| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is ilvI [H]
Identifier: 119947033
GI number: 119947033
Start: 4241074
End: 4242798
Strand: Direct
Name: ilvI [H]
Synonym: Ping_3430
Alternate gene names: 119947033
Gene position: 4241074-4242798 (Clockwise)
Preceding gene: 119947026
Following gene: 119947034
Centisome position: 93.01
GC content: 40.93
Gene sequence:
>1725_bases ATGGAGATGTTATCCGGCGCCGAAATGGTTGTCCGATCACTACAAGACGAAGGTATTGAACATATTTTCGGTTACCCTGG TGGATCAGTATTAGATATTTACGATGCGATTTTTCAATCTGATAAAATTGAACATTATTTAGTACGTCATGAGCAAGCTG CTGTACATATGGCAGATGCATACTCACGTGCAACCGGTAAAGTGGGTTGTGTACTAGTAACAGCCGGACCCGGTGCAACA AACTGTATTACAGGTCTTGTAACAGCTTACATGGACTCTATTCCATTAGTTGTGTTATCTGGTCAAGTACCAACCAATTG GATCGGCGATGATGCTTTCCAGGAAGCAGATATGATCGGCATATCGCGTCCCGTGGTAAAACACAGTTTTTCATGCCGTA CCGCTGAAGACATTCCAATTGCGATCAAAAAAGCATTTTATATCGCATCAACAGGCCGACCAGGTCCAGTGGTTATCGAT CTTCCAAAAGACGTACAAAGCCCCCTTCATAAATTTCCTTATGAATACCCTAAATCCGTTGAACTGCGTTCTTATAAACC AACGCTAAGCGGTCATAAAGGACAAATTAAACGCGCATTAGCGGCATTATTAGGCGCTAAAAAGCCCGTTTTTTATGTCG GTGGCGGTGCGATTATTGCCAATGCATCAAAACAAGTACTAGAGCTAGCTGAGAAATTAAATTTACCAGTAACTAATACC TTAATGGGTCTTGGTGCATTTCCTGGTGAACACAAACAATTTATCGGTATGTTAGGCATGCACGGTACTTATGAAGCTAA CTTATCAATGCATAACGCAGATCTTATCTTCTCTGCCGGTGCTCGTTTTGACGATCGAGTAACCAATAATGTTGATAAAT TCTGCCCGAATGCAAAAATTATGCAGATAGATATCGACCCAACATCAATTTCTAAAAACATTCATGCGGACCTGCCAATT GTAGGATCGATTGAAGTTGTACTTCAGCAGATGTTAGACCTACTTGAAGAAACTAAAGCAACGAATGACAGTGAAAGTAT TAATGCTTGGTGGGATCAAATTAATGAATGGCGTGCTAAAGACTGCCTTGCTTACCAAACATCTGAAACACACATCAAGC CACAACAAGTGATTCAATGTTTATATAAAGTAACCAAAGGCGATGCTATCGTTACTTCTGACGTTGGTCAGCATCAAATG GTTGCCGCACAATATTACCCATTTAAAGAACCTCGCCAATGGATTAACTCTGGTGGAGCGGGCACAATGGGCTTTGGTTT ACCAGCTGCAATGGGTTGTAAGATAGCATTCCCAGATCGCCCTGTTGTATGTGTAACGGGTGATGGCTCTATTCAAATGA ATATTCAAGAGTTATCAACCTGCATGCAATACAACATTCCTGTTGTTATCTTGCTATTAAACAACCGTTCATTAGGTATG GTAAAACAGTGGCAAAAAATGTTTTATGACGGTCGCCAATCTCACTCTTATATGGATAGCGTGCCGGATTTCGTTAAATT ATCTGAAGCATATAACCATATTGGTATCAAAGTAGATAAGATTGAAGAGCTTGAGCCAGCATTAGAACGTGCATTTGAAT TAAAAGATCGCGTGGTATTTATTGATGTAGCTATAGACCCTGAAGAACATGTTTACCCGATGCAAGTTAAGTTCGGCAGT ATGCAAGACATGTACCTGAGTCAAACGGAGAGAACCGATGCGTAG
Upstream 100 bases:
>100_bases AATGCAGGTCATGAATCATGGTCACATGTAATCAAGGTTCACCCTCACCCAATACAGGTGGGAAGTGACGCAATTTACCA ATTGTATAAAGGAGAAAGTT
Downstream 100 bases:
>100_bases TATTATTTCAGTATTATTAGAAAATGAACCAGGTTCGCTTGCTCGTGTTGTTGGCTTATTTGCACAACGCGCATATAACA TCGAGTCATTAACCGTTTCA
Product: acetolactate synthase, large subunit, biosynthetic type
Products: NA
Alternate protein names: AHAS-III; ALS-III; Acetohydroxy-acid synthase III large subunit [H]
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MEMLSGAEMVVRSLQDEGIEHIFGYPGGSVLDIYDAIFQSDKIEHYLVRHEQAAVHMADAYSRATGKVGCVLVTAGPGAT NCITGLVTAYMDSIPLVVLSGQVPTNWIGDDAFQEADMIGISRPVVKHSFSCRTAEDIPIAIKKAFYIASTGRPGPVVID LPKDVQSPLHKFPYEYPKSVELRSYKPTLSGHKGQIKRALAALLGAKKPVFYVGGGAIIANASKQVLELAEKLNLPVTNT LMGLGAFPGEHKQFIGMLGMHGTYEANLSMHNADLIFSAGARFDDRVTNNVDKFCPNAKIMQIDIDPTSISKNIHADLPI VGSIEVVLQQMLDLLEETKATNDSESINAWWDQINEWRAKDCLAYQTSETHIKPQQVIQCLYKVTKGDAIVTSDVGQHQM VAAQYYPFKEPRQWINSGGAGTMGFGLPAAMGCKIAFPDRPVVCVTGDGSIQMNIQELSTCMQYNIPVVILLLNNRSLGM VKQWQKMFYDGRQSHSYMDSVPDFVKLSEAYNHIGIKVDKIEELEPALERAFELKDRVVFIDVAIDPEEHVYPMQVKFGS MQDMYLSQTERTDA
Sequences:
>Translated_574_residues MEMLSGAEMVVRSLQDEGIEHIFGYPGGSVLDIYDAIFQSDKIEHYLVRHEQAAVHMADAYSRATGKVGCVLVTAGPGAT NCITGLVTAYMDSIPLVVLSGQVPTNWIGDDAFQEADMIGISRPVVKHSFSCRTAEDIPIAIKKAFYIASTGRPGPVVID LPKDVQSPLHKFPYEYPKSVELRSYKPTLSGHKGQIKRALAALLGAKKPVFYVGGGAIIANASKQVLELAEKLNLPVTNT LMGLGAFPGEHKQFIGMLGMHGTYEANLSMHNADLIFSAGARFDDRVTNNVDKFCPNAKIMQIDIDPTSISKNIHADLPI VGSIEVVLQQMLDLLEETKATNDSESINAWWDQINEWRAKDCLAYQTSETHIKPQQVIQCLYKVTKGDAIVTSDVGQHQM VAAQYYPFKEPRQWINSGGAGTMGFGLPAAMGCKIAFPDRPVVCVTGDGSIQMNIQELSTCMQYNIPVVILLLNNRSLGM VKQWQKMFYDGRQSHSYMDSVPDFVKLSEAYNHIGIKVDKIEELEPALERAFELKDRVVFIDVAIDPEEHVYPMQVKFGS MQDMYLSQTERTDA >Mature_574_residues MEMLSGAEMVVRSLQDEGIEHIFGYPGGSVLDIYDAIFQSDKIEHYLVRHEQAAVHMADAYSRATGKVGCVLVTAGPGAT NCITGLVTAYMDSIPLVVLSGQVPTNWIGDDAFQEADMIGISRPVVKHSFSCRTAEDIPIAIKKAFYIASTGRPGPVVID LPKDVQSPLHKFPYEYPKSVELRSYKPTLSGHKGQIKRALAALLGAKKPVFYVGGGAIIANASKQVLELAEKLNLPVTNT LMGLGAFPGEHKQFIGMLGMHGTYEANLSMHNADLIFSAGARFDDRVTNNVDKFCPNAKIMQIDIDPTSISKNIHADLPI VGSIEVVLQQMLDLLEETKATNDSESINAWWDQINEWRAKDCLAYQTSETHIKPQQVIQCLYKVTKGDAIVTSDVGQHQM VAAQYYPFKEPRQWINSGGAGTMGFGLPAAMGCKIAFPDRPVVCVTGDGSIQMNIQELSTCMQYNIPVVILLLNNRSLGM VKQWQKMFYDGRQSHSYMDSVPDFVKLSEAYNHIGIKVDKIEELEPALERAFELKDRVVFIDVAIDPEEHVYPMQVKFGS MQDMYLSQTERTDA
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=576, Percent_Identity=27.7777777777778, Blast_Score=199, Evalue=8e-51, Organism=Homo sapiens, GI21361361, Length=511, Percent_Identity=27.5929549902153, Blast_Score=157, Evalue=2e-38, Organism=Escherichia coli, GI87081685, Length=574, Percent_Identity=65.6794425087108, Blast_Score=812, Evalue=0.0, Organism=Escherichia coli, GI1790104, Length=554, Percent_Identity=41.5162454873646, Blast_Score=417, Evalue=1e-118, Organism=Escherichia coli, GI1786717, Length=546, Percent_Identity=34.0659340659341, Blast_Score=318, Evalue=5e-88, Organism=Escherichia coli, GI1787096, Length=560, Percent_Identity=28.9285714285714, Blast_Score=206, Evalue=2e-54, Organism=Escherichia coli, GI1788716, Length=559, Percent_Identity=25.2236135957066, Blast_Score=171, Evalue=8e-44, Organism=Caenorhabditis elegans, GI17531299, Length=566, Percent_Identity=27.5618374558304, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17531301, Length=566, Percent_Identity=27.5618374558304, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI17542570, Length=519, Percent_Identity=26.5895953757225, Blast_Score=156, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6323755, Length=584, Percent_Identity=41.9520547945205, Blast_Score=448, Evalue=1e-126, Organism=Saccharomyces cerevisiae, GI6320816, Length=564, Percent_Identity=24.113475177305, Blast_Score=117, Evalue=7e-27, Organism=Drosophila melanogaster, GI19922626, Length=580, Percent_Identity=27.4137931034483, Blast_Score=200, Evalue=2e-51,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 63421; Mature: 63421
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMLSGAEMVVRSLQDEGIEHIFGYPGGSVLDIYDAIFQSDKIEHYLVRHEQAAVHMADA CCCCCHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH YSRATGKVGCVLVTAGPGATNCITGLVTAYMDSIPLVVLSGQVPTNWIGDDAFQEADMIG HHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHC ISRPVVKHSFSCRTAEDIPIAIKKAFYIASTGRPGPVVIDLPKDVQSPLHKFPYEYPKSV CCCHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEECCHHHHHHHHHCCCCCCCCC ELRSYKPTLSGHKGQIKRALAALLGAKKPVFYVGGGAIIANASKQVLELAEKLNLPVTNT EEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCHHHHHHHHHHCCCCHHHH LMGLGAFPGEHKQFIGMLGMHGTYEANLSMHNADLIFSAGARFDDRVTNNVDKFCPNAKI HHHCCCCCCCHHHHHHHHCCCCEEECCEEEECCCEEEECCCCCCHHHHCCHHHHCCCCEE MQIDIDPTSISKNIHADLPIVGSIEVVLQQMLDLLEETKATNDSESINAWWDQINEWRAK EEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH DCLAYQTSETHIKPQQVIQCLYKVTKGDAIVTSDVGQHQMVAAQYYPFKEPRQWINSGGA HHEEECCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCHHHHHHHHCCCC GTMGFGLPAAMGCKIAFPDRPVVCVTGDGSIQMNIQELSTCMQYNIPVVILLLNNRSLGM CCCCCCCHHHCCCEEECCCCCEEEEECCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCH VKQWQKMFYDGRQSHSYMDSVPDFVKLSEAYNHIGIKVDKIEELEPALERAFELKDRVVF HHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHCCCCEEE IDVAIDPEEHVYPMQVKFGSMQDMYLSQTERTDA EEEEECCCCCEEEEEEECCCCHHHHHHCCCCCCC >Mature Secondary Structure MEMLSGAEMVVRSLQDEGIEHIFGYPGGSVLDIYDAIFQSDKIEHYLVRHEQAAVHMADA CCCCCHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH YSRATGKVGCVLVTAGPGATNCITGLVTAYMDSIPLVVLSGQVPTNWIGDDAFQEADMIG HHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHC ISRPVVKHSFSCRTAEDIPIAIKKAFYIASTGRPGPVVIDLPKDVQSPLHKFPYEYPKSV CCCHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCEEEECCHHHHHHHHHCCCCCCCCC ELRSYKPTLSGHKGQIKRALAALLGAKKPVFYVGGGAIIANASKQVLELAEKLNLPVTNT EEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCEEEECCHHHHHHHHHHCCCCHHHH LMGLGAFPGEHKQFIGMLGMHGTYEANLSMHNADLIFSAGARFDDRVTNNVDKFCPNAKI HHHCCCCCCCHHHHHHHHCCCCEEECCEEEECCCEEEECCCCCCHHHHCCHHHHCCCCEE MQIDIDPTSISKNIHADLPIVGSIEVVLQQMLDLLEETKATNDSESINAWWDQINEWRAK EEEECCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH DCLAYQTSETHIKPQQVIQCLYKVTKGDAIVTSDVGQHQMVAAQYYPFKEPRQWINSGGA HHEEECCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCHHHHHHHHCCCC GTMGFGLPAAMGCKIAFPDRPVVCVTGDGSIQMNIQELSTCMQYNIPVVILLLNNRSLGM CCCCCCCHHHCCCEEECCCCCEEEEECCCCEEEEHHHHHHHHHCCCCEEEEEECCCCCCH VKQWQKMFYDGRQSHSYMDSVPDFVKLSEAYNHIGIKVDKIEELEPALERAFELKDRVVF HHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHCCCCEEE IDVAIDPEEHVYPMQVKFGSMQDMYLSQTERTDA EEEEECCCCCEEEEEEECCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6308579; 1630901; 9278503; 3891724; 9298646 [H]