| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119947035
Identifier: 119947035
GI number: 119947035
Start: 4243581
End: 4244018
Strand: Direct
Name: 119947035
Synonym: Ping_3432
Alternate gene names: NA
Gene position: 4243581-4244018 (Clockwise)
Preceding gene: 119947034
Following gene: 119947036
Centisome position: 93.07
GC content: 37.9
Gene sequence:
>438_bases ATGAAAACCTTCATTTCACTATTCGCCGCCGGACTATTACTGATAAGCTCACAACTGTTTGCCGCCACATTAACCGTTGG AGATCTTTATATTCGAGCGACACCGCCTAACAGCAAAAACAGCGCGGCCTTTATGGTCATAAAAAATACAGATAAAAAAG ACATTAAACTGATTGCAGCCGGCAGTGATATCGCAGATCGTGTCGAGTTACATGAGCATGTGATGGATAACGGTTTAATG AAAATGCGTCAGGTTAAAGAGATTATTATCAAAACTAAAAGCTCGGTTAAATTGCAACCAGGCGGTTATCATGTAATGTT TCTTAATCTAAAACAGCCTCTTAAAGAAGGCGCATCAGTGAAACTGTCTTTATTTTTTGATAATGGCCAGCAGCTGACTT TTGAAGCACCTATTAAAAAAATTAAAATGCAAAAATAA
Upstream 100 bases:
>100_bases TTTTATTAAATACTTTATCATTGATCTTTAAATTTGGTCTGTGGATAATATTCGCTGTCGCTATCTATTATCTTTTTTTC GCCAAAAATAAGGACTCTTA
Downstream 100 bases:
>100_bases TACACCTAAAACCAATAACAACAATAAGGGAATATAATGAAAAAACAGATCGCTACCGCTATTATCGCCAGTCTTATGTG CATGCCGAGCATCGCCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MKTFISLFAAGLLLISSQLFAATLTVGDLYIRATPPNSKNSAAFMVIKNTDKKDIKLIAAGSDIADRVELHEHVMDNGLM KMRQVKEIIIKTKSSVKLQPGGYHVMFLNLKQPLKEGASVKLSLFFDNGQQLTFEAPIKKIKMQK
Sequences:
>Translated_145_residues MKTFISLFAAGLLLISSQLFAATLTVGDLYIRATPPNSKNSAAFMVIKNTDKKDIKLIAAGSDIADRVELHEHVMDNGLM KMRQVKEIIIKTKSSVKLQPGGYHVMFLNLKQPLKEGASVKLSLFFDNGQQLTFEAPIKKIKMQK >Mature_145_residues MKTFISLFAAGLLLISSQLFAATLTVGDLYIRATPPNSKNSAAFMVIKNTDKKDIKLIAAGSDIADRVELHEHVMDNGLM KMRQVKEIIIKTKSSVKLQPGGYHVMFLNLKQPLKEGASVKLSLFFDNGQQLTFEAPIKKIKMQK
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16108; Mature: 16108
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFISLFAAGLLLISSQLFAATLTVGDLYIRATPPNSKNSAAFMVIKNTDKKDIKLIAA CHHHHHHHHHHHHHHHHHHHHEEEEECEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEE GSDIADRVELHEHVMDNGLMKMRQVKEIIIKTKSSVKLQPGGYHVMFLNLKQPLKEGASV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECCHHHCCCCEE KLSLFFDNGQQLTFEAPIKKIKMQK EEEEEEECCCEEEEECCHHHHCCCC >Mature Secondary Structure MKTFISLFAAGLLLISSQLFAATLTVGDLYIRATPPNSKNSAAFMVIKNTDKKDIKLIAA CHHHHHHHHHHHHHHHHHHHHEEEEECEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEE GSDIADRVELHEHVMDNGLMKMRQVKEIIIKTKSSVKLQPGGYHVMFLNLKQPLKEGASV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEEEEEECCHHHCCCCEE KLSLFFDNGQQLTFEAPIKKIKMQK EEEEEEECCCEEEEECCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA