| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is fixG [H]
Identifier: 119947220
GI number: 119947220
Start: 4434763
End: 4436169
Strand: Direct
Name: fixG [H]
Synonym: Ping_3618
Alternate gene names: 119947220
Gene position: 4434763-4436169 (Clockwise)
Preceding gene: 119947219
Following gene: 119947221
Centisome position: 97.26
GC content: 39.37
Gene sequence:
>1407_bases ATGATGACTGACCGTATTAAAATAAAAGAGATAGACAGCAGCAATACAAGCGACGTTAAACAATATAATCCGAGCAACCG AATTTATGTGCGCGCCATGTATGGATTTTATCAAAAACTACGTCGTTATACGGGCTGGGGATTAATTGTTGCATTTGTGG CCTTACCCCTAATGCAGTGGAATGGACAGCAGGCAATTTTATTTGATATCGCCGATCAACAGTATCATATTTTTAATATG ACCCTCTTTCCACAAGATCTTACCCTACTCGCCTGGGTATTTATTATTGCAGCATTTGCTTTATTCTTTATAACGACTTA TTTGGGACGAGTTTGGTGTGGTTATACTTGTCCGCAAACCGTTTGGACATTTATCTTTATTTGGTTTGAAGAGCGTTGTG AAGGCAGCGCAAATAAACGCAAAAGATTGGATCAGATGTCCTGGAGCTTTAATAAGATTTGGCGAAAAACGGCAAAACAT ATAGGTTGGATCACTTTTTCTTTACTCACGGGCTTGGCTTTTTCATCTTATTTTGTGCCTGTTAGGGAACTTTATCTCGA TTTTTTCACTTTTAATACTGGTTTTGCAACCACCACCAGTGTGCTCTTTTTTACCGTAATCACCTACATAAATGCCGGTT GGATGAGATCCATTGTCTGCCTGCATATGTGCCCCTACGCCCGCTTCCAGTCAGCCATGTTTGATAAAAACACTTATATT GTCGGTTATGATGCGAAGCGCGGTGAAACTCGAGGCCCAAGAAGTCGCAAGGATTCCCCTGAAGAGTTAGGATTAGGGGA TTGTGTCGATTGTGACCTTTGTGTGCAAGTGTGTCCAACGGGCATTGATATTCGCAATGGCTTACAATATGAATGTATTA ACTGCGGGGCTTGTGTGGATGCTTGTGATTATACTATGGATAAAATGGGTTATCCGCGCGGATTAATATCCTATACCACG GAAGAAAAATTAGCGGGTAAAAAAACCAAGGTATTACGTCCTAAAATTATCGGCTATGGTGCTTTGTTATTAATAATGAT CGCCGTATTTTTTATTAACATTGCCAATTTAAGCAGTGCCGAAATGGAGATTCTCCGCGACCGTAACGTGTTATACCGAG AAAATAGTCAAGGGTTAACTGAAAATACATACACTTTAAAAATATTAAATAAAACCATAAAAACCCAAACCTACGATTTA TCTTTTTCCGGTCTGAAAGATGCTCAGCTGCTTGGTCCTAACCAAATTATTATAAAACCGGGCGAAGTATTAACCCAACC TATTTCAATTGCTGTCGATCCCTATGGCATTAAGGAAAACAAGATTTACATTACTATTACACTGACTGGTGCCTCCGGTG AAGTTGAAACAATAGAACAACAAACAACCTTCTTTCTTGGTTTATAA
Upstream 100 bases:
>100_bases TAGTTAGGATCAATTAATAAGTCAAATTAGTAAATGCATTATTTTTATTTAGCCAACTTCCTTTATAATACGCTTTCAAA AACCCCCACCTCAGGATCGA
Downstream 100 bases:
>100_bases AAAAATATCAAGGGCCTGATCAGGCCCTTTTTTATCGAGTAATGCACATGCAAGCAAATTTCAGTTACCAATCTCTTACA CCTGAACTGCAACTTGATGC
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MMTDRIKIKEIDSSNTSDVKQYNPSNRIYVRAMYGFYQKLRRYTGWGLIVAFVALPLMQWNGQQAILFDIADQQYHIFNM TLFPQDLTLLAWVFIIAAFALFFITTYLGRVWCGYTCPQTVWTFIFIWFEERCEGSANKRKRLDQMSWSFNKIWRKTAKH IGWITFSLLTGLAFSSYFVPVRELYLDFFTFNTGFATTTSVLFFTVITYINAGWMRSIVCLHMCPYARFQSAMFDKNTYI VGYDAKRGETRGPRSRKDSPEELGLGDCVDCDLCVQVCPTGIDIRNGLQYECINCGACVDACDYTMDKMGYPRGLISYTT EEKLAGKKTKVLRPKIIGYGALLLIMIAVFFINIANLSSAEMEILRDRNVLYRENSQGLTENTYTLKILNKTIKTQTYDL SFSGLKDAQLLGPNQIIIKPGEVLTQPISIAVDPYGIKENKIYITITLTGASGEVETIEQQTTFFLGL
Sequences:
>Translated_468_residues MMTDRIKIKEIDSSNTSDVKQYNPSNRIYVRAMYGFYQKLRRYTGWGLIVAFVALPLMQWNGQQAILFDIADQQYHIFNM TLFPQDLTLLAWVFIIAAFALFFITTYLGRVWCGYTCPQTVWTFIFIWFEERCEGSANKRKRLDQMSWSFNKIWRKTAKH IGWITFSLLTGLAFSSYFVPVRELYLDFFTFNTGFATTTSVLFFTVITYINAGWMRSIVCLHMCPYARFQSAMFDKNTYI VGYDAKRGETRGPRSRKDSPEELGLGDCVDCDLCVQVCPTGIDIRNGLQYECINCGACVDACDYTMDKMGYPRGLISYTT EEKLAGKKTKVLRPKIIGYGALLLIMIAVFFINIANLSSAEMEILRDRNVLYRENSQGLTENTYTLKILNKTIKTQTYDL SFSGLKDAQLLGPNQIIIKPGEVLTQPISIAVDPYGIKENKIYITITLTGASGEVETIEQQTTFFLGL >Mature_468_residues MMTDRIKIKEIDSSNTSDVKQYNPSNRIYVRAMYGFYQKLRRYTGWGLIVAFVALPLMQWNGQQAILFDIADQQYHIFNM TLFPQDLTLLAWVFIIAAFALFFITTYLGRVWCGYTCPQTVWTFIFIWFEERCEGSANKRKRLDQMSWSFNKIWRKTAKH IGWITFSLLTGLAFSSYFVPVRELYLDFFTFNTGFATTTSVLFFTVITYINAGWMRSIVCLHMCPYARFQSAMFDKNTYI VGYDAKRGETRGPRSRKDSPEELGLGDCVDCDLCVQVCPTGIDIRNGLQYECINCGACVDACDYTMDKMGYPRGLISYTT EEKLAGKKTKVLRPKIIGYGALLLIMIAVFFINIANLSSAEMEILRDRNVLYRENSQGLTENTYTLKILNKTIKTQTYDL SFSGLKDAQLLGPNQIIIKPGEVLTQPISIAVDPYGIKENKIYITITLTGASGEVETIEQQTTFFLGL
Specific function: FixG is predicted to be involved in a redox process. The four proteins fixG, fixH, fixI, and fixS may participate in a membrane-bound complex coupling the fixI cation pump with a redox process catalyzed by fixG [H]
COG id: COG0348
COG function: function code C; Polyferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR014116 - InterPro: IPR012285 - InterPro: IPR013783 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53539; Mature: 53539
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTDRIKIKEIDSSNTSDVKQYNPSNRIYVRAMYGFYQKLRRYTGWGLIVAFVALPLMQW CCCCCEEEEECCCCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHC NGQQAILFDIADQQYHIFNMTLFPQDLTLLAWVFIIAAFALFFITTYLGRVWCGYTCPQT CCCEEEEEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VWTFIFIWFEERCEGSANKRKRLDQMSWSFNKIWRKTAKHIGWITFSLLTGLAFSSYFVP HHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRELYLDFFTFNTGFATTTSVLFFTVITYINAGWMRSIVCLHMCPYARFQSAMFDKNTYI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHCCCCCEE VGYDAKRGETRGPRSRKDSPEELGLGDCVDCDLCVQVCPTGIDIRNGLQYECINCGACVD EEECCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEECCCCHHH ACDYTMDKMGYPRGLISYTTEEKLAGKKTKVLRPKIIGYGALLLIMIAVFFINIANLSSA HHHHHHHHCCCCCCHHEECCHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH EMEILRDRNVLYRENSQGLTENTYTLKILNKTIKTQTYDLSFSGLKDAQLLGPNQIIIKP HHHHHHCCCCEEEECCCCCCCCEEEEEEEHHHHCCEEEEEECCCCCCCEEECCCEEEECC GEVLTQPISIAVDPYGIKENKIYITITLTGASGEVETIEQQTTFFLGL HHHHCCCEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHEEEECC >Mature Secondary Structure MMTDRIKIKEIDSSNTSDVKQYNPSNRIYVRAMYGFYQKLRRYTGWGLIVAFVALPLMQW CCCCCEEEEECCCCCCCHHHHCCCCCCEEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHC NGQQAILFDIADQQYHIFNMTLFPQDLTLLAWVFIIAAFALFFITTYLGRVWCGYTCPQT CCCEEEEEEECCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VWTFIFIWFEERCEGSANKRKRLDQMSWSFNKIWRKTAKHIGWITFSLLTGLAFSSYFVP HHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRELYLDFFTFNTGFATTTSVLFFTVITYINAGWMRSIVCLHMCPYARFQSAMFDKNTYI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHCCCCCEE VGYDAKRGETRGPRSRKDSPEELGLGDCVDCDLCVQVCPTGIDIRNGLQYECINCGACVD EEECCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEECCCCHHH ACDYTMDKMGYPRGLISYTTEEKLAGKKTKVLRPKIIGYGALLLIMIAVFFINIANLSSA HHHHHHHHCCCCCCHHEECCHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH EMEILRDRNVLYRENSQGLTENTYTLKILNKTIKTQTYDLSFSGLKDAQLLGPNQIIIKP HHHHHHCCCCEEEECCCCCCCCEEEEEEEHHHHCCEEEEEECCCCCCCEEECCCEEEECC GEVLTQPISIAVDPYGIKENKIYITITLTGASGEVETIEQQTTFFLGL HHHHCCCEEEEECCCCCCCCEEEEEEEEECCCCCHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2536685; 11481432 [H]