BacMap

Definition	Psychromonas ingrahamii 37, complete genome.
Accession	NC_008709
Length	4,559,598

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The map label for this gene is rhlB

Identifier: 119946798

GI number: 119946798

Start: 3940160

End: 3941416

Strand: Direct

Name: rhlB

Synonym: Ping_3191

Alternate gene names: 119946798

Gene position: 3940160-3941416 (Clockwise)

Preceding gene: 119946786

Following gene: 119946799

Centisome position: 86.41

GC content: 38.82

Gene sequence:

>1257_bases
ATGAATAAAACACATCTAACTCAAACAAAATTTGCAGACCTTCCTTTAGAGAAAAGTCTAATTTCAGGTTTAACGTCGCA
AGGTTATGAATATTGTACTCCTATTCAGGCTTTGTCATTGCCAATCACCCTTACAGGGAAAGATATAGCAGGACAAGCTC
AAACAGGAACAGGTAAAACCCTAGCGTTTTTACCTGCGGTATTTCATCACCTATTAACCAATGCACAACCTGAAAATCGC
CGCAAGAATCAACCTCGGGCTATCATTTTAGCGCCGACACGTGAGCTTGCAATCCAAATACACAAAGATGCCATGGTTCT
TGCCAGCATGTCAAACTTACGTTTAGGTTTAGCATATGGGGGCGAGAAAGTTGAAATTCAACGTACTAAGCTGGAAAAAG
GCGTTGATATTTTAATTGGTACCACGGGCCGTACGATTGACTTTGTTAAACAGGGTGTTATCGATATGGGTTCTATACAA
AGTGTTGTCCTTGATGAAGCGGATCGCATGTTTGATCTTGGCTTTATTAAAGATATCCGTTATCTGTTTAGACGCATGCC
AGAAGCGAAATCACGTCTAAACATGTTGTTTTCAGCCACCCTGTCTCATAAAGTTCAAGAACTTGCTTTTGAGCATATGA
ATGATCCAGAAAGTATCCAGATTGAACCAGAAGTAATGACATCTGTGAATATAACTGAAGAACTTTTTTATCCTTCTAAT
CAAGATAAAATATTACTTTTATTAAGCCTAATAGAAGAAGATTGGCCTGACAAAGCGATTGTTTTTGCCAATACCAAACA
TACCTGTGAAAAAGTATGGGGTTATTTAGCGGGAGATGGCTTACGAACAGGCTTATTAACTGGCGATGTGCCTCAAAATA
AACGCTTAAAAATATTACAGCAGTTCACTGACGGTGAAATTGATATATTAGTTGCAACTGATGTGGCAGCTCGTGGTTTA
CATATTCCTAAAGTATCACATGTTTTTAATTTCGATCTGCCCGATGATTGTGAAGATTATGTGCATCGAATTGGTCGTAC
CGGACGTGCGGGTGAAAAAGGTTTGGCCATTAGTTTTGCCTGTGAAAAGTATGTCTTTAACCTTCCGGCAATTGAGGAAT
ATATTAAACATCCTATTCCTTGCAGTGAATATGATAAAAATGCGATGCTCGACTCTTTACCCGTAATGAAGGTAACAAAG
TACAAAGCACATCCGAATAGCCGTAAAGATAATTATCACCGTACTCATAAGCGATAG

Upstream 100 bases:

>100_bases
AAAAGAATTACTAATAATTAATTACTCTTATCTAAATTAATTTTTAATATTTGAATCGAACTCAATACTTATTGTATGTA
TAAAATGCTATCATTTGCAA

Downstream 100 bases:

>100_bases
AATGACCAACAACCGCTATACCATCATTGACCTTGGATCAAATAGCTTTCATATGCTAACTGTTGAAAGGATCAATAATG
GTTTTAGTGTTTATTCTAAA

Product: ATP-dependent RNA helicase RhlB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNKTHLTQTKFADLPLEKSLISGLTSQGYEYCTPIQALSLPITLTGKDIAGQAQTGTGKTLAFLPAVFHHLLTNAQPENR
RKNQPRAIILAPTRELAIQIHKDAMVLASMSNLRLGLAYGGEKVEIQRTKLEKGVDILIGTTGRTIDFVKQGVIDMGSIQ
SVVLDEADRMFDLGFIKDIRYLFRRMPEAKSRLNMLFSATLSHKVQELAFEHMNDPESIQIEPEVMTSVNITEELFYPSN
QDKILLLLSLIEEDWPDKAIVFANTKHTCEKVWGYLAGDGLRTGLLTGDVPQNKRLKILQQFTDGEIDILVATDVAARGL
HIPKVSHVFNFDLPDDCEDYVHRIGRTGRAGEKGLAISFACEKYVFNLPAIEEYIKHPIPCSEYDKNAMLDSLPVMKVTK
YKAHPNSRKDNYHRTHKR

Sequences:

>Translated_418_residues
MNKTHLTQTKFADLPLEKSLISGLTSQGYEYCTPIQALSLPITLTGKDIAGQAQTGTGKTLAFLPAVFHHLLTNAQPENR
RKNQPRAIILAPTRELAIQIHKDAMVLASMSNLRLGLAYGGEKVEIQRTKLEKGVDILIGTTGRTIDFVKQGVIDMGSIQ
SVVLDEADRMFDLGFIKDIRYLFRRMPEAKSRLNMLFSATLSHKVQELAFEHMNDPESIQIEPEVMTSVNITEELFYPSN
QDKILLLLSLIEEDWPDKAIVFANTKHTCEKVWGYLAGDGLRTGLLTGDVPQNKRLKILQQFTDGEIDILVATDVAARGL
HIPKVSHVFNFDLPDDCEDYVHRIGRTGRAGEKGLAISFACEKYVFNLPAIEEYIKHPIPCSEYDKNAMLDSLPVMKVTK
YKAHPNSRKDNYHRTHKR
>Mature_418_residues
MNKTHLTQTKFADLPLEKSLISGLTSQGYEYCTPIQALSLPITLTGKDIAGQAQTGTGKTLAFLPAVFHHLLTNAQPENR
RKNQPRAIILAPTRELAIQIHKDAMVLASMSNLRLGLAYGGEKVEIQRTKLEKGVDILIGTTGRTIDFVKQGVIDMGSIQ
SVVLDEADRMFDLGFIKDIRYLFRRMPEAKSRLNMLFSATLSHKVQELAFEHMNDPESIQIEPEVMTSVNITEELFYPSN
QDKILLLLSLIEEDWPDKAIVFANTKHTCEKVWGYLAGDGLRTGLLTGDVPQNKRLKILQQFTDGEIDILVATDVAARGL
HIPKVSHVFNFDLPDDCEDYVHRIGRTGRAGEKGLAISFACEKYVFNLPAIEEYIKHPIPCSEYDKNAMLDSLPVMKVTK
YKAHPNSRKDNYHRTHKR

Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain

Homologues:

Organism=Homo sapiens, GI87196351, Length=369, Percent_Identity=38.2113821138211, Blast_Score=235, Evalue=5e-62,
Organism=Homo sapiens, GI169881239, Length=367, Percent_Identity=38.1471389645777, Blast_Score=235, Evalue=5e-62,
Organism=Homo sapiens, GI13514809, Length=367, Percent_Identity=38.1471389645777, Blast_Score=235, Evalue=5e-62,
Organism=Homo sapiens, GI301171467, Length=369, Percent_Identity=38.2113821138211, Blast_Score=235, Evalue=5e-62,
Organism=Homo sapiens, GI301171475, Length=369, Percent_Identity=38.2113821138211, Blast_Score=235, Evalue=6e-62,
Organism=Homo sapiens, GI21071032, Length=381, Percent_Identity=34.1207349081365, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI224593278, Length=373, Percent_Identity=36.9973190348526, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI148613856, Length=341, Percent_Identity=39.0029325513196, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI38201710, Length=341, Percent_Identity=39.0029325513196, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI45446747, Length=357, Percent_Identity=36.1344537815126, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI45446743, Length=357, Percent_Identity=36.1344537815126, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI262118318, Length=354, Percent_Identity=35.8757062146893, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI216548263, Length=354, Percent_Identity=35.8757062146893, Blast_Score=211, Evalue=8e-55,
Organism=Homo sapiens, GI262231852, Length=354, Percent_Identity=35.8757062146893, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI13518015, Length=354, Percent_Identity=35.8757062146893, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI4758138, Length=354, Percent_Identity=37.0056497175141, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI222352149, Length=342, Percent_Identity=36.5497076023392, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI7661920, Length=370, Percent_Identity=33.5135135135135, Blast_Score=208, Evalue=1e-53,
Organism=Homo sapiens, GI41327771, Length=375, Percent_Identity=34.6666666666667, Blast_Score=201, Evalue=9e-52,
Organism=Homo sapiens, GI164664518, Length=400, Percent_Identity=31.25, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI50659095, Length=414, Percent_Identity=32.3671497584541, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI51094101, Length=362, Percent_Identity=32.3204419889503, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI164419743, Length=362, Percent_Identity=32.3204419889503, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI55749865, Length=347, Percent_Identity=32.8530259365994, Blast_Score=188, Evalue=9e-48,
Organism=Homo sapiens, GI41327773, Length=348, Percent_Identity=34.7701149425287, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI13129006, Length=357, Percent_Identity=33.6134453781513, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI20149629, Length=371, Percent_Identity=32.6145552560647, Blast_Score=185, Evalue=5e-47,
Organism=Homo sapiens, GI13514831, Length=385, Percent_Identity=32.7272727272727, Blast_Score=182, Evalue=8e-46,
Organism=Homo sapiens, GI188035877, Length=354, Percent_Identity=31.9209039548023, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI4758112, Length=357, Percent_Identity=29.4117647058824, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI18375623, Length=357, Percent_Identity=29.4117647058824, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI6005743, Length=386, Percent_Identity=33.419689119171, Blast_Score=172, Evalue=6e-43,
Organism=Homo sapiens, GI8922886, Length=386, Percent_Identity=33.419689119171, Blast_Score=171, Evalue=9e-43,
Organism=Homo sapiens, GI21040371, Length=357, Percent_Identity=29.1316526610644, Blast_Score=171, Evalue=9e-43,
Organism=Homo sapiens, GI38569503, Length=378, Percent_Identity=30.6878306878307, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI38569505, Length=378, Percent_Identity=30.6878306878307, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI31542656, Length=379, Percent_Identity=32.7176781002639, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI17505907, Length=410, Percent_Identity=31.9512195121951, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI41327779, Length=397, Percent_Identity=32.7455919395466, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI256223453, Length=365, Percent_Identity=29.3150684931507, Blast_Score=165, Evalue=9e-41,
Organism=Homo sapiens, GI62241022, Length=369, Percent_Identity=33.6043360433604, Blast_Score=162, Evalue=5e-40,
Organism=Homo sapiens, GI38327634, Length=388, Percent_Identity=31.9587628865979, Blast_Score=162, Evalue=7e-40,
Organism=Homo sapiens, GI164419732, Length=351, Percent_Identity=32.1937321937322, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI4503529, Length=374, Percent_Identity=32.3529411764706, Blast_Score=159, Evalue=6e-39,
Organism=Homo sapiens, GI83700235, Length=357, Percent_Identity=33.3333333333333, Blast_Score=158, Evalue=7e-39,
Organism=Homo sapiens, GI62241024, Length=348, Percent_Identity=33.9080459770115, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI41327776, Length=372, Percent_Identity=30.6451612903226, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI9506931, Length=402, Percent_Identity=28.3582089552239, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI256773275, Length=417, Percent_Identity=27.5779376498801, Blast_Score=133, Evalue=4e-31,
Organism=Homo sapiens, GI9966805, Length=321, Percent_Identity=28.3489096573209, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI4826686, Length=339, Percent_Identity=31.2684365781711, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI20336298, Length=220, Percent_Identity=37.2727272727273, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI154759257, Length=414, Percent_Identity=26.5700483091787, Blast_Score=115, Evalue=6e-26,
Organism=Escherichia coli, GI1790214, Length=419, Percent_Identity=63.0071599045346, Blast_Score=561, Evalue=1e-161,
Organism=Escherichia coli, GI1787016, Length=370, Percent_Identity=39.1891891891892, Blast_Score=264, Evalue=7e-72,
Organism=Escherichia coli, GI87082221, Length=386, Percent_Identity=38.860103626943, Blast_Score=259, Evalue=3e-70,
Organism=Escherichia coli, GI1788930, Length=384, Percent_Identity=36.1979166666667, Blast_Score=220, Evalue=1e-58,
Organism=Escherichia coli, GI1787605, Length=354, Percent_Identity=38.135593220339, Blast_Score=211, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI17510307, Length=365, Percent_Identity=39.4520547945205, Blast_Score=239, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI17510309, Length=365, Percent_Identity=39.4520547945205, Blast_Score=239, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI71995514, Length=365, Percent_Identity=39.4520547945205, Blast_Score=238, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=39.0243902439024, Blast_Score=228, Evalue=6e-60,
Organism=Caenorhabditis elegans, GI17507945, Length=364, Percent_Identity=35.989010989011, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17552642, Length=381, Percent_Identity=37.5328083989501, Blast_Score=217, Evalue=9e-57,
Organism=Caenorhabditis elegans, GI115533224, Length=355, Percent_Identity=37.1830985915493, Blast_Score=213, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=36.1185983827493, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI86570094, Length=368, Percent_Identity=36.9565217391304, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI71995724, Length=371, Percent_Identity=33.1536388140162, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=33.7874659400545, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17507121, Length=371, Percent_Identity=33.1536388140162, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17510559, Length=380, Percent_Identity=32.1052631578947, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17507879, Length=375, Percent_Identity=34.6666666666667, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI32565321, Length=357, Percent_Identity=34.1736694677871, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17507881, Length=367, Percent_Identity=34.3324250681199, Blast_Score=197, Evalue=9e-51,
Organism=Caenorhabditis elegans, GI17537549, Length=354, Percent_Identity=35.3107344632768, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17555296, Length=371, Percent_Identity=33.4231805929919, Blast_Score=194, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI71999646, Length=395, Percent_Identity=30.8860759493671, Blast_Score=188, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI71999644, Length=395, Percent_Identity=30.8860759493671, Blast_Score=187, Evalue=7e-48,
Organism=Caenorhabditis elegans, GI17509811, Length=401, Percent_Identity=32.1695760598504, Blast_Score=184, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI17552114, Length=374, Percent_Identity=31.0160427807487, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI115532548, Length=385, Percent_Identity=30.3896103896104, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI115532546, Length=385, Percent_Identity=30.3896103896104, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17505370, Length=354, Percent_Identity=34.180790960452, Blast_Score=165, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI71982858, Length=357, Percent_Identity=27.4509803921569, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=32.4607329842932, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17508543, Length=412, Percent_Identity=28.3980582524272, Blast_Score=154, Evalue=7e-38,
Organism=Caenorhabditis elegans, GI71990816, Length=349, Percent_Identity=31.8051575931232, Blast_Score=150, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI17507641, Length=389, Percent_Identity=29.5629820051414, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI32564046, Length=366, Percent_Identity=30.0546448087432, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17536099, Length=376, Percent_Identity=30.5851063829787, Blast_Score=140, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI17536101, Length=377, Percent_Identity=31.0344827586207, Blast_Score=139, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI193206561, Length=356, Percent_Identity=27.5280898876405, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI17553716, Length=364, Percent_Identity=29.1208791208791, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI17536103, Length=377, Percent_Identity=31.0344827586207, Blast_Score=135, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI25148203, Length=407, Percent_Identity=26.044226044226, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17556951, Length=348, Percent_Identity=29.5977011494253, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI25148291, Length=331, Percent_Identity=31.4199395770393, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI25148205, Length=333, Percent_Identity=25.2252252252252, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI71997889, Length=364, Percent_Identity=24.4505494505494, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=46.0674157303371, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17557982, Length=365, Percent_Identity=24.9315068493151, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=25.4807692307692, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17566630, Length=343, Percent_Identity=24.198250728863, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6324778, Length=423, Percent_Identity=36.8794326241135, Blast_Score=250, Evalue=2e-67,
Organism=Saccharomyces cerevisiae, GI6325138, Length=359, Percent_Identity=38.4401114206128, Blast_Score=247, Evalue=3e-66,
Organism=Saccharomyces cerevisiae, GI6324217, Length=360, Percent_Identity=38.0555555555556, Blast_Score=239, Evalue=4e-64,
Organism=Saccharomyces cerevisiae, GI6321360, Length=339, Percent_Identity=38.3480825958702, Blast_Score=220, Evalue=4e-58,
Organism=Saccharomyces cerevisiae, GI6323021, Length=359, Percent_Identity=35.933147632312, Blast_Score=214, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6321856, Length=381, Percent_Identity=34.3832020997375, Blast_Score=199, Evalue=8e-52,
Organism=Saccharomyces cerevisiae, GI6323947, Length=386, Percent_Identity=34.7150259067358, Blast_Score=193, Evalue=4e-50,
Organism=Saccharomyces cerevisiae, GI6320224, Length=393, Percent_Identity=31.2977099236641, Blast_Score=192, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6320041, Length=363, Percent_Identity=32.2314049586777, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6322427, Length=358, Percent_Identity=34.3575418994413, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6320449, Length=347, Percent_Identity=34.0057636887608, Blast_Score=179, Evalue=8e-46,
Organism=Saccharomyces cerevisiae, GI6322912, Length=377, Percent_Identity=32.3607427055703, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6322323, Length=377, Percent_Identity=32.3607427055703, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6319714, Length=378, Percent_Identity=30.4232804232804, Blast_Score=169, Evalue=8e-43,
Organism=Saccharomyces cerevisiae, GI6321963, Length=407, Percent_Identity=31.4496314496315, Blast_Score=168, Evalue=1e-42,
Organism=Saccharomyces cerevisiae, GI6324620, Length=391, Percent_Identity=30.690537084399, Blast_Score=167, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6321111, Length=361, Percent_Identity=31.3019390581717, Blast_Score=159, Evalue=5e-40,
Organism=Saccharomyces cerevisiae, GI6320400, Length=392, Percent_Identity=32.1428571428571, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6320119, Length=362, Percent_Identity=27.3480662983425, Blast_Score=153, Evalue=5e-38,
Organism=Saccharomyces cerevisiae, GI6321267, Length=363, Percent_Identity=30.8539944903581, Blast_Score=145, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6323306, Length=413, Percent_Identity=26.8765133171913, Blast_Score=137, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6319618, Length=408, Percent_Identity=28.4313725490196, Blast_Score=137, Evalue=3e-33,
Organism=Saccharomyces cerevisiae, GI6322876, Length=489, Percent_Identity=28.4253578732106, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6320173, Length=254, Percent_Identity=32.2834645669291, Blast_Score=126, Evalue=8e-30,
Organism=Saccharomyces cerevisiae, GI6324366, Length=351, Percent_Identity=25.6410256410256, Blast_Score=98, Evalue=3e-21,
Organism=Drosophila melanogaster, GI17985987, Length=372, Percent_Identity=37.9032258064516, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI21356161, Length=359, Percent_Identity=38.1615598885794, Blast_Score=229, Evalue=3e-60,
Organism=Drosophila melanogaster, GI24644479, Length=359, Percent_Identity=37.6044568245125, Blast_Score=228, Evalue=8e-60,
Organism=Drosophila melanogaster, GI24644483, Length=359, Percent_Identity=37.6044568245125, Blast_Score=228, Evalue=9e-60,
Organism=Drosophila melanogaster, GI24644487, Length=359, Percent_Identity=37.6044568245125, Blast_Score=227, Evalue=9e-60,
Organism=Drosophila melanogaster, GI45551833, Length=359, Percent_Identity=37.6044568245125, Blast_Score=227, Evalue=9e-60,
Organism=Drosophila melanogaster, GI24644485, Length=359, Percent_Identity=37.6044568245125, Blast_Score=227, Evalue=9e-60,
Organism=Drosophila melanogaster, GI281361218, Length=359, Percent_Identity=37.6044568245125, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24644481, Length=359, Percent_Identity=37.6044568245125, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24584399, Length=349, Percent_Identity=35.8166189111748, Blast_Score=224, Evalue=7e-59,
Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=35.1123595505618, Blast_Score=224, Evalue=8e-59,
Organism=Drosophila melanogaster, GI28574962, Length=345, Percent_Identity=38.8405797101449, Blast_Score=224, Evalue=8e-59,
Organism=Drosophila melanogaster, GI24662330, Length=357, Percent_Identity=37.5350140056022, Blast_Score=221, Evalue=9e-58,
Organism=Drosophila melanogaster, GI24645031, Length=370, Percent_Identity=33.7837837837838, Blast_Score=208, Evalue=5e-54,
Organism=Drosophila melanogaster, GI21355075, Length=352, Percent_Identity=36.3636363636364, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI18857967, Length=361, Percent_Identity=36.5650969529086, Blast_Score=206, Evalue=4e-53,
Organism=Drosophila melanogaster, GI24584994, Length=368, Percent_Identity=35.3260869565217, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24585582, Length=353, Percent_Identity=33.1444759206799, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI28575014, Length=373, Percent_Identity=31.9034852546917, Blast_Score=192, Evalue=3e-49,
Organism=Drosophila melanogaster, GI24642151, Length=354, Percent_Identity=34.4632768361582, Blast_Score=190, Evalue=1e-48,
Organism=Drosophila melanogaster, GI281365720, Length=306, Percent_Identity=37.5816993464052, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI24642822, Length=421, Percent_Identity=31.8289786223278, Blast_Score=182, Evalue=5e-46,
Organism=Drosophila melanogaster, GI24583281, Length=383, Percent_Identity=29.7650130548303, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI24583279, Length=383, Percent_Identity=29.7650130548303, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI17136814, Length=381, Percent_Identity=32.5459317585302, Blast_Score=174, Evalue=7e-44,
Organism=Drosophila melanogaster, GI17647335, Length=364, Percent_Identity=31.5934065934066, Blast_Score=173, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24582080, Length=373, Percent_Identity=32.9758713136729, Blast_Score=172, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24582078, Length=373, Percent_Identity=32.9758713136729, Blast_Score=172, Evalue=3e-43,
Organism=Drosophila melanogaster, GI17136248, Length=373, Percent_Identity=32.9758713136729, Blast_Score=172, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24582075, Length=373, Percent_Identity=32.9758713136729, Blast_Score=172, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24643725, Length=393, Percent_Identity=28.498727735369, Blast_Score=169, Evalue=2e-42,
Organism=Drosophila melanogaster, GI28571808, Length=363, Percent_Identity=31.9559228650138, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI28571809, Length=363, Percent_Identity=31.9559228650138, Blast_Score=167, Evalue=2e-41,
Organism=Drosophila melanogaster, GI24581954, Length=360, Percent_Identity=28.8888888888889, Blast_Score=166, Evalue=2e-41,
Organism=Drosophila melanogaster, GI24581952, Length=360, Percent_Identity=28.8888888888889, Blast_Score=166, Evalue=2e-41,
Organism=Drosophila melanogaster, GI24581956, Length=360, Percent_Identity=28.8888888888889, Blast_Score=166, Evalue=2e-41,
Organism=Drosophila melanogaster, GI19920478, Length=335, Percent_Identity=32.5373134328358, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI20130173, Length=428, Percent_Identity=29.9065420560748, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24666101, Length=423, Percent_Identity=27.8959810874704, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI18859659, Length=426, Percent_Identity=28.8732394366197, Blast_Score=151, Evalue=1e-36,
Organism=Drosophila melanogaster, GI28571338, Length=426, Percent_Identity=28.8732394366197, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI21355559, Length=400, Percent_Identity=31, Blast_Score=149, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=30.5810397553517, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24640164, Length=350, Percent_Identity=25.4285714285714, Blast_Score=112, Evalue=7e-25,
Organism=Drosophila melanogaster, GI17136666, Length=420, Percent_Identity=26.9047619047619, Blast_Score=111, Evalue=9e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RHLB_PSYIN (A1SZG4)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_944478.1
- ProteinModelPortal:   A1SZG4
- SMR:   A1SZG4
- STRING:   A1SZG4
- GeneID:   4624796
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_3191
- eggNOG:   COG0513
- HOGENOM:   HBG737336
- OMA:   SRLNMLF
- PhylomeDB:   A1SZG4
- ProtClustDB:   PRK04837
- BioCyc:   PING357804:PING_3191-MONOMER
- HAMAP:   MF_00661
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014
- SMART:   SM00487
- SMART:   SM00490

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C

EC number: =3.6.4.13

Molecular weight: Translated: 47015; Mature: 47015

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS00039 DEAD_ATP_HELICASE; PS51192 HELICASE_ATP_BIND_1; PS51194 HELICASE_CTER; PS51195 Q_MOTIF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTHLTQTKFADLPLEKSLISGLTSQGYEYCTPIQALSLPITLTGKDIAGQAQTGTGKT
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHEEEEEECCCCCCCCCCCCCCCH
LAFLPAVFHHLLTNAQPENRRKNQPRAIILAPTRELAIQIHKDAMVLASMSNLRLGLAYG
HHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCHHHEEEECCCCEEEEECCCCEEEEEEC
GEKVEIQRTKLEKGVDILIGTTGRTIDFVKQGVIDMGSIQSVVLDEADRMFDLGFIKDIR
CCEEEEEHHHHHCCCEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YLFRRMPEAKSRLNMLFSATLSHKVQELAFEHMNDPESIQIEPEVMTSVNITEELFYPSN
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHEECCCHHHHCCCCC
QDKILLLLSLIEEDWPDKAIVFANTKHTCEKVWGYLAGDGLRTGLLTGDVPQNKRLKILQ
CCCEEHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCEECCEECCCCCCHHHHHHH
QFTDGEIDILVATDVAARGLHIPKVSHVFNFDLPDDCEDYVHRIGRTGRAGEKGLAISFA
HHCCCCEEEEEECCHHHCCCCCCCHHHEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
CEKYVFNLPAIEEYIKHPIPCSEYDKNAMLDSLPVMKVTKYKAHPNSRKDNYHRTHKR
HHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MNKTHLTQTKFADLPLEKSLISGLTSQGYEYCTPIQALSLPITLTGKDIAGQAQTGTGKT
CCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHEEEEEECCCCCCCCCCCCCCCH
LAFLPAVFHHLLTNAQPENRRKNQPRAIILAPTRELAIQIHKDAMVLASMSNLRLGLAYG
HHHHHHHHHHHHCCCCCCHHCCCCCCEEEEECCHHHEEEECCCCEEEEECCCCEEEEEEC
GEKVEIQRTKLEKGVDILIGTTGRTIDFVKQGVIDMGSIQSVVLDEADRMFDLGFIKDIR
CCEEEEEHHHHHCCCEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
YLFRRMPEAKSRLNMLFSATLSHKVQELAFEHMNDPESIQIEPEVMTSVNITEELFYPSN
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECHHHHEECCCHHHHCCCCC
QDKILLLLSLIEEDWPDKAIVFANTKHTCEKVWGYLAGDGLRTGLLTGDVPQNKRLKILQ
CCCEEHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCEECCEECCCCCCHHHHHHH
QFTDGEIDILVATDVAARGLHIPKVSHVFNFDLPDDCEDYVHRIGRTGRAGEKGLAISFA
HHCCCCEEEEEECCHHHCCCCCCCHHHEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
CEKYVFNLPAIEEYIKHPIPCSEYDKNAMLDSLPVMKVTKYKAHPNSRKDNYHRTHKR
HHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA