Click here to switch to the map view.

The map label for this gene is aglF [H]

Identifier: 119946534

GI number: 119946534

Start: 3593700

End: 3594710

Strand: Direct

Name: aglF [H]

Synonym: Ping_2911

Alternate gene names: 119946534

Gene position: 3593700-3594710 (Clockwise)

Preceding gene: 119946533

Following gene: 119946535

Centisome position: 78.82

GC content: 40.95

Gene sequence:

>1011_bases
ATGGAACAATTATATTACTCCTTACTGGTTATGCTACTGGGTGTTTTAGGTTGTGTTTTTTATTTTTTTGGTAGTAACTG
GTTGTTGATCATAATGTTCCCAATCAACCATGTTTCCAACGAAAAGATGGCAAAAAACATTCGCCGGGCAGCAGCCATCC
GGCCTTGGTTATTTTTAGGTCCCGCCTTGTTTTTTCTTGGTTTATATCTTGTTTATCCGGTCTTTGATTCAGTGTATTTG
TCATTACACGGACGCAATGGCGAAGATTTTGTTGGATTAGCTAATTATCAATGGCTATTTAACGACAATGAATTTATTGA
GAGTTTAATCAATAACGTAATGTGGTTATTGATTGTACCCGCATTATCCACATTTTTTGGTTTGATTATTGCCGCGCTCA
CGGATCGTATTCGTTGGGGAAATATTGCCAAAAGTCTTATTTTCATGCCCATGGCAATCTCTTTTATCGGTGCTTCTATT
ATCTGGAAATTTGTTTATGATTACCGCGCCGAAGGCTCTGATCAAATTGGTCTGCTTAATGCGCTAGTGGTCTATTTTGG
TGGCACACCACAAGCCTGGATAACTATCCCATTTTGGAATGATATTTTATTAATGGTGATTTTGATTTGGATCCAAACGG
GTTTTGCCATGGTGATTTTATCAGCTGCACTGCGTGGTATTCCGGAGGAAACCGTAGAAGCTGCCGTATTAGACGGGGCC
AATGGCATACAGATTTTCTTCAAAATTCTTATCCCGCAAATTTGGGGATCGATTGCCGTGGTATGGACCACTATCACTAT
TTTAGTGCTTAAAGTCTTTGATATCGTTTTAGCCATGACCAACGGTCAATGGGACACCCAAGTATTGGCCAACATGATGT
TTGACTGGATGTTTAGAGGCGGCGGTGATTTTGGCCGTGGCGCGGCGATAGCGGTGATTATCATGATTGCGGTTATTCCG
GTGATGGTTTGGAATGTTAGACAGGCAAATGCACAAATGGAAGGACGTTAA

Upstream 100 bases:

>100_bases
CATTCAAGCAACGTGGGATGCGCTTAAATAAAAGCTCCCCTCATAAGCCGGTGTATCACCGGCTTATTTTTTTATTATGA
TCCCTGTGTGAGGTTTTACA

Downstream 100 bases:

>100_bases
TCATGCAATCAATACCAAGTAACAAGTCTAATCGGGTCATGATGAGTCTGAAACAAATGAGGCGTTCCCCTTTAATGCTG
GTGGTACACCTGAGTGTGTT

Product: ABC alpha-glucoside transporter inner membrane binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MEQLYYSLLVMLLGVLGCVFYFFGSNWLLIIMFPINHVSNEKMAKNIRRAAAIRPWLFLGPALFFLGLYLVYPVFDSVYL
SLHGRNGEDFVGLANYQWLFNDNEFIESLINNVMWLLIVPALSTFFGLIIAALTDRIRWGNIAKSLIFMPMAISFIGASI
IWKFVYDYRAEGSDQIGLLNALVVYFGGTPQAWITIPFWNDILLMVILIWIQTGFAMVILSAALRGIPEETVEAAVLDGA
NGIQIFFKILIPQIWGSIAVVWTTITILVLKVFDIVLAMTNGQWDTQVLANMMFDWMFRGGGDFGRGAAIAVIIMIAVIP
VMVWNVRQANAQMEGR

Sequences:

>Translated_336_residues
MEQLYYSLLVMLLGVLGCVFYFFGSNWLLIIMFPINHVSNEKMAKNIRRAAAIRPWLFLGPALFFLGLYLVYPVFDSVYL
SLHGRNGEDFVGLANYQWLFNDNEFIESLINNVMWLLIVPALSTFFGLIIAALTDRIRWGNIAKSLIFMPMAISFIGASI
IWKFVYDYRAEGSDQIGLLNALVVYFGGTPQAWITIPFWNDILLMVILIWIQTGFAMVILSAALRGIPEETVEAAVLDGA
NGIQIFFKILIPQIWGSIAVVWTTITILVLKVFDIVLAMTNGQWDTQVLANMMFDWMFRGGGDFGRGAAIAVIIMIAVIP
VMVWNVRQANAQMEGR
>Mature_336_residues
MEQLYYSLLVMLLGVLGCVFYFFGSNWLLIIMFPINHVSNEKMAKNIRRAAAIRPWLFLGPALFFLGLYLVYPVFDSVYL
SLHGRNGEDFVGLANYQWLFNDNEFIESLINNVMWLLIVPALSTFFGLIIAALTDRIRWGNIAKSLIFMPMAISFIGASI
IWKFVYDYRAEGSDQIGLLNALVVYFGGTPQAWITIPFWNDILLMVILIWIQTGFAMVILSAALRGIPEETVEAAVLDGA
NGIQIFFKILIPQIWGSIAVVWTTITILVLKVFDIVLAMTNGQWDTQVLANMMFDWMFRGGGDFGRGAAIAVIIMIAVIP
VMVWNVRQANAQMEGR

Specific function: Part of the binding-protein-dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=290, Percent_Identity=24.8275862068966, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI1790465, Length=262, Percent_Identity=22.9007633587786, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1787570, Length=252, Percent_Identity=26.984126984127, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 37893; Mature: 37893

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLYYSLLVMLLGVLGCVFYFFGSNWLLIIMFPINHVSNEKMAKNIRRAAAIRPWLFLG
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHH
PALFFLGLYLVYPVFDSVYLSLHGRNGEDFVGLANYQWLFNDNEFIESLINNVMWLLIVP
HHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEECCEEEEECCHHHHHHHHHHHHHHHHHH
ALSTFFGLIIAALTDRIRWGNIAKSLIFMPMAISFIGASIIWKFVYDYRAEGSDQIGLLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ALVVYFGGTPQAWITIPFWNDILLMVILIWIQTGFAMVILSAALRGIPEETVEAAVLDGA
HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
NGIQIFFKILIPQIWGSIAVVWTTITILVLKVFDIVLAMTNGQWDTQVLANMMFDWMFRG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
GGDFGRGAAIAVIIMIAVIPVMVWNVRQANAQMEGR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEQLYYSLLVMLLGVLGCVFYFFGSNWLLIIMFPINHVSNEKMAKNIRRAAAIRPWLFLG
CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCHHHHHH
PALFFLGLYLVYPVFDSVYLSLHGRNGEDFVGLANYQWLFNDNEFIESLINNVMWLLIVP
HHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEECCEEEEECCHHHHHHHHHHHHHHHHHH
ALSTFFGLIIAALTDRIRWGNIAKSLIFMPMAISFIGASIIWKFVYDYRAEGSDQIGLLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ALVVYFGGTPQAWITIPFWNDILLMVILIWIQTGFAMVILSAALRGIPEETVEAAVLDGA
HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
NGIQIFFKILIPQIWGSIAVVWTTITILVLKVFDIVLAMTNGQWDTQVLANMMFDWMFRG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
GGDFGRGAAIAVIIMIAVIPVMVWNVRQANAQMEGR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10400573; 11481430 [H]