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The map label for this gene is 119946463

Identifier: 119946463

GI number: 119946463

Start: 3489707

End: 3490450

Strand: Reverse

Name: 119946463

Synonym: Ping_2838

Alternate gene names: NA

Gene position: 3490450-3489707 (Counterclockwise)

Preceding gene: 119946465

Following gene: 119946462

Centisome position: 76.55

GC content: 37.37

Gene sequence:

>744_bases
GTGCGAATAGTTAGCTTGCTATTGTGTATTCTTTTTTCAACATCATTACTGGCTAATTGTCCGAAATTGTCATGGCATAA
GACCGTCACGTTAAAATACATTAATGACGGTGATACTGTGACTCTGGATAATGGTCAATTAGTTCGCTTTATCGGTATTA
ATACGCCCGAGATTGATTATTCGAATAAGCATCAATCAGAGCCTTTTGCACTGGCGGCAAAGCGTCTATTAGAAGAACAA
CTCAAAAGGGGAGACAAGTTACATTTAATTTTTGATCATACCAGATATGATAGATATGGCCGATTATTGGCCTATGTATT
TACCGACGCTGGGACGAATTTAGGCTTGCTACAGTTAAAATCCGGTCTTGCCAGACATTGGGTAATAGGAAAAAACGATT
TGTTCTGGCAATGCTTTCAGGATGCAGAGCGGCAAGCGCGCCTAACAAAAGAAGGAGTATGGGCAGACTTTAATCCTTTA
AAGGCGCAAAGTTTATCGTTTAAAGATAAAGGTTATCAATACATTCAAGGGAAAGTTACCGCGCTGCGGCAAACTAAAAA
AGGTTTGCAGTTGACTTTAGATGGTAAATTGAACGTGAATATTAATAGAAAAACATTAACCTATTTTAAAACACTGGGCA
CACAATTTAGACTACATAATAGTATTTTATTAACAGGTAATTTAAAATGGTCTCAGGGTCAGTTACAATTAAAGATTTAT
CATCCAGCGCAAATATTGCCCTGA

Upstream 100 bases:

>100_bases
CAGCCTATTTTTAATAATGCTGCCGGGGATAAATTATTTTTAATCTGTTTTACGGCTTGAATCTTGAGTGAAAGTTTAAT
AACGAGCGAGGGTTTTGTTT

Downstream 100 bases:

>100_bases
ATTAATATCGGCTTTAACTATTAACATGCTGAATGTTAAGTGTAATTACAATTTACTGAATTATTAATTTTTGGAACAAG
AGCGCTTAACTCAACCTTAA

Product: nuclease

Products: NA

Alternate protein names: Micrococcal Nuclease; Staphylococcal Nuclease Homologue; Thermonuclease; Staphylococcal Nuclease; Thermonuclease Family Protein; Staphylococcal Nuclease-Like Protein; Rmonuclease Family Protein; Nuclease Domain Protein; Staphylococcal Nuclease Homolog

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MRIVSLLLCILFSTSLLANCPKLSWHKTVTLKYINDGDTVTLDNGQLVRFIGINTPEIDYSNKHQSEPFALAAKRLLEEQ
LKRGDKLHLIFDHTRYDRYGRLLAYVFTDAGTNLGLLQLKSGLARHWVIGKNDLFWQCFQDAERQARLTKEGVWADFNPL
KAQSLSFKDKGYQYIQGKVTALRQTKKGLQLTLDGKLNVNINRKTLTYFKTLGTQFRLHNSILLTGNLKWSQGQLQLKIY
HPAQILP

Sequences:

>Translated_247_residues
MRIVSLLLCILFSTSLLANCPKLSWHKTVTLKYINDGDTVTLDNGQLVRFIGINTPEIDYSNKHQSEPFALAAKRLLEEQ
LKRGDKLHLIFDHTRYDRYGRLLAYVFTDAGTNLGLLQLKSGLARHWVIGKNDLFWQCFQDAERQARLTKEGVWADFNPL
KAQSLSFKDKGYQYIQGKVTALRQTKKGLQLTLDGKLNVNINRKTLTYFKTLGTQFRLHNSILLTGNLKWSQGQLQLKIY
HPAQILP
>Mature_247_residues
MRIVSLLLCILFSTSLLANCPKLSWHKTVTLKYINDGDTVTLDNGQLVRFIGINTPEIDYSNKHQSEPFALAAKRLLEEQ
LKRGDKLHLIFDHTRYDRYGRLLAYVFTDAGTNLGLLQLKSGLARHWVIGKNDLFWQCFQDAERQARLTKEGVWADFNPL
KAQSLSFKDKGYQYIQGKVTALRQTKKGLQLTLDGKLNVNINRKTLTYFKTLGTQFRLHNSILLTGNLKWSQGQLQLKIY
HPAQILP

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28349; Mature: 28349

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS01284 TNASE_2 ; PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVSLLLCILFSTSLLANCPKLSWHKTVTLKYINDGDTVTLDNGQLVRFIGINTPEIDY
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEECCCCEEEEEECCCCCCCC
SNKHQSEPFALAAKRLLEEQLKRGDKLHLIFDHTRYDRYGRLLAYVFTDAGTNLGLLQLK
CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHEEEEEEECCCCCEEHHHHH
SGLARHWVIGKNDLFWQCFQDAERQARLTKEGVWADFNPLKAQSLSFKDKGYQYIQGKVT
CCCHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEHHHHH
ALRQTKKGLQLTLDGKLNVNINRKTLTYFKTLGTQFRLHNSILLTGNLKWSQGQLQLKIY
HHHHHCCCCEEEECCEEEEEECHHHHHHHHHHCCEEEEECEEEEEECCEECCCEEEEEEE
HPAQILP
CCCCCCC
>Mature Secondary Structure
MRIVSLLLCILFSTSLLANCPKLSWHKTVTLKYINDGDTVTLDNGQLVRFIGINTPEIDY
CHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCEEEECCCCEEEEEECCCCCCCC
SNKHQSEPFALAAKRLLEEQLKRGDKLHLIFDHTRYDRYGRLLAYVFTDAGTNLGLLQLK
CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHEEEEEEECCCCCEEHHHHH
SGLARHWVIGKNDLFWQCFQDAERQARLTKEGVWADFNPLKAQSLSFKDKGYQYIQGKVT
CCCHHEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEHHHHH
ALRQTKKGLQLTLDGKLNVNINRKTLTYFKTLGTQFRLHNSILLTGNLKWSQGQLQLKIY
HHHHHCCCCEEEECCEEEEEECHHHHHHHHHHCCEEEEECEEEEEECCEECCCEEEEEEE
HPAQILP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA