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The map label for this gene is yaeB [H]

Identifier: 119946893

GI number: 119946893

Start: 4058122

End: 4058838

Strand: Direct

Name: yaeB [H]

Synonym: Ping_3287

Alternate gene names: 119946893

Gene position: 4058122-4058838 (Clockwise)

Preceding gene: 119946892

Following gene: 119946895

Centisome position: 89.0

GC content: 41.28

Gene sequence:

>717_bases
ATGGGGAATAACATAGTGTTTGATTCAATAGCGATAATCCATTCCCCCTATAAAGAGAAGTTTGCTGTGCCTCGCCAGCC
TGGGTTAGTTCCCAGTGCCATCGCTGAGCTGGAAATATTATTTCCTTATGATGATATTAACGCTTTTTTGGGTTTACAGG
AATTCAGTCATTTATGGTTAGTGTTTATTTTCCATAAAAATCGCAACCCAGATAAATGGAGTCCCACCGTACGACCGCCT
CGACTCGGTGGTAACAAACGCTTAGGTGTTTTTGCAACACGTTCACCCTGCCGTCCAAACCCCATTGGTTTATCACTGGT
TGAATTTCACGGCATTAAACAAGTTAATGGTAAGATTTTTTTAATGTTGAGTAATATCGATTTAGTCGATGGCACTCCAA
TTATTGATATCAAACCTTATATTCCCTATGCAGATTCAAAACCACAGGCGCTAGCCGGTTTTGCTCAGCTGCAGCCTGAA
TCCTTAATGCAGGTCGAATTTTCAACTGAGGCTCAAAAAGCAATTAACTTGCTTGAAGATGGCTACCCTGAACTGCAGCA
ATTGATTATTGAAGTACTGCAACAAGACCCGCGCCCTGCTTATAAAAAGACAAAAGAAGATCCAAAAAAATATGCAGTGC
ATCTTCTCGACTTTAATATCTCTTGGATTAATGCAGGGTCAACCACTACAGTGCTCGATGTTGAGCCACTGGTTTAG

Upstream 100 bases:

>100_bases
AACGGTATCGTTTTTCAAAACTGCTTGATTTTTGAACAAGACGCATCCTGCATCAGCAACATTATTTGTTATGCTCGTGC
TATTAGTGTGAAACTTTCTG

Downstream 100 bases:

>100_bases
CAAAATAATAGCCACTGGCAGCGCCGACTAATGCGCCTAACAGGTGACTCTCAAATGACACGCCAAATTTTGTTGGAAAG
ACGCCAAAAACTAATCCTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MGNNIVFDSIAIIHSPYKEKFAVPRQPGLVPSAIAELEILFPYDDINAFLGLQEFSHLWLVFIFHKNRNPDKWSPTVRPP
RLGGNKRLGVFATRSPCRPNPIGLSLVEFHGIKQVNGKIFLMLSNIDLVDGTPIIDIKPYIPYADSKPQALAGFAQLQPE
SLMQVEFSTEAQKAINLLEDGYPELQQLIIEVLQQDPRPAYKKTKEDPKKYAVHLLDFNISWINAGSTTTVLDVEPLV

Sequences:

>Translated_238_residues
MGNNIVFDSIAIIHSPYKEKFAVPRQPGLVPSAIAELEILFPYDDINAFLGLQEFSHLWLVFIFHKNRNPDKWSPTVRPP
RLGGNKRLGVFATRSPCRPNPIGLSLVEFHGIKQVNGKIFLMLSNIDLVDGTPIIDIKPYIPYADSKPQALAGFAQLQPE
SLMQVEFSTEAQKAINLLEDGYPELQQLIIEVLQQDPRPAYKKTKEDPKKYAVHLLDFNISWINAGSTTTVLDVEPLV
>Mature_237_residues
GNNIVFDSIAIIHSPYKEKFAVPRQPGLVPSAIAELEILFPYDDINAFLGLQEFSHLWLVFIFHKNRNPDKWSPTVRPPR
LGGNKRLGVFATRSPCRPNPIGLSLVEFHGIKQVNGKIFLMLSNIDLVDGTPIIDIKPYIPYADSKPQALAGFAQLQPES
LMQVEFSTEAQKAINLLEDGYPELQQLIIEVLQQDPRPAYKKTKEDPKKYAVHLLDFNISWINAGSTTTVLDVEPLV

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=147, Percent_Identity=40.8163265306122, Blast_Score=108, Evalue=6e-24,
Organism=Escherichia coli, GI1786393, Length=234, Percent_Identity=52.991452991453, Blast_Score=255, Evalue=2e-69,
Organism=Drosophila melanogaster, GI24586408, Length=163, Percent_Identity=42.3312883435583, Blast_Score=117, Evalue=5e-27,
Organism=Drosophila melanogaster, GI45552503, Length=284, Percent_Identity=31.6901408450704, Blast_Score=116, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 26759; Mature: 26628

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNNIVFDSIAIIHSPYKEKFAVPRQPGLVPSAIAELEILFPYDDINAFLGLQEFSHLWL
CCCCEEEEEEEEEECCHHHHCCCCCCCCCCHHHHHEEEEEECCHHHHHHHHHHHHCCEEE
VFIFHKNRNPDKWSPTVRPPRLGGNKRLGVFATRSPCRPNPIGLSLVEFHGIKQVNGKIF
EEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCEEECCCEEE
LMLSNIDLVDGTPIIDIKPYIPYADSKPQALAGFAQLQPESLMQVEFSTEAQKAINLLED
EEEECCEEECCCEEEEEECCCCCCCCCCHHHHHHHHCCCCHHEEEEECHHHHHHHHHHHC
GYPELQQLIIEVLQQDPRPAYKKTKEDPKKYAVHLLDFNISWINAGSTTTVLDVEPLV
CCHHHHHHHHHHHHCCCCCHHHCCCCCCHHEEEEEEEEEEEEEECCCEEEEEEECCCC
>Mature Secondary Structure 
GNNIVFDSIAIIHSPYKEKFAVPRQPGLVPSAIAELEILFPYDDINAFLGLQEFSHLWL
CCCEEEEEEEEEECCHHHHCCCCCCCCCCHHHHHEEEEEECCHHHHHHHHHHHHCCEEE
VFIFHKNRNPDKWSPTVRPPRLGGNKRLGVFATRSPCRPNPIGLSLVEFHGIKQVNGKIF
EEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCEEECCCEEE
LMLSNIDLVDGTPIIDIKPYIPYADSKPQALAGFAQLQPESLMQVEFSTEAQKAINLLED
EEEECCEEECCCEEEEEECCCCCCCCCCHHHHHHHHCCCCHHEEEEECHHHHHHHHHHHC
GYPELQQLIIEVLQQDPRPAYKKTKEDPKKYAVHLLDFNISWINAGSTTTVLDVEPLV
CCHHHHHHHHHHHHCCCCCHHHCCCCCCHHEEEEEEEEEEEEEECCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1459951; 9278503 [H]