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The map label for this gene is gcvA [C]

Identifier: 119946465

GI number: 119946465

Start: 3491265

End: 3491474

Strand: Reverse

Name: gcvA [C]

Synonym: Ping_2840

Alternate gene names: 119946465

Gene position: 3491474-3491265 (Counterclockwise)

Preceding gene: 119946467

Following gene: 119946463

Centisome position: 76.57

GC content: 42.86

Gene sequence:

>210_bases
ATGGTGGATACAGTGGGTCGCAAAAAACTCATAATGGCCAATCTCTATACCTTCAGCGTGGCGGCTAAATATTTAAGTTT
TACGAAAGCAGCAGAAGAGCTTTATTTGACTCAAGGCGCGATAAGCCAACGTATCAAACAACTTGGGTTTAAACTGTTTG
TTCGTTTAACCAGAAAGTTAGCCTTAACAGAGGAGGGGGCAGCTGAGTGA

Upstream 100 bases:

>100_bases
TGCGCTGGATTGTACTTAAGATAAGATACACTAATTTAAAAGGAAATAAATGCGCTCCACAACCCAATTATAATAGGTTA
TGGATTAGTTAATTTAATGC

Downstream 100 bases:

>100_bases
AACGGTTAATAGCGCCTTTTCCTTAAGTGAGGAGCGCCAACATGGGTGCCGCGAATATTGCCGTGCAGCATCTTAGCAAC
TAAATGGTTATATTCCTGAT

Product: transcriptional regulator of LysR family protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator Of LysR Family Protein; HTH-Type Transcriptional Regulator LysR Family; LysR Family Regulatory Protein; Transcriptional Regulator LysR

Number of amino acids: Translated: 69; Mature: 69

Protein sequence:

>69_residues
MVDTVGRKKLIMANLYTFSVAAKYLSFTKAAEELYLTQGAISQRIKQLGFKLFVRLTRKLALTEEGAAE

Sequences:

>Translated_69_residues
MVDTVGRKKLIMANLYTFSVAAKYLSFTKAAEELYLTQGAISQRIKQLGFKLFVRLTRKLALTEEGAAE
>Mature_69_residues
MVDTVGRKKLIMANLYTFSVAAKYLSFTKAAEELYLTQGAISQRIKQLGFKLFVRLTRKLALTEEGAAE

Specific function: Regulatory Protein For The Glycine Cleavage System Operon (Gcv). Mediates Activation Of Gcv By Glycine And Repression By Purines. Gcva Is Negatively Autoregulated. Bind To Three Sites Upstream Of The Gcv Promoter. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789173, Length=64, Percent_Identity=54.6875, Blast_Score=62, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7743; Mature: 7743

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDTVGRKKLIMANLYTFSVAAKYLSFTKAAEELYLTQGAISQRIKQLGFKLFVRLTRKL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTEEGAAE
HHCCCCCCC
>Mature Secondary Structure
MVDTVGRKKLIMANLYTFSVAAKYLSFTKAAEELYLTQGAISQRIKQLGFKLFVRLTRKL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALTEEGAAE
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA