Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119947019

Identifier: 119947019

GI number: 119947019

Start: 4220407

End: 4221102

Strand: Direct

Name: 119947019

Synonym: Ping_3416

Alternate gene names: NA

Gene position: 4220407-4221102 (Clockwise)

Preceding gene: 119947013

Following gene: 119947020

Centisome position: 92.56

GC content: 32.61

Gene sequence:

>696_bases
ATGAGTATAAATAGTAAAAAAAATAGGAATAAAAAAATAAATGATAAAAAAAATAGAGCCAAAGAAAAAGAAAAAAAGTT
CAGTTTGAAGAGTGGAAAGTTGATCAGTACTGCAGATGGGCAAGTTGTTAAATACCTTTATTTAACAAAAATAGAGCATG
TTGATACTTGGGTCAATGGTGGTGATATTCCAATAGCATTAGCCAGTACATATTTGAGTGATACCCGTTCTGGAATTATG
ACTCCAGATGAAAATTTAATACATGAATCACCAATTCCAATTCCATCATTAAAAAATATCGGAATTAGAATTGAGAATGT
ACGTAGCCTAACTATGACAAATTGTCGCGGAAACGGTATGAAAATACCGAACATGAAAAATGCTCATTATTATAAACAAG
ATGGCTTAATACTATCGTTTTGTAATTCGTTTAATAATGAAGTTGCATATAAGCTCGATAAAAAAGCATGTGTCAAAGTG
AATGATATTAAGGCACTTTGTGGGGTGATTGATAAGCAGTTGGGGAGAAAAGGAGTTATGCGTTCATGTCAGTATACTCA
TAGTCACAAACGAAATCACTTTTTGAAACATGTCGATGATTCTTGGCAAGATGAATTCAGGTTGTTTTGGCTTATCAAAG
AAAATAAAAGCGTGACTCTTCCTAGTGGTGTATGCGAGTTCGTTTCTGAATTTTAG

Upstream 100 bases:

>100_bases
GATATCATGAAGTTTGATGTTGCTGTGATTAGATTAATTATATGTTCATCTTCGTAGAGTTTAAGAAGCTTTTCATTGTC
TAAGTTGATTAGGAGCAGTT

Downstream 100 bases:

>100_bases
CATATCACCATAAGCTTATGGTGAACGAATTCGGGGACAGCCAAATCTTTTTATAAATAAACCAAACCAATGCGGCTACG
AATTCCCCGTCGATTTTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSINSKKNRNKKINDKKNRAKEKEKKFSLKSGKLISTADGQVVKYLYLTKIEHVDTWVNGGDIPIALASTYLSDTRSGIM
TPDENLIHESPIPIPSLKNIGIRIENVRSLTMTNCRGNGMKIPNMKNAHYYKQDGLILSFCNSFNNEVAYKLDKKACVKV
NDIKALCGVIDKQLGRKGVMRSCQYTHSHKRNHFLKHVDDSWQDEFRLFWLIKENKSVTLPSGVCEFVSEF

Sequences:

>Translated_231_residues
MSINSKKNRNKKINDKKNRAKEKEKKFSLKSGKLISTADGQVVKYLYLTKIEHVDTWVNGGDIPIALASTYLSDTRSGIM
TPDENLIHESPIPIPSLKNIGIRIENVRSLTMTNCRGNGMKIPNMKNAHYYKQDGLILSFCNSFNNEVAYKLDKKACVKV
NDIKALCGVIDKQLGRKGVMRSCQYTHSHKRNHFLKHVDDSWQDEFRLFWLIKENKSVTLPSGVCEFVSEF
>Mature_230_residues
SINSKKNRNKKINDKKNRAKEKEKKFSLKSGKLISTADGQVVKYLYLTKIEHVDTWVNGGDIPIALASTYLSDTRSGIMT
PDENLIHESPIPIPSLKNIGIRIENVRSLTMTNCRGNGMKIPNMKNAHYYKQDGLILSFCNSFNNEVAYKLDKKACVKVN
DIKALCGVIDKQLGRKGVMRSCQYTHSHKRNHFLKHVDDSWQDEFRLFWLIKENKSVTLPSGVCEFVSEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26384; Mature: 26253

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSINSKKNRNKKINDKKNRAKEKEKKFSLKSGKLISTADGQVVKYLYLTKIEHVDTWVNG
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEEHHHHHHHHHHHHCCCC
GDIPIALASTYLSDTRSGIMTPDENLIHESPIPIPSLKNIGIRIENVRSLTMTNCRGNGM
CCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCEEEECEEEEEEECCCCCCE
KIPNMKNAHYYKQDGLILSFCNSFNNEVAYKLDKKACVKVNDIKALCGVIDKQLGRKGVM
ECCCCCCCCEECCCCCCEEEHHHCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHCHHHHH
RSCQYTHSHKRNHFLKHVDDSWQDEFRLFWLIKENKSVTLPSGVCEFVSEF
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEECCHHHHHHHHCC
>Mature Secondary Structure 
SINSKKNRNKKINDKKNRAKEKEKKFSLKSGKLISTADGQVVKYLYLTKIEHVDTWVNG
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEEHHHHHHHHHHHHCCCC
GDIPIALASTYLSDTRSGIMTPDENLIHESPIPIPSLKNIGIRIENVRSLTMTNCRGNGM
CCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCEEEECEEEEEEECCCCCCE
KIPNMKNAHYYKQDGLILSFCNSFNNEVAYKLDKKACVKVNDIKALCGVIDKQLGRKGVM
ECCCCCCCCEECCCCCCEEEHHHCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHCHHHHH
RSCQYTHSHKRNHFLKHVDDSWQDEFRLFWLIKENKSVTLPSGVCEFVSEF
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA