| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is mlaA [H]
Identifier: 119946636
GI number: 119946636
Start: 3714957
End: 3715727
Strand: Reverse
Name: mlaA [H]
Synonym: Ping_3015
Alternate gene names: 119946636
Gene position: 3715727-3714957 (Counterclockwise)
Preceding gene: 119946637
Following gene: 119946635
Centisome position: 81.49
GC content: 38.39
Gene sequence:
>771_bases ATGCTAAAATTAACTTTTTTTATTTTTTTGCTGTTTTCAACTGCGCCGTTTGCGCAAACGGTTAATGGCGATAGTCAATA TCAAATGAGTGATCCTATTGAACCTGTTAACCGTCTTATTTGGGAATTTAACTATAAGGTGTTGGACACTTACCTATACC GTCCAGTAACAAAAAGTTATATTTATGTAATGCCAAATAATGGCCGCAGAGCGATTCACAATTTTGTCTTAAATCTTGAA GAGCCGACAACGGTATTAAATAATTTAATACAGTTTGAGTTTAAGCATTCATTTGATGCATTAATGCGGTTTACCCTTAA CTCTACTTTTGGAATTTTCGGGTTGATAGATGTAGGCAGTTCAATTGGGATTGAGCGACGTAGAGAAAATTTTAGTAACG TGCTTGGAAGATGGTCAGTGCCAAATGGCCCGTATTTGATGGTACCGGTGATCGGGCCTCGCAGCACGCGGAAATTGGTT GGGGATGTTGTCGACAGGTTGTTTTTTCCGACCAGTTACCTTAGCTTTTGGCAAAATGTAGGTGTGTGGGGGCTTGATGG TGCCGAAATACGGGCAGGATTTATCGATAAGGAACCCCTTCTTGAACAATCGCTGGATCCCTATTTATTTGTTAAAGAAG CCTACATTCAGTATGAAGCCTTTCAGTTTTACTCTAACAGTACAGATATCGAGCACTTTATAAAGAAAACGACTCAAGAG CAAAAAGAAGTAGAGCAAAACTTGAATGAATTTATGGATGAAATAAATTAA
Upstream 100 bases:
>100_bases GGTATCGGATACTGTAGATTCATAATAAGTGACGCTGTATTTTCCCGTTGTAAAATCATACAAACTGGGTATCTACTTTA AGAACAAAGAGTATTCCAAT
Downstream 100 bases:
>100_bases TTTTTATAGTGATGGCAACTATCACCACTATTTGATTAGCTTTAGTTTTTGGTAATCACAATTTTTAAATATAATTTTTA AGCGATCCAAGGAGTTTATG
Product: VacJ family lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MLKLTFFIFLLFSTAPFAQTVNGDSQYQMSDPIEPVNRLIWEFNYKVLDTYLYRPVTKSYIYVMPNNGRRAIHNFVLNLE EPTTVLNNLIQFEFKHSFDALMRFTLNSTFGIFGLIDVGSSIGIERRRENFSNVLGRWSVPNGPYLMVPVIGPRSTRKLV GDVVDRLFFPTSYLSFWQNVGVWGLDGAEIRAGFIDKEPLLEQSLDPYLFVKEAYIQYEAFQFYSNSTDIEHFIKKTTQE QKEVEQNLNEFMDEIN
Sequences:
>Translated_256_residues MLKLTFFIFLLFSTAPFAQTVNGDSQYQMSDPIEPVNRLIWEFNYKVLDTYLYRPVTKSYIYVMPNNGRRAIHNFVLNLE EPTTVLNNLIQFEFKHSFDALMRFTLNSTFGIFGLIDVGSSIGIERRRENFSNVLGRWSVPNGPYLMVPVIGPRSTRKLV GDVVDRLFFPTSYLSFWQNVGVWGLDGAEIRAGFIDKEPLLEQSLDPYLFVKEAYIQYEAFQFYSNSTDIEHFIKKTTQE QKEVEQNLNEFMDEIN >Mature_256_residues MLKLTFFIFLLFSTAPFAQTVNGDSQYQMSDPIEPVNRLIWEFNYKVLDTYLYRPVTKSYIYVMPNNGRRAIHNFVLNLE EPTTVLNNLIQFEFKHSFDALMRFTLNSTFGIFGLIDVGSSIGIERRRENFSNVLGRWSVPNGPYLMVPVIGPRSTRKLV GDVVDRLFFPTSYLSFWQNVGVWGLDGAEIRAGFIDKEPLLEQSLDPYLFVKEAYIQYEAFQFYSNSTDIEHFIKKTTQE QKEVEQNLNEFMDEIN
Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane [H]
COG id: COG2853
COG function: function code M; Surface lipoprotein
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaA family [H]
Homologues:
Organism=Escherichia coli, GI1788688, Length=223, Percent_Identity=35.4260089686099, Blast_Score=139, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007428 [H]
Pfam domain/function: PF04333 VacJ [H]
EC number: NA
Molecular weight: Translated: 29860; Mature: 29860
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLTFFIFLLFSTAPFAQTVNGDSQYQMSDPIEPVNRLIWEFNYKVLDTYLYRPVTKSY CHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE IYVMPNNGRRAIHNFVLNLEEPTTVLNNLIQFEFKHSFDALMRFTLNSTFGIFGLIDVGS EEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCC SIGIERRRENFSNVLGRWSVPNGPYLMVPVIGPRSTRKLVGDVVDRLFFPTSYLSFWQNV CCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHCC GVWGLDGAEIRAGFIDKEPLLEQSLDPYLFVKEAYIQYEAFQFYSNSTDIEHFIKKTTQE CCCCCCCHHHEECCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH QKEVEQNLNEFMDEIN HHHHHHHHHHHHHHCC >Mature Secondary Structure MLKLTFFIFLLFSTAPFAQTVNGDSQYQMSDPIEPVNRLIWEFNYKVLDTYLYRPVTKSY CHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE IYVMPNNGRRAIHNFVLNLEEPTTVLNNLIQFEFKHSFDALMRFTLNSTFGIFGLIDVGS EEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHCCC SIGIERRRENFSNVLGRWSVPNGPYLMVPVIGPRSTRKLVGDVVDRLFFPTSYLSFWQNV CCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHCC GVWGLDGAEIRAGFIDKEPLLEQSLDPYLFVKEAYIQYEAFQFYSNSTDIEHFIKKTTQE CCCCCCCHHHEECCCCCCHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH QKEVEQNLNEFMDEIN HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]