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The map label for this gene is rsmC

Identifier: 119946653

GI number: 119946653

Start: 3729827

End: 3730876

Strand: Direct

Name: rsmC

Synonym: Ping_3032

Alternate gene names: 119946653

Gene position: 3729827-3730876 (Clockwise)

Preceding gene: 119946652

Following gene: 119946654

Centisome position: 81.8

GC content: 36.76

Gene sequence:

>1050_bases
ATGTCACTTGCGAATCACACATTTTCAAATCCCAGCCGAGTATTGCAACGCAATGAATCCCTTTTTACAAACAAGAATAT
TCTCGTTGCAGGTAACATTGATGATGAGTATCCGTTGCAGTTACAGGCATTAGCCAATTCATCTACCTTTTGTTTCAGTG
ATTATCGTTATTATAGTGTGTTAAAAGATAAATTAACGACATCTGAGGTGCACTTTACCGATAACTATCAGGGTGAAACA
AAATTTGACCTGTTACTGATTTTTTTACCTAAAGCAAAGCAGGAAACTTTGTACTTATTAGCGAATCTCACCCCCCATTT
GCAACCAGGAGCGAGTATTATTTTAGTGGGTGAAAAAAAATGTGGCATCAAGAGTGCCGACTCATTATTAGCGTCCTATT
CAAACAGAATAAATATGATTGATTCAGCTCGCCACTGCAGTATTCTCCATGCTGAATTAAATCAACCGGTCAACGCCTTC
ACACAATCACAATGGATAAAAACTTACCCATTAAACATCAATAATACTGAGTTACAGATCTGTTCTTTACCGGGTGTTTT
TAGCTATGGAGAATTAGATAAAGGCAGTGAGTTATTATTACAAAACTTACCCGATAAAATGTCTGGCAGAGTGCTTGATT
TTGGATGTGGCGCGGGTGTTATTGCATGTTATGTTTTAAAAAAACACCCGCAACTTAGCGTTGATCTTGTGGATATTAAC
GCCTTTGCTTTAGCGAGTGCAAAGTTATCACTGCAAAGCAATCAACTAGAAGGCAACGTCTTCCCATCAAACGTATTTTC
AGACATCAAAGAAAAATATAATATACTGCTTTCTAACCCGCCTTTTCATTCCGGAAAAAACACCGACTATACCGCTGCAG
AAACCTTTATAAACCAATCAACTAACCACCTGAAATCAAAAGGGAAACTGTCTATTGTAGCGAATAGATTTTTGAACTAC
GAAGGGTTACTTTTTAAGGCTTTTTCAAACGTAAAAATAGATCAAGAAAGCAATAAATTTAAAGTGTTGAGTTGCATCAC
AAAAACTTGA

Upstream 100 bases:

>100_bases
TATAAAAATAACAATATAATGCGCGCATCCATTAATATCAACTTACCCATTAATATGAACTTACTCCGATTTTGAGTAGA
GTTAACAACAGGAAAACCCA

Downstream 100 bases:

>100_bases
TAAATAATAAAAAACTGACATAGTCTTCGTATATGATGGAAGTATTGCATTAACCTTGGGAAATTGCCTCGTTATGTACT
ACGCATAACATTCATCTTAC

Product: rRNA (guanine-N(2)-)-methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MSLANHTFSNPSRVLQRNESLFTNKNILVAGNIDDEYPLQLQALANSSTFCFSDYRYYSVLKDKLTTSEVHFTDNYQGET
KFDLLLIFLPKAKQETLYLLANLTPHLQPGASIILVGEKKCGIKSADSLLASYSNRINMIDSARHCSILHAELNQPVNAF
TQSQWIKTYPLNINNTELQICSLPGVFSYGELDKGSELLLQNLPDKMSGRVLDFGCGAGVIACYVLKKHPQLSVDLVDIN
AFALASAKLSLQSNQLEGNVFPSNVFSDIKEKYNILLSNPPFHSGKNTDYTAAETFINQSTNHLKSKGKLSIVANRFLNY
EGLLFKAFSNVKIDQESNKFKVLSCITKT

Sequences:

>Translated_349_residues
MSLANHTFSNPSRVLQRNESLFTNKNILVAGNIDDEYPLQLQALANSSTFCFSDYRYYSVLKDKLTTSEVHFTDNYQGET
KFDLLLIFLPKAKQETLYLLANLTPHLQPGASIILVGEKKCGIKSADSLLASYSNRINMIDSARHCSILHAELNQPVNAF
TQSQWIKTYPLNINNTELQICSLPGVFSYGELDKGSELLLQNLPDKMSGRVLDFGCGAGVIACYVLKKHPQLSVDLVDIN
AFALASAKLSLQSNQLEGNVFPSNVFSDIKEKYNILLSNPPFHSGKNTDYTAAETFINQSTNHLKSKGKLSIVANRFLNY
EGLLFKAFSNVKIDQESNKFKVLSCITKT
>Mature_348_residues
SLANHTFSNPSRVLQRNESLFTNKNILVAGNIDDEYPLQLQALANSSTFCFSDYRYYSVLKDKLTTSEVHFTDNYQGETK
FDLLLIFLPKAKQETLYLLANLTPHLQPGASIILVGEKKCGIKSADSLLASYSNRINMIDSARHCSILHAELNQPVNAFT
QSQWIKTYPLNINNTELQICSLPGVFSYGELDKGSELLLQNLPDKMSGRVLDFGCGAGVIACYVLKKHPQLSVDLVDINA
FALASAKLSLQSNQLEGNVFPSNVFSDIKEKYNILLSNPPFHSGKNTDYTAAETFINQSTNHLKSKGKLSIVANRFLNYE
GLLFKAFSNVKIDQESNKFKVLSCITKT

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family

Homologues:

Organism=Escherichia coli, GI1790830, Length=343, Percent_Identity=36.734693877551, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI87082206, Length=186, Percent_Identity=36.0215053763441, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMC_PSYIN (A1SZ19)

Other databases:

- EMBL:   CP000510
- RefSeq:   YP_944333.1
- ProteinModelPortal:   A1SZ19
- STRING:   A1SZ19
- GeneID:   4625118
- GenomeReviews:   CP000510_GR
- KEGG:   pin:Ping_3032
- eggNOG:   COG2813
- HOGENOM:   HBG296757
- OMA:   TGKFKVY
- PhylomeDB:   A1SZ19
- BioCyc:   PING357804:PING_3032-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01862
- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR002296
- InterPro:   IPR007848
- PRINTS:   PR00507

Pfam domain/function: PF05175 MTS; PF08468 MTS_N

EC number: =2.1.1.172

Molecular weight: Translated: 38886; Mature: 38755

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLANHTFSNPSRVLQRNESLFTNKNILVAGNIDDEYPLQLQALANSSTFCFSDYRYYSV
CCCCCCCCCCHHHHHHCCCCEEECCCEEEECCCCCCCCEEEEEECCCCEEEEECCHHHHH
LKDKLTTSEVHFTDNYQGETKFDLLLIFLPKAKQETLYLLANLTPHLQPGASIILVGEKK
HHHHCCCCEEEEECCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCC
CGIKSADSLLASYSNRINMIDSARHCSILHAELNQPVNAFTQSQWIKTYPLNINNTELQI
CCCCHHHHHHHHHHCCCCCCCCCCHHEEEEHHHCCCHHHHHHCCCEEEECCCCCCCEEEE
CSLPGVFSYGELDKGSELLLQNLPDKMSGRVLDFGCGAGVIACYVLKKHPQLSVDLVDIN
EECCCCCCCCCCCCCHHHHHHCCCHHHCCCEEEECCCHHHHHHHHHHCCCCCEEEEEECC
AFALASAKLSLQSNQLEGNVFPSNVFSDIKEKYNILLSNPPFHSGKNTDYTAAETFINQS
EEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCEEEECCCCCCCCCCCCCHHHHHHHHCC
TNHLKSKGKLSIVANRFLNYEGLLFKAFSNVKIDQESNKFKVLSCITKT
HHHHHCCCCEEEEEHHHCCCCCEEEEEECCCEEECCCCCEEEEEEEECC
>Mature Secondary Structure 
SLANHTFSNPSRVLQRNESLFTNKNILVAGNIDDEYPLQLQALANSSTFCFSDYRYYSV
CCCCCCCCCHHHHHHCCCCEEECCCEEEECCCCCCCCEEEEEECCCCEEEEECCHHHHH
LKDKLTTSEVHFTDNYQGETKFDLLLIFLPKAKQETLYLLANLTPHLQPGASIILVGEKK
HHHHCCCCEEEEECCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCC
CGIKSADSLLASYSNRINMIDSARHCSILHAELNQPVNAFTQSQWIKTYPLNINNTELQI
CCCCHHHHHHHHHHCCCCCCCCCCHHEEEEHHHCCCHHHHHHCCCEEEECCCCCCCEEEE
CSLPGVFSYGELDKGSELLLQNLPDKMSGRVLDFGCGAGVIACYVLKKHPQLSVDLVDIN
EECCCCCCCCCCCCCHHHHHHCCCHHHCCCEEEECCCHHHHHHHHHHCCCCCEEEEEECC
AFALASAKLSLQSNQLEGNVFPSNVFSDIKEKYNILLSNPPFHSGKNTDYTAAETFINQS
EEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCEEEECCCCCCCCCCCCCHHHHHHHHCC
TNHLKSKGKLSIVANRFLNYEGLLFKAFSNVKIDQESNKFKVLSCITKT
HHHHHCCCCEEEEEHHHCCCCCEEEEEECCCEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA