; Mature: 38608

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMQANFSYQSLTPELQLDALASIAVYPESGLISLNSYENRVSLFTDENKIRYVVKFYRP
CCCCCCCCHHHCCCCHHHHHHEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEEEECC
QHWSEAQLKEEHRFCQVLEKNGCQIASPIEINQQTLFYFQGYYFALFNSLSARSMELDNI
CCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECHHHHHHHHHCCCCEEECCCE
DILYDVGCALGKIHRIGAQDSFKHREPLNVQTMLSNPIKALRTSTYIPKSLRNPLFSILD
EEEEHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ALELEITKQFDNHKHTTIRLHGDCHASNILLKNNSPYFVDFDDCKMGPAIQDLWILLSGT
HHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCCEEEEECCCCCCCCHHEEEEEEECC
KPEKQLQLSMLLEGYEEEFDFDRNQLCLIEPLRTMRIISHVNWINKRWSDPAFPLSFPWF
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
ITDQYWKELLQSLKDQLIALKEAPISLQPNY
ECHHHHHHHHHHHHHHHHHHHCCCEECCCCC
>Mature Secondary Structure
MHMQANFSYQSLTPELQLDALASIAVYPESGLISLNSYENRVSLFTDENKIRYVVKFYRP
CCCCCCCCHHHCCCCHHHHHHEEEEEECCCCEEEECCCCCEEEEEECCCCEEEEEEEECC
QHWSEAQLKEEHRFCQVLEKNGCQIASPIEINQQTLFYFQGYYFALFNSLSARSMELDNI
CCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEECHHHHHHHHHCCCCEEECCCE
DILYDVGCALGKIHRIGAQDSFKHREPLNVQTMLSNPIKALRTSTYIPKSLRNPLFSILD
EEEEHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ALELEITKQFDNHKHTTIRLHGDCHASNILLKNNSPYFVDFDDCKMGPAIQDLWILLSGT
HHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCCEEEEECCCCCCCCHHEEEEEEECC
KPEKQLQLSMLLEGYEEEFDFDRNQLCLIEPLRTMRIISHVNWINKRWSDPAFPLSFPWF
CCHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
ITDQYWKELLQSLKDQLIALKEAPISLQPNY
ECHHHHHHHHHHHHHHHHHHHCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]