| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is aglG [H]
Identifier: 119946535
GI number: 119946535
Start: 3594752
End: 3595900
Strand: Direct
Name: aglG [H]
Synonym: Ping_2912
Alternate gene names: 119946535
Gene position: 3594752-3595900 (Clockwise)
Preceding gene: 119946534
Following gene: 119946536
Centisome position: 78.84
GC content: 44.56
Gene sequence:
>1149_bases ATGAGTCTGAAACAAATGAGGCGTTCCCCTTTAATGCTGGTGGTACACCTGAGTGTGTTATTTCTGGTGCTGTTATGGAC ATTTCCCACTGCGGGATTATTGATTTCCTCTTTCCGCGATAAAGACCAACTGGCAGTGAGTGGTTGGTGGGAGGCACTGT CCTCCTCGGAGCAAAATTTAATTGGCAGAACAGATGCACCAGATCAACAAGTTTTAGTTGACGGTCAGTATATTTTAGCG GGAGAAATTGAGGATTTTAATCCTAAGGATGAAATTTTACGCTTTGGTTGGACATCTCAGGAGCCGGAAGCCTATTTGGC AGGAAGTATTGCTAAAATGCGCAATGGTAGTACCTTAACCGTTGCAGGTGATGGTCACTATAGCATGGTATCACCGATGC CTTTTACCGGCAGTCGTGGCAACCGAATATTTTACACCGCATTAGCTTCGCCTAAGTTTACCCTCGACAATTATGATGAA GTATTACACTCAGAGGGCATTGGTCAGTCATTTATTAACTCACTAACAGTCACCATACCGGCCACTATTATTCCGATTTT GATCGCAGCCTTTGCCGCCTATGCACTATCTTGGATGCGTTTACCCGGGCGGGGAATATTAATTGCTCTGGTGGTTGGTT TACTGGTTGTGCCCCTGCAGATGTCTTTGATTCCACTGTTACAACTCTACAATACAATAGGAGGATACTTCGGCGTTAGC GCAAAAAGCTATCTCGGCATTTGGCTTGCCCATACTGGATTCGGCTTACCCTTGGCTATTTATTTATTAAGAAATTACAT TTCAGGTCTCCCTAAAGAAATCATTGAATCAGCGCGTGTTGATGGTGCTAATGACTTTGATATTTTTGTTAAAATTATAC TGCCCCTGTCATTTCCGGCGCTTGCTTCCTTTGCCATTTTCCAATTTCTTTGGGTCTGGAATGATCTCTTGGTTGCGACG GTATTCCTTGGTAATGGCGAACATGAATTGGTATTAACCGGACGCTTGAGGGAGTTATTGGGATCAAGAGGAGGAAATTG GGAAATCTTAACAGCATCCGCTTTTGTCTCCATTGCGGTGCCGCTCACCGTATTTTTCACGCTGCAACGCTACCTAGTGC GCGGATTGCTGACAGGCTCAGTCAAATAA
Upstream 100 bases:
>100_bases TTATTCCGGTGATGGTTTGGAATGTTAGACAGGCAAATGCACAAATGGAAGGACGTTAATCATGCAATCAATACCAAGTA ACAAGTCTAATCGGGTCATG
Downstream 100 bases:
>100_bases TAAGAATTTAAGGACACACTATGACTAGTTCGACTGGTTTAACATTAAAAAACATTAAAAAATCCTACGGCAAAACCGAG GTATTACATGGTATTGACTT
Product: ABC transporter binding protein inner membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MSLKQMRRSPLMLVVHLSVLFLVLLWTFPTAGLLISSFRDKDQLAVSGWWEALSSSEQNLIGRTDAPDQQVLVDGQYILA GEIEDFNPKDEILRFGWTSQEPEAYLAGSIAKMRNGSTLTVAGDGHYSMVSPMPFTGSRGNRIFYTALASPKFTLDNYDE VLHSEGIGQSFINSLTVTIPATIIPILIAAFAAYALSWMRLPGRGILIALVVGLLVVPLQMSLIPLLQLYNTIGGYFGVS AKSYLGIWLAHTGFGLPLAIYLLRNYISGLPKEIIESARVDGANDFDIFVKIILPLSFPALASFAIFQFLWVWNDLLVAT VFLGNGEHELVLTGRLRELLGSRGGNWEILTASAFVSIAVPLTVFFTLQRYLVRGLLTGSVK
Sequences:
>Translated_382_residues MSLKQMRRSPLMLVVHLSVLFLVLLWTFPTAGLLISSFRDKDQLAVSGWWEALSSSEQNLIGRTDAPDQQVLVDGQYILA GEIEDFNPKDEILRFGWTSQEPEAYLAGSIAKMRNGSTLTVAGDGHYSMVSPMPFTGSRGNRIFYTALASPKFTLDNYDE VLHSEGIGQSFINSLTVTIPATIIPILIAAFAAYALSWMRLPGRGILIALVVGLLVVPLQMSLIPLLQLYNTIGGYFGVS AKSYLGIWLAHTGFGLPLAIYLLRNYISGLPKEIIESARVDGANDFDIFVKIILPLSFPALASFAIFQFLWVWNDLLVAT VFLGNGEHELVLTGRLRELLGSRGGNWEILTASAFVSIAVPLTVFFTLQRYLVRGLLTGSVK >Mature_381_residues SLKQMRRSPLMLVVHLSVLFLVLLWTFPTAGLLISSFRDKDQLAVSGWWEALSSSEQNLIGRTDAPDQQVLVDGQYILAG EIEDFNPKDEILRFGWTSQEPEAYLAGSIAKMRNGSTLTVAGDGHYSMVSPMPFTGSRGNRIFYTALASPKFTLDNYDEV LHSEGIGQSFINSLTVTIPATIIPILIAAFAAYALSWMRLPGRGILIALVVGLLVVPLQMSLIPLLQLYNTIGGYFGVSA KSYLGIWLAHTGFGLPLAIYLLRNYISGLPKEIIESARVDGANDFDIFVKIILPLSFPALASFAIFQFLWVWNDLLVATV FLGNGEHELVLTGRLRELLGSRGGNWEILTASAFVSIAVPLTVFFTLQRYLVRGLLTGSVK
Specific function: Part of the binding-protein-dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0395
COG function: function code G; ABC-type sugar transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787571, Length=251, Percent_Identity=26.2948207171315, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1790464, Length=212, Percent_Identity=29.7169811320755, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1789860, Length=222, Percent_Identity=23.8738738738739, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1787368, Length=172, Percent_Identity=26.1627906976744, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 42009; Mature: 41877
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKQMRRSPLMLVVHLSVLFLVLLWTFPTAGLLISSFRDKDQLAVSGWWEALSSSEQNL CCHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC IGRTDAPDQQVLVDGQYILAGEIEDFNPKDEILRFGWTSQEPEAYLAGSIAKMRNGSTLT CCCCCCCCCEEEECCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEE VAGDGHYSMVSPMPFTGSRGNRIFYTALASPKFTLDNYDEVLHSEGIGQSFINSLTVTIP EECCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHEEEHHH ATIIPILIAAFAAYALSWMRLPGRGILIALVVGLLVVPLQMSLIPLLQLYNTIGGYFGVS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AKSYLGIWLAHTGFGLPLAIYLLRNYISGLPKEIIESARVDGANDFDIFVKIILPLSFPA HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHH LASFAIFQFLWVWNDLLVATVFLGNGEHELVLTGRLRELLGSRGGNWEILTASAFVSIAV HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCEEEEEHHHHHHHHH PLTVFFTLQRYLVRGLLTGSVK HHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SLKQMRRSPLMLVVHLSVLFLVLLWTFPTAGLLISSFRDKDQLAVSGWWEALSSSEQNL CHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC IGRTDAPDQQVLVDGQYILAGEIEDFNPKDEILRFGWTSQEPEAYLAGSIAKMRNGSTLT CCCCCCCCCEEEECCCEEEEECCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEE VAGDGHYSMVSPMPFTGSRGNRIFYTALASPKFTLDNYDEVLHSEGIGQSFINSLTVTIP EECCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHEEEHHH ATIIPILIAAFAAYALSWMRLPGRGILIALVVGLLVVPLQMSLIPLLQLYNTIGGYFGVS HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AKSYLGIWLAHTGFGLPLAIYLLRNYISGLPKEIIESARVDGANDFDIFVKIILPLSFPA HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCHH LASFAIFQFLWVWNDLLVATVFLGNGEHELVLTGRLRELLGSRGGNWEILTASAFVSIAV HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCEEEEEHHHHHHHHH PLTVFFTLQRYLVRGLLTGSVK HHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10400573; 11481430 [H]