Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119946677

Identifier: 119946677

GI number: 119946677

Start: 3756715

End: 3757152

Strand: Reverse

Name: 119946677

Synonym: Ping_3058

Alternate gene names: NA

Gene position: 3757152-3756715 (Counterclockwise)

Preceding gene: 119946678

Following gene: 119946676

Centisome position: 82.4

GC content: 41.1

Gene sequence:

>438_bases
TTGTTGAAAGCGCTGCGGCCTAAAAGCCGCAGCGCTTTTTTTTATATGACTGAGACAATGAAGAAAATTTTTCTGGTGTT
ATTTGTACTCTATTCAGGGTCTGTTTTTTCTCTGGAGACCGTCAGAGTGAAAAATGCCGAACTGAACGAGCTCTATCTGT
ATAACGGCAGCAGGTTGGAGGTCATTCCCGCGGAAGGGGTGATTGTTTATGTCGAGGGCAATGCAAATAAAAGAGTAAAG
TTAACAATTAAGGCGACTGGAGCTGTCTATCTGACCTCTGGAGTGAGAATTGACAATCTCAGGGCTAAAAATCCGATTAT
AAGGCTCGATAAATACGGCGAAGGACAGTTTGAAATAGGGTTTTCTCTGCTGGGGGAAAAAAAAGTCAGCGGTAAACACA
AAAAACAGATAAAGTATGAGATTGAATATTTAGACTAA

Upstream 100 bases:

>100_bases
AAAAATTGTAGATGGTGCGGACGTAGCTGAGACTATAACAGTTACAGTTACTTATGATTCAATAGATAGCACAACAAATA
CAACAGCAGCTTAATAGCTA

Downstream 100 bases:

>100_bases
CTGAATATCCTACCCGTTTACCATTTCCTATCCACTTGTGTTCAACTATTCAACTATTCAACTATTTAACTATTTAACTA
TTTAACTATTTAACTATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MLKALRPKSRSAFFYMTETMKKIFLVLFVLYSGSVFSLETVRVKNAELNELYLYNGSRLEVIPAEGVIVYVEGNANKRVK
LTIKATGAVYLTSGVRIDNLRAKNPIIRLDKYGEGQFEIGFSLLGEKKVSGKHKKQIKYEIEYLD

Sequences:

>Translated_145_residues
MLKALRPKSRSAFFYMTETMKKIFLVLFVLYSGSVFSLETVRVKNAELNELYLYNGSRLEVIPAEGVIVYVEGNANKRVK
LTIKATGAVYLTSGVRIDNLRAKNPIIRLDKYGEGQFEIGFSLLGEKKVSGKHKKQIKYEIEYLD
>Mature_145_residues
MLKALRPKSRSAFFYMTETMKKIFLVLFVLYSGSVFSLETVRVKNAELNELYLYNGSRLEVIPAEGVIVYVEGNANKRVK
LTIKATGAVYLTSGVRIDNLRAKNPIIRLDKYGEGQFEIGFSLLGEKKVSGKHKKQIKYEIEYLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16520; Mature: 16520

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKALRPKSRSAFFYMTETMKKIFLVLFVLYSGSVFSLETVRVKNAELNELYLYNGSRLE
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCCEEE
VIPAEGVIVYVEGNANKRVKLTIKATGAVYLTSGVRIDNLRAKNPIIRLDKYGEGQFEIG
EEECCCEEEEEECCCCCEEEEEEEECCEEEEECCEEEECEECCCCEEEEECCCCCEEEEE
FSLLGEKKVSGKHKKQIKYEIEYLD
EEEECCCCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure
MLKALRPKSRSAFFYMTETMKKIFLVLFVLYSGSVFSLETVRVKNAELNELYLYNGSRLE
CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEECCCEEE
VIPAEGVIVYVEGNANKRVKLTIKATGAVYLTSGVRIDNLRAKNPIIRLDKYGEGQFEIG
EEECCCEEEEEECCCCCEEEEEEEECCEEEEECCEEEECEECCCCEEEEECCCCCEEEEE
FSLLGEKKVSGKHKKQIKYEIEYLD
EEEECCCCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA