| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946529
Identifier: 119946529
GI number: 119946529
Start: 3587659
End: 3588042
Strand: Reverse
Name: 119946529
Synonym: Ping_2906
Alternate gene names: NA
Gene position: 3588042-3587659 (Counterclockwise)
Preceding gene: 119946530
Following gene: 119946528
Centisome position: 78.69
GC content: 45.05
Gene sequence:
>384_bases ATGTACTATATAGTTGAAACCAGTAAATCATTCGAACAAGCATCAGCAGATCTTGATGCAGCCGTTAAACGGCACAACTT TGGGGTGTTGTATGTCCACGACTTAGGGGAGACCCTGCGTGGTAAAGGTATTTCATTTGATGAGCAGTGCAAAGTTTTTG AGGTCTGTAATCCGGGGCAGGCTGCAAAAGTTATGTCTGTCGATATGCGCCTAAACATGGCCTTGCCATGTCGTATATCG GTTTTTACCGAGAAAGGTAAAACTAAGATTGGCCTTATTAAGCCCGAGCAAATGCTGGCGGCACTCTCAAAGGATGCAGC CTTAGTGCAAATCGCCAAAGAGGTTGAGGAAAAGACCATACAGATGGTTGACGAGGCGAAATAA
Upstream 100 bases:
>100_bases ACAAATGTAAATTAGGGTGGTTTTTATTTTCAAAAAAACAGGCTTAGAATGAAGCATTCGACCGCCTTATTATGTGTAAC CATAAAGATGGAGATGACTT
Downstream 100 bases:
>100_bases ATACCCGCAAGCACAGATTATAATAAGGTGTCGCTGCGCGGCACCTGTTCTTATTTTAACTCACCATACTGTTCCGGTAA AAATAATCCAACAAAAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MYYIVETSKSFEQASADLDAAVKRHNFGVLYVHDLGETLRGKGISFDEQCKVFEVCNPGQAAKVMSVDMRLNMALPCRIS VFTEKGKTKIGLIKPEQMLAALSKDAALVQIAKEVEEKTIQMVDEAK
Sequences:
>Translated_127_residues MYYIVETSKSFEQASADLDAAVKRHNFGVLYVHDLGETLRGKGISFDEQCKVFEVCNPGQAAKVMSVDMRLNMALPCRIS VFTEKGKTKIGLIKPEQMLAALSKDAALVQIAKEVEEKTIQMVDEAK >Mature_127_residues MYYIVETSKSFEQASADLDAAVKRHNFGVLYVHDLGETLRGKGISFDEQCKVFEVCNPGQAAKVMSVDMRLNMALPCRIS VFTEKGKTKIGLIKPEQMLAALSKDAALVQIAKEVEEKTIQMVDEAK
Specific function: Unknown
COG id: COG3439
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14086; Mature: 14086
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYIVETSKSFEQASADLDAAVKRHNFGVLYVHDLGETLRGKGISFDEQCKVFEVCNPGQ CEEEEECCCCHHHHHCHHHHHHHHCCCCEEEEECCCHHHCCCCCCCCCCCCEEEECCCCC AAKVMSVDMRLNMALPCRISVFTEKGKTKIGLIKPEQMLAALSKDAALVQIAKEVEEKTI CCEEEEEEEEECEECCEEEEEEECCCCEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHH QMVDEAK HHHHCCC >Mature Secondary Structure MYYIVETSKSFEQASADLDAAVKRHNFGVLYVHDLGETLRGKGISFDEQCKVFEVCNPGQ CEEEEECCCCHHHHHCHHHHHHHHCCCCEEEEECCCHHHCCCCCCCCCCCCEEEECCCCC AAKVMSVDMRLNMALPCRISVFTEKGKTKIGLIKPEQMLAALSKDAALVQIAKEVEEKTI CCEEEEEEEEECEECCEEEEEEECCCCEEEEEECHHHHHHHHCCCHHHHHHHHHHHHHHH QMVDEAK HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA