Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is yrbK [C]

Identifier: 119946512

GI number: 119946512

Start: 3567876

End: 3568439

Strand: Direct

Name: yrbK [C]

Synonym: Ping_2889

Alternate gene names: 119946512

Gene position: 3567876-3568439 (Clockwise)

Preceding gene: 119946511

Following gene: 119946513

Centisome position: 78.25

GC content: 33.87

Gene sequence:

>564_bases
ATGAATAAGCGCCAGAGTATCCCATTTGTTTTATTATTAGCCGCTTTATTGATTTGGTTATTTTTCAAACAGGAAGCTGT
TTTACCTTCGTTGTCAGTCCATCACCCTAGTTATATTGCGACGGATATCAATAGTACTCATTTTAATAAAACAGGTTTTT
TGGATTATAAAATATTTGCAGATAAAGCCACCAACTTTAATGAAGATGAGTTGACTAATTTTAAAAAACCTAAAGTGATT
GTTTATACACATAATGACCAAACAGATACGACCACAATTTGGCAAATAACCAGCGCAGTAGGTGCTCTTTATCAACAAGA
TAAACTAGTGCTTTCGAAAAATGTATTAGTCAAAAATCTCAGTTTAGATCAACTTGTACAAACGATAAAGACGGAACAAC
TCACTCTTTTTCTAGATAAAAAGGAGTTAAGCAGTGACTTATTAGTCACTTTGGAAGGCCCTCAGATTCATCAGCAGGGT
GTTGGCATGTGGGCTTCTCTTGTCACTGAAGAGGTCATTATAAAAGATCAAATAAAAGCGGTATACTTCAATGAAAATAA
ATAA

Upstream 100 bases:

>100_bases
CACCCAAATAAAAGGGGGCTATGGCGCAGTACGCGAAGTCTGTGATCTTTTTTTGCAGTGCCATAACCAACTATATATTA
CCCAAGGCAAAAGTGAATAA

Downstream 100 bases:

>100_bases
ATTAAGCTTAATCATCAGTACACTCCTTATCTCTTTTGCAAGTATTGCGCTGGAGTCCGACTTCACTCAGCCCATTCACG
TCAGTTCTGTGAGCCAGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNKRQSIPFVLLLAALLIWLFFKQEAVLPSLSVHHPSYIATDINSTHFNKTGFLDYKIFADKATNFNEDELTNFKKPKVI
VYTHNDQTDTTTIWQITSAVGALYQQDKLVLSKNVLVKNLSLDQLVQTIKTEQLTLFLDKKELSSDLLVTLEGPQIHQQG
VGMWASLVTEEVIIKDQIKAVYFNENK

Sequences:

>Translated_187_residues
MNKRQSIPFVLLLAALLIWLFFKQEAVLPSLSVHHPSYIATDINSTHFNKTGFLDYKIFADKATNFNEDELTNFKKPKVI
VYTHNDQTDTTTIWQITSAVGALYQQDKLVLSKNVLVKNLSLDQLVQTIKTEQLTLFLDKKELSSDLLVTLEGPQIHQQG
VGMWASLVTEEVIIKDQIKAVYFNENK
>Mature_187_residues
MNKRQSIPFVLLLAALLIWLFFKQEAVLPSLSVHHPSYIATDINSTHFNKTGFLDYKIFADKATNFNEDELTNFKKPKVI
VYTHNDQTDTTTIWQITSAVGALYQQDKLVLSKNVLVKNLSLDQLVQTIKTEQLTLFLDKKELSSDLLVTLEGPQIHQQG
VGMWASLVTEEVIIKDQIKAVYFNENK

Specific function: Unknown

COG id: COG3117

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21341; Mature: 21341

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRQSIPFVLLLAALLIWLFFKQEAVLPSLSVHHPSYIATDINSTHFNKTGFLDYKIFA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEE
DKATNFNEDELTNFKKPKVIVYTHNDQTDTTTIWQITSAVGALYQQDKLVLSKNVLVKNL
CCCCCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECC
SLDQLVQTIKTEQLTLFLDKKELSSDLLVTLEGPQIHQQGVGMWASLVTEEVIIKDQIKA
CHHHHHHHHCCCEEEEEEEHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEE
VYFNENK
EEEECCC
>Mature Secondary Structure
MNKRQSIPFVLLLAALLIWLFFKQEAVLPSLSVHHPSYIATDINSTHFNKTGFLDYKIFA
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEE
DKATNFNEDELTNFKKPKVIVYTHNDQTDTTTIWQITSAVGALYQQDKLVLSKNVLVKNL
CCCCCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCEEECC
SLDQLVQTIKTEQLTLFLDKKELSSDLLVTLEGPQIHQQGVGMWASLVTEEVIIKDQIKA
CHHHHHHHHCCCEEEEEEEHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEE
VYFNENK
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA