Click here to switch to the map view.

The map label for this gene is yrbA [H]

Identifier: 119946505

GI number: 119946505

Start: 3563328

End: 3563576

Strand: Reverse

Name: yrbA [H]

Synonym: Ping_2882

Alternate gene names: 119946505

Gene position: 3563576-3563328 (Counterclockwise)

Preceding gene: 119946506

Following gene: 119946504

Centisome position: 78.16

GC content: 37.75

Gene sequence:

>249_bases
ATGAATACTGAAATAATTAAAGAAAAATTAGAACAAGCGCTAGCGCTTGATGAATGCATAGTCAAAGGCGAAAATGGCAC
TTTTCAAGTGATCGCAGTCAGTGCCATGTTTGCAGATATGAGTAGAGTGAAAAAACAGCAGGCTATTTATGATCCGTTAA
CCGAGGAGATAGCAAGTAATGCCATTCATGCTCTCAGCATTAAAGCCTTAACACCCGATGAGTGGCAAAAACAAAAGCAT
TTTATTTAA

Upstream 100 bases:

>100_bases
TCTGCTTTGAGGGTGTGTCTGATAAAATATTAATCTTAGCGGGTTTATATGGGGTGAGTTTTCTCTTCAAGTAGCGAGTT
ATACCATGAATACTGAAACA

Downstream 100 bases:

>100_bases
AAGAGATAAGGACAATTTAATGGGTCAGTTTTTAATTCAAGGTGGTTGCCAATTAAAAGGGGAGGTGACAATATCCGGTG
CCAAAAATGCTGCATTACCA

Product: BolA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MNTEIIKEKLEQALALDECIVKGENGTFQVIAVSAMFADMSRVKKQQAIYDPLTEEIASNAIHALSIKALTPDEWQKQKH
FI

Sequences:

>Translated_82_residues
MNTEIIKEKLEQALALDECIVKGENGTFQVIAVSAMFADMSRVKKQQAIYDPLTEEIASNAIHALSIKALTPDEWQKQKH
FI
>Mature_82_residues
MNTEIIKEKLEQALALDECIVKGENGTFQVIAVSAMFADMSRVKKQQAIYDPLTEEIASNAIHALSIKALTPDEWQKQKH
FI

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bolA/yrbA family [H]

Homologues:

Organism=Escherichia coli, GI87082226, Length=79, Percent_Identity=53.1645569620253, Blast_Score=84, Evalue=1e-18,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002634 [H]

Pfam domain/function: PF01722 BolA [H]

EC number: NA

Molecular weight: Translated: 9232; Mature: 9232

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTEIIKEKLEQALALDECIVKGENGTFQVIAVSAMFADMSRVKKQQAIYDPLTEEIASN
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AIHALSIKALTPDEWQKQKHFI
CHHHHEEECCCCHHHHHHCCCC
>Mature Secondary Structure
MNTEIIKEKLEQALALDECIVKGENGTFQVIAVSAMFADMSRVKKQQAIYDPLTEEIASN
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AIHALSIKALTPDEWQKQKHFI
CHHHHEEECCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]