| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yrbK [C]
Identifier: 119946512
GI number: 119946512
Start: 3567876
End: 3568439
Strand: Direct
Name: yrbK [C]
Synonym: Ping_2889
Alternate gene names: 119946512
Gene position: 3567876-3568439 (Clockwise)
Preceding gene: 119946511
Following gene: 119946513
Centisome position: 78.25
GC content: 33.87
Gene sequence:
>564_bases ATGAATAAGCGCCAGAGTATCCCATTTGTTTTATTATTAGCCGCTTTATTGATTTGGTTATTTTTCAAACAGGAAGCTGT TTTACCTTCGTTGTCAGTCCATCACCCTAGTTATATTGCGACGGATATCAATAGTACTCATTTTAATAAAACAGGTTTTT TGGATTATAAAATATTTGCAGATAAAGCCACCAACTTTAATGAAGATGAGTTGACTAATTTTAAAAAACCTAAAGTGATT GTTTATACACATAATGACCAAACAGATACGACCACAATTTGGCAAATAACCAGCGCAGTAGGTGCTCTTTATCAACAAGA TAAACTAGTGCTTTCGAAAAATGTATTAGTCAAAAATCTCAGTTTAGATCAACTTGTACAAACGATAAAGACGGAACAAC TCACTCTTTTTCTAGATAAAAAGGAGTTAAGCAGTGACTTATTAGTCACTTTGGAAGGCCCTCAGATTCATCAGCAGGGT GTTGGCATGTGGGCTTCTCTTGTCACTGAAGAGGTCATTATAAAAGATCAAATAAAAGCGGTATACTTCAATGAAAATAA ATAA
Upstream 100 bases:
>100_bases CACCCAAATAAAAGGGGGCTATGGCGCAGTACGCGAAGTCTGTGATCTTTTTTTGCAGTGCCATAACCAACTATATATTA CCCAAGGCAAAAGTGAATAA
Downstream 100 bases:
>100_bases ATTAAGCTTAATCATCAGTACACTCCTTATCTCTTTTGCAAGTATTGCGCTGGAGTCCGACTTCACTCAGCCCATTCACG TCAGTTCTGTGAGCCAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MNKRQSIPFVLLLAALLIWLFFKQEAVLPSLSVHHPSYIATDINSTHFNKTGFLDYKIFADKATNFNEDELTNFKKPKVI VYTHNDQTDTTTIWQITSAVGALYQQDKLVLSKNVLVKNLSLDQLVQTIKTEQLTLFLDKKELSSDLLVTLEGPQIHQQG VGMWASLVTEEVIIKDQIKAVYFNENK
Sequences:
>Translated_187_residues MNKRQSIPFVLLLAALLIWLFFKQEAVLPSLSVHHPSYIATDINSTHFNKTGFLDYKIFADKATNFNEDELTNFKKPKVI VYTHNDQTDTTTIWQITSAVGALYQQDKLVLSKNVLVKNLSLDQLVQTIKTEQLTLFLDKKELSSDLLVTLEGPQIHQQG VGMWASLVTEEVIIKDQIKAVYFNENK >Mature_187_residues MNKRQSIPFVLLLAALLIWLFFKQEAVLPSLSVHHPSYIATDINSTHFNKTGFLDYKIFADKATNFNEDELTNFKKPKVI VYTHNDQTDTTTIWQITSAVGALYQQDKLVLSKNVLVKNLSLDQLVQTIKTEQLTLFLDKKELSSDLLVTLEGPQIHQQG VGMWASLVTEEVIIKDQIKAVYFNENK
Specific function: Unknown
COG id: COG3117
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21341; Mature: 21341
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKRQSIPFVLLLAALLIWLFFKQEAVLPSLSVHHPSYIATDINSTHFNKTGFLDYKIFA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEE DKATNFNEDELTNFKKPKVIVYTHNDQTDTTTIWQITSAVGALYQQDKLVLSKNVLVKNL CCCCCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECC SLDQLVQTIKTEQLTLFLDKKELSSDLLVTLEGPQIHQQGVGMWASLVTEEVIIKDQIKA CHHHHHHHHCCCEEEEEEEHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEE VYFNENK EEEECCC >Mature Secondary Structure MNKRQSIPFVLLLAALLIWLFFKQEAVLPSLSVHHPSYIATDINSTHFNKTGFLDYKIFA CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEE DKATNFNEDELTNFKKPKVIVYTHNDQTDTTTIWQITSAVGALYQQDKLVLSKNVLVKNL CCCCCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECC SLDQLVQTIKTEQLTLFLDKKELSSDLLVTLEGPQIHQQGVGMWASLVTEEVIIKDQIKA CHHHHHHHHCCCEEEEEEEHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEE VYFNENK EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA