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The map label for this gene is 119946541

Identifier: 119946541

GI number: 119946541

Start: 3602371

End: 3603513

Strand: Direct

Name: 119946541

Synonym: Ping_2920

Alternate gene names: NA

Gene position: 3602371-3603513 (Clockwise)

Preceding gene: 119946538

Following gene: 119946550

Centisome position: 79.01

GC content: 39.37

Gene sequence:

>1143_bases
ATGAATAAAGTATCAATACTAGCATTAAGCATTAGCAGTATCTTGTTGGCATCAAATGTCAGTGCAGCCAACCAAGTTGC
TGATGCAACAGGCAATGCGATGGGCAATACAGGTGTTGCATCTGCTGGTTATTTGACGGCACCATTTTATAATCCAGCAC
TTGGGGCTGATTTCAAAGCTAACGACGACTTTGCTATTCTGATTCCCGCAATTAGCGTTTCTGCCCGTGATACAAGTGAT
AGTTTAACGACTATTGATGATTTACAAACGTCTATTGAAAAATATGAAAATTCAGGTTCGACTTCAACAGCAGAGCTTAA
TAAGATAGATGGATACCTCAATCAACTGGACGGTAATCAACCTTTTGCGGTTACGGCAGGTATTGGGCTTGCCATCGCAT
TACCAGCGAAAGCCGTTTCCTCTAACTTATTTGCTCGCGGTTATGCTGAAATCATTGCGACTACCGATATAGCAACAGAT
CTCGATATTGTAGATCGTTATACAAACTCGACTGTCTATATGCTAGCGTTTGATTATGTTGAAGTAGGTTTATCTTTAGC
TAAAGAATTTATCATTTCAGAAGAACAATTTTCTTTCGGTATAACCCCTAAATACCAAAAAATGGCCACCTATGCACAAC
GGGTCACTGTCTCTGATTTTGATATATCTAATTACAATGAAAGTGAAATCACAAAAAATGCATTCAATCTTGATTTAGGT
GCGATGTGGTATAAAGATAATTTTCGTGCAGGTTTAGCTGTTAAAGATCTGCTATCCCAAAGTATTGAAGCAAGAGGAAA
CGGGTTAAAGGATACTTATAAGTTAGACACACAAGTCACTCTTGGTCTTGCCTATGCTTCTGAGTATTTTACAGCCGCCA
TTGATGGGGATCTCACTAAACAGACTCGCTTCCAAAATCAAAATGATAATACCCAATTTGTACGCTTTGGGATAGAAGGC
AATGCATGGGACTGGGCTCAGTTACGTGCAGGATATGAGATAGATTTGCAAGATACGCTTGATAACTCAATCACAGCAGG
TATTGGCATCAGTCCATTCGACGTTGTGAGTTTAGATATAGCGGGATCTTATGCAGGAAATAATCAGTTTGGTGCTTCAG
CTAATTTGGCATTTACCCTTTAA

Upstream 100 bases:

>100_bases
AAAAGCGATTAGCATATATCCAGCTGACCATTTTTTCTACCGATTAAAGTTATGCACTTGTTATTTGCATCTCAACAAAA
CTAAAAAGGAATTTTTCAAT

Downstream 100 bases:

>100_bases
TTAAACGGCCAGTCTCGTCCTAAAATAAGCTTACACATTCAGGACGAGACATGCATCTACAAAAGAACTGTCTTTGCATC
AATTTTTTTGCAGAATATTC

Product: hypothetical protein

Products: NA

Alternate protein names: Plasmid Transfer Protein TraF; TraF Protein; Conjugative Transfer Protein; Outer Membrane Or Exported; TraF-Related Protein; IncI1 Plasmid Conjugative Transfer Protein TraF; Ribonuclease PH

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MNKVSILALSISSILLASNVSAANQVADATGNAMGNTGVASAGYLTAPFYNPALGADFKANDDFAILIPAISVSARDTSD
SLTTIDDLQTSIEKYENSGSTSTAELNKIDGYLNQLDGNQPFAVTAGIGLAIALPAKAVSSNLFARGYAEIIATTDIATD
LDIVDRYTNSTVYMLAFDYVEVGLSLAKEFIISEEQFSFGITPKYQKMATYAQRVTVSDFDISNYNESEITKNAFNLDLG
AMWYKDNFRAGLAVKDLLSQSIEARGNGLKDTYKLDTQVTLGLAYASEYFTAAIDGDLTKQTRFQNQNDNTQFVRFGIEG
NAWDWAQLRAGYEIDLQDTLDNSITAGIGISPFDVVSLDIAGSYAGNNQFGASANLAFTL

Sequences:

>Translated_380_residues
MNKVSILALSISSILLASNVSAANQVADATGNAMGNTGVASAGYLTAPFYNPALGADFKANDDFAILIPAISVSARDTSD
SLTTIDDLQTSIEKYENSGSTSTAELNKIDGYLNQLDGNQPFAVTAGIGLAIALPAKAVSSNLFARGYAEIIATTDIATD
LDIVDRYTNSTVYMLAFDYVEVGLSLAKEFIISEEQFSFGITPKYQKMATYAQRVTVSDFDISNYNESEITKNAFNLDLG
AMWYKDNFRAGLAVKDLLSQSIEARGNGLKDTYKLDTQVTLGLAYASEYFTAAIDGDLTKQTRFQNQNDNTQFVRFGIEG
NAWDWAQLRAGYEIDLQDTLDNSITAGIGISPFDVVSLDIAGSYAGNNQFGASANLAFTL
>Mature_380_residues
MNKVSILALSISSILLASNVSAANQVADATGNAMGNTGVASAGYLTAPFYNPALGADFKANDDFAILIPAISVSARDTSD
SLTTIDDLQTSIEKYENSGSTSTAELNKIDGYLNQLDGNQPFAVTAGIGLAIALPAKAVSSNLFARGYAEIIATTDIATD
LDIVDRYTNSTVYMLAFDYVEVGLSLAKEFIISEEQFSFGITPKYQKMATYAQRVTVSDFDISNYNESEITKNAFNLDLG
AMWYKDNFRAGLAVKDLLSQSIEARGNGLKDTYKLDTQVTLGLAYASEYFTAAIDGDLTKQTRFQNQNDNTQFVRFGIEG
NAWDWAQLRAGYEIDLQDTLDNSITAGIGISPFDVVSLDIAGSYAGNNQFGASANLAFTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40845; Mature: 40845

Theoretical pI: Translated: 3.99; Mature: 3.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVSILALSISSILLASNVSAANQVADATGNAMGNTGVASAGYLTAPFYNPALGADFKA
CCCEEEEEEEHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
NDDFAILIPAISVSARDTSDSLTTIDDLQTSIEKYENSGSTSTAELNKIDGYLNQLDGNQ
CCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
PFAVTAGIGLAIALPAKAVSSNLFARGYAEIIATTDIATDLDIVDRYTNSTVYMLAFDYV
CEEEEECCCEEEECCHHHHHHHHHHCCHHHHEEECCCCCCHHHHHHCCCCEEEEEEHHHH
EVGLSLAKEFIISEEQFSFGITPKYQKMATYAQRVTVSDFDISNYNESEITKNAFNLDLG
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCC
AMWYKDNFRAGLAVKDLLSQSIEARGNGLKDTYKLDTQVTLGLAYASEYFTAAIDGDLTK
EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEEEEHHHHEEEEECCCCHH
QTRFQNQNDNTQFVRFGIEGNAWDWAQLRAGYEIDLQDTLDNSITAGIGISPFDVVSLDI
HHHCCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEHHHCCCCCCCCCCCCCCCEEEEEE
AGSYAGNNQFGASANLAFTL
ECCCCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MNKVSILALSISSILLASNVSAANQVADATGNAMGNTGVASAGYLTAPFYNPALGADFKA
CCCEEEEEEEHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
NDDFAILIPAISVSARDTSDSLTTIDDLQTSIEKYENSGSTSTAELNKIDGYLNQLDGNQ
CCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
PFAVTAGIGLAIALPAKAVSSNLFARGYAEIIATTDIATDLDIVDRYTNSTVYMLAFDYV
CEEEEECCCEEEECCHHHHHHHHHHCCHHHHEEECCCCCCHHHHHHCCCCEEEEEEHHHH
EVGLSLAKEFIISEEQFSFGITPKYQKMATYAQRVTVSDFDISNYNESEITKNAFNLDLG
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCC
AMWYKDNFRAGLAVKDLLSQSIEARGNGLKDTYKLDTQVTLGLAYASEYFTAAIDGDLTK
EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEEEEHHHHEEEEECCCCHH
QTRFQNQNDNTQFVRFGIEGNAWDWAQLRAGYEIDLQDTLDNSITAGIGISPFDVVSLDI
HHHCCCCCCCCEEEEEECCCCCCCHHHHCCCCEEEEHHHCCCCCCCCCCCCCCCEEEEEE
AGSYAGNNQFGASANLAFTL
ECCCCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA