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The map label for this gene is ynfM [H]

Identifier: 119946426

GI number: 119946426

Start: 3445530

End: 3446729

Strand: Reverse

Name: ynfM [H]

Synonym: Ping_2800

Alternate gene names: 119946426

Gene position: 3446729-3445530 (Counterclockwise)

Preceding gene: 119946428

Following gene: 119946425

Centisome position: 75.59

GC content: 40.5

Gene sequence:

>1200_bases
GTGATAAAATTACATTCCCCTTCATACAAACGCGTCACCCTTGGGCTAGGCCTAGGCTCTTTTCTGGTTTTCTGTAACCT
CTATTATTTTCAGCCATTACTGCCCTATTTTATGGACAAATTTTCGGCCTCTGAACTGCAGGTAAACTGGCTTTTTTCCA
GTACTACTTTTGCCGTCGCCTTTTCGCTTATTCCCTGGGCCATTATTTCTGAAATATATGGTCGAAGACCGGTCATGTTA
TGCAGCTTAATATTAATTCCTTTAGTTAATCTACTGATGTTTTTTAGTCAGGAGCTGTCACATTTTATCTTTCTGCGCAC
GTTATTAGGCATCGCACTGGCAGGGTTTATTGCCGTGGCAGTGGCTTATATGGCGGAAGAATTTGAGCCGCAGGCTCTCT
TGGTCGCGGTTGGCGGTTATATCAGTGCAAATTCACTCGGCGGTGTTATCGGGCGTATCTATGGCGGGGTAATGACTGAT
TTTGTCGGCTTAAAGTGGACCATCTTTAGTATGTCTATTTTGAGTCTAATTATTTTATTTTTTGTTGTTTCCTTAATCAG
TAAACAAAAACATTTCAAACCGCAAAAAGCCCGTCTTTATTATCACAACAGACTGTTATTTGATCATATTAGAAATCCTG
CTATTTTTCTTGTGATGATCATTGGTGGTCTCAATTTTGCAGTCTTTATTAACGTCTATAGCGTGATGGGATTTAAATTA
TCCGCAGCGCCATTATCATTACCTGCCAGTATCACATCGTTAATATTCTTATGTTATTTGATGGGCACTGTTTCGGCAAA
ACTAAGCGGACGTTGGATAAAGCGTTATTCTGCTATTTCCGGTATTTTGTGTGGCTTAGGAGTGAGTTTTTGCGGCTTAG
TGATTATGTTTCTGCCGAATATTGCCGCCATTGTAGTCGGCTTATTATTATTAAGTGGCGGTGCATTTTTTATCCACTCT
CTCGCTTATGGTTACATAGGGAGAAACGTGACACAGGGTAAATCAACAGCAACCGCTTTATATCTTGTTTTGTATTATGT
AGGAGGCAGTATTGGCGGTTTTGTGCTGATATATTGCTGGCAGCTAGGTGGTTGGCCAGTGGTGTTTGCAGCATGTGCCT
TTATTTACCTGTTAATTATATATTGCGCCTTAACTGTTCAAAAAATAATTATTCCGGTTGCAGCCCCAATGCCGTTATAG

Upstream 100 bases:

>100_bases
TTAGCATAACTTTAATATATGGCAACTATGAGTTTAATATATTTTTAATATTAGCATTTAATGGCTAATCTAGGTAAAAA
TAAATTACCGAGTAGATAAA

Downstream 100 bases:

>100_bases
CAATCGAATAATAGTTAATCAAATATAACATCGTTGTTTAATTGTTAGACCTCAGTTATGGTTCAGTCAACCGCCCAATA
TTTTTTGTCTATTTTTAAGG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MIKLHSPSYKRVTLGLGLGSFLVFCNLYYFQPLLPYFMDKFSASELQVNWLFSSTTFAVAFSLIPWAIISEIYGRRPVML
CSLILIPLVNLLMFFSQELSHFIFLRTLLGIALAGFIAVAVAYMAEEFEPQALLVAVGGYISANSLGGVIGRIYGGVMTD
FVGLKWTIFSMSILSLIILFFVVSLISKQKHFKPQKARLYYHNRLLFDHIRNPAIFLVMIIGGLNFAVFINVYSVMGFKL
SAAPLSLPASITSLIFLCYLMGTVSAKLSGRWIKRYSAISGILCGLGVSFCGLVIMFLPNIAAIVVGLLLLSGGAFFIHS
LAYGYIGRNVTQGKSTATALYLVLYYVGGSIGGFVLIYCWQLGGWPVVFAACAFIYLLIIYCALTVQKIIIPVAAPMPL

Sequences:

>Translated_399_residues
MIKLHSPSYKRVTLGLGLGSFLVFCNLYYFQPLLPYFMDKFSASELQVNWLFSSTTFAVAFSLIPWAIISEIYGRRPVML
CSLILIPLVNLLMFFSQELSHFIFLRTLLGIALAGFIAVAVAYMAEEFEPQALLVAVGGYISANSLGGVIGRIYGGVMTD
FVGLKWTIFSMSILSLIILFFVVSLISKQKHFKPQKARLYYHNRLLFDHIRNPAIFLVMIIGGLNFAVFINVYSVMGFKL
SAAPLSLPASITSLIFLCYLMGTVSAKLSGRWIKRYSAISGILCGLGVSFCGLVIMFLPNIAAIVVGLLLLSGGAFFIHS
LAYGYIGRNVTQGKSTATALYLVLYYVGGSIGGFVLIYCWQLGGWPVVFAACAFIYLLIIYCALTVQKIIIPVAAPMPL
>Mature_399_residues
MIKLHSPSYKRVTLGLGLGSFLVFCNLYYFQPLLPYFMDKFSASELQVNWLFSSTTFAVAFSLIPWAIISEIYGRRPVML
CSLILIPLVNLLMFFSQELSHFIFLRTLLGIALAGFIAVAVAYMAEEFEPQALLVAVGGYISANSLGGVIGRIYGGVMTD
FVGLKWTIFSMSILSLIILFFVVSLISKQKHFKPQKARLYYHNRLLFDHIRNPAIFLVMIIGGLNFAVFINVYSVMGFKL
SAAPLSLPASITSLIFLCYLMGTVSAKLSGRWIKRYSAISGILCGLGVSFCGLVIMFLPNIAAIVVGLLLLSGGAFFIHS
LAYGYIGRNVTQGKSTATALYLVLYYVGGSIGGFVLIYCWQLGGWPVVFAACAFIYLLIIYCALTVQKIIIPVAAPMPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=391, Percent_Identity=30.690537084399, Blast_Score=172, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43878; Mature: 43878

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLHSPSYKRVTLGLGLGSFLVFCNLYYFQPLLPYFMDKFSASELQVNWLFSSTTFAVA
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHH
FSLIPWAIISEIYGRRPVMLCSLILIPLVNLLMFFSQELSHFIFLRTLLGIALAGFIAVA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAYMAEEFEPQALLVAVGGYISANSLGGVIGRIYGGVMTDFVGLKWTIFSMSILSLIILF
HHHHHHHCCCCEEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVVSLISKQKHFKPQKARLYYHNRLLFDHIRNPAIFLVMIIGGLNFAVFINVYSVMGFKL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCEE
SAAPLSLPASITSLIFLCYLMGTVSAKLSGRWIKRYSAISGILCGLGVSFCGLVIMFLPN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAIVVGLLLLSGGAFFIHSLAYGYIGRNVTQGKSTATALYLVLYYVGGSIGGFVLIYCW
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
QLGGWPVVFAACAFIYLLIIYCALTVQKIIIPVAAPMPL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIKLHSPSYKRVTLGLGLGSFLVFCNLYYFQPLLPYFMDKFSASELQVNWLFSSTTFAVA
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHH
FSLIPWAIISEIYGRRPVMLCSLILIPLVNLLMFFSQELSHFIFLRTLLGIALAGFIAVA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAYMAEEFEPQALLVAVGGYISANSLGGVIGRIYGGVMTDFVGLKWTIFSMSILSLIILF
HHHHHHHCCCCEEEEEECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVVSLISKQKHFKPQKARLYYHNRLLFDHIRNPAIFLVMIIGGLNFAVFINVYSVMGFKL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCEE
SAAPLSLPASITSLIFLCYLMGTVSAKLSGRWIKRYSAISGILCGLGVSFCGLVIMFLPN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAAIVVGLLLLSGGAFFIHSLAYGYIGRNVTQGKSTATALYLVLYYVGGSIGGFVLIYCW
HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
QLGGWPVVFAACAFIYLLIIYCALTVQKIIIPVAAPMPL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]