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The map label for this gene is ybgL [C]

Identifier: 119947149

GI number: 119947149

Start: 4364801

End: 4365532

Strand: Direct

Name: ybgL [C]

Synonym: Ping_3547

Alternate gene names: 119947149

Gene position: 4364801-4365532 (Clockwise)

Preceding gene: 119947144

Following gene: 119947150

Centisome position: 95.73

GC content: 49.32

Gene sequence:

>732_bases
ATGAAACTTAATTGCGATATGGGAGAAAGTTTTGGTATCTGGGAAATGGGCTTAGATGAAGCGGTGATACCTTGGATTGA
TATGGCTAATATCGCCTGCGGATTCCATGCATCGGATCCGGATGTGATGGCCAAAACCGTTCAGTCAGCCGTTAAAAAAA
ACGTCCAGATTGGTGCCCACCCCGGGTATAACGATAAAATAGGTTTTGGACGACGCAGTATTCCCCATACCCAAAAGCAG
ATATCCCACTTGATCGCCTACCAGACCGGTGCCCTGCAAGCAATCTGCCAGCTCTATGGCGGTAATGTTGAATATGTCAA
ACCCCATGGTGCGCTGTATAACGATATGATGGTCGATCAAGATATTTTTCGCGCCGTTATTGACGGTCTGACCAAGCTGT
CTCCCCGGCCGGCGCTGATGATCCTCGCCCAAACGGATAATAGCCTTTACAAGGGTATTGCTGATCAGGCGGGCGTGCGC
TTAATTTTAGAAGCCTTTGCCGACAGGGCCTACACACCTGAAGGCCGACTTGCTCCGCGCTCACAAGCAGGTGCGGTATA
TCATTGCCCAGAGCAAATTATCAAACAGGTTATGCAATTAGCCAAAAATGGTTGTGTTACCACAATCGAGGGCGGCCAAC
TGCAGCTTAACGCTGATAGTGTCTGTGTTCATGGTGACAATCCGGAGTCGGTAGCAACAGTCGAGCAACTATTCAGGGCA
CTGAACCCATGA

Upstream 100 bases:

>100_bases
GAATCACACTTTTGGAGTCATGATAAGATTCATTTCTCGGATCTGATAGGATCGTATCGCTCTCAAATAATTACCCTAAC
GTCAAAATAGGAAGGTAGAA

Downstream 100 bases:

>100_bases
AATCACCTATCATCAAGCGGGTATCAGAAACCCATGCCATGATTTATATCGGGGACACTATTGCCCCGGAACGGGCATCT
CTAATTGGCTCTCTGTGCGA

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKLNCDMGESFGIWEMGLDEAVIPWIDMANIACGFHASDPDVMAKTVQSAVKKNVQIGAHPGYNDKIGFGRRSIPHTQKQ
ISHLIAYQTGALQAICQLYGGNVEYVKPHGALYNDMMVDQDIFRAVIDGLTKLSPRPALMILAQTDNSLYKGIADQAGVR
LILEAFADRAYTPEGRLAPRSQAGAVYHCPEQIIKQVMQLAKNGCVTTIEGGQLQLNADSVCVHGDNPESVATVEQLFRA
LNP

Sequences:

>Translated_243_residues
MKLNCDMGESFGIWEMGLDEAVIPWIDMANIACGFHASDPDVMAKTVQSAVKKNVQIGAHPGYNDKIGFGRRSIPHTQKQ
ISHLIAYQTGALQAICQLYGGNVEYVKPHGALYNDMMVDQDIFRAVIDGLTKLSPRPALMILAQTDNSLYKGIADQAGVR
LILEAFADRAYTPEGRLAPRSQAGAVYHCPEQIIKQVMQLAKNGCVTTIEGGQLQLNADSVCVHGDNPESVATVEQLFRA
LNP
>Mature_243_residues
MKLNCDMGESFGIWEMGLDEAVIPWIDMANIACGFHASDPDVMAKTVQSAVKKNVQIGAHPGYNDKIGFGRRSIPHTQKQ
ISHLIAYQTGALQAICQLYGGNVEYVKPHGALYNDMMVDQDIFRAVIDGLTKLSPRPALMILAQTDNSLYKGIADQAGVR
LILEAFADRAYTPEGRLAPRSQAGAVYHCPEQIIKQVMQLAKNGCVTTIEGGQLQLNADSVCVHGDNPESVATVEQLFRA
LNP

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=241, Percent_Identity=34.4398340248963, Blast_Score=146, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 26470; Mature: 26470

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNCDMGESFGIWEMGLDEAVIPWIDMANIACGFHASDPDVMAKTVQSAVKKNVQIGAH
CCCCCCCCCCCCCHHCCCCCHHHCHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCEECCC
PGYNDKIGFGRRSIPHTQKQISHLIAYQTGALQAICQLYGGNVEYVKPHGALYNDMMVDQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHH
DIFRAVIDGLTKLSPRPALMILAQTDNSLYKGIADQAGVRLILEAFADRAYTPEGRLAPR
HHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SQAGAVYHCPEQIIKQVMQLAKNGCVTTIEGGQLQLNADSVCVHGDNPESVATVEQLFRA
CCCCCEEECHHHHHHHHHHHHHCCCEEEEECCEEEECCCEEEEECCCCHHHHHHHHHHHH
LNP
HCC
>Mature Secondary Structure
MKLNCDMGESFGIWEMGLDEAVIPWIDMANIACGFHASDPDVMAKTVQSAVKKNVQIGAH
CCCCCCCCCCCCCHHCCCCCHHHCHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCEECCC
PGYNDKIGFGRRSIPHTQKQISHLIAYQTGALQAICQLYGGNVEYVKPHGALYNDMMVDQ
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHH
DIFRAVIDGLTKLSPRPALMILAQTDNSLYKGIADQAGVRLILEAFADRAYTPEGRLAPR
HHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
SQAGAVYHCPEQIIKQVMQLAKNGCVTTIEGGQLQLNADSVCVHGDNPESVATVEQLFRA
CCCCCEEECHHHHHHHHHHHHHCCCEEEEECCEEEECCCEEEEECCCCHHHHHHHHHHHH
LNP
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA