| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is hflK [H]
Identifier: 119946424
GI number: 119946424
Start: 3443532
End: 3444605
Strand: Reverse
Name: hflK [H]
Synonym: Ping_2798
Alternate gene names: 119946424
Gene position: 3444605-3443532 (Counterclockwise)
Preceding gene: 119946425
Following gene: 119946423
Centisome position: 75.55
GC content: 44.04
Gene sequence:
>1074_bases ATGTCGACAGAAAATGAGCAGGACCCCCGAACTCCTTGGGATAATAATCAAGGTTTTCCTCCGGAATATGGTTTATTAAT GAAGAGAGGATATTCGCACTATAAAAGAAGGCTTCTGGGTAGACACTCAAGGGGAGCTGGCCGGTATGTTTTTTATATTT TGTTTTTATTGCTGGCTGGAATAAGCCTCTGGTCCGCTATTTACACTATTCCCAGTGATTCTGTTGCGGTTGTACAGCGA TTTGGAAAATATTTAAAAGAAGTGCCTGCCGGACTGCATATTAAAATGCCACTTGGTATTGACCGTGCCACTATTGTTCC GGTTAAAAGACAATTAAAGCAAGAGTTTGGTTTTACCACACCGGATGCGACGGATCCTTATCAAAGTTCCGGTGTGAGAG CGAGCGAACAGGAAACACAAATGGTCACCGGTGATTTAAATGCCGCCCTTGTGGAGTGGGTAGTTCAGTATCGTATTGCC GATCCGGTTAAATTCTTATTTAAAGTGCGCCAGCCCAGTGAAACCCTGCGCTCAGTTTCAGAATCAGTGATGCGTGAAGT GGTGGGGGATCGTACCGTTGATGAAGTGATCACTATTGGCCGTCAGGAGATTGAGTATGAAGCATTGACCAAAATGCAGG CGCTTTCCAGTAAATATGAAATGGGGATCAGTATTGATCAGGTACAGCTAAAAAATATTAACCCGCCAAAGCCAGTTCAG GCATCTTTTAACGAAGTAAACCAAGCGCAGCAGGAAAAAGAAAAGCTAATTAATGAAGCTCGGCGTGACTACAATAAAGT TATTCCATTAGCGCTGGGTGAAAAAGATCAACGTATTCGTGAGGCTGATGGTTACCGGCTTAAACGCATTAACGAGGCTG AAGGTGATGTTGCGCGATTTAATGCACTGTTCGCTGAATACCTTAAGGCGCCTGAAGTCACAAAGAGACGTATCTATCTT GAGACAATGCAGGCGGTGTTACCACAGATACGCTCCAAAATAATTATCGATTCAAACAGCCCGAGTATTTTGCCATGGTT AGATCTTAATGCGGCCCAGGGAGAAAAGCCATGA
Upstream 100 bases:
>100_bases TTGATCAATAGAGTACTTTTAATCCTCACTTCTTGACAATCTTAGTGATCATTCCATAGTCAATATAGGGCATACTTTTG TGCCGTTAATAGGGGTTATT
Downstream 100 bases:
>100_bases AGAACATAACAACAGGATTTGCATTATTATTGATAGCACTGGTGGTTATGACATTAAAATCGACGCTTTACACTGTGGGT GAAGTTGAGCAGGTTATTAT
Product: HflK protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MSTENEQDPRTPWDNNQGFPPEYGLLMKRGYSHYKRRLLGRHSRGAGRYVFYILFLLLAGISLWSAIYTIPSDSVAVVQR FGKYLKEVPAGLHIKMPLGIDRATIVPVKRQLKQEFGFTTPDATDPYQSSGVRASEQETQMVTGDLNAALVEWVVQYRIA DPVKFLFKVRQPSETLRSVSESVMREVVGDRTVDEVITIGRQEIEYEALTKMQALSSKYEMGISIDQVQLKNINPPKPVQ ASFNEVNQAQQEKEKLINEARRDYNKVIPLALGEKDQRIREADGYRLKRINEAEGDVARFNALFAEYLKAPEVTKRRIYL ETMQAVLPQIRSKIIIDSNSPSILPWLDLNAAQGEKP
Sequences:
>Translated_357_residues MSTENEQDPRTPWDNNQGFPPEYGLLMKRGYSHYKRRLLGRHSRGAGRYVFYILFLLLAGISLWSAIYTIPSDSVAVVQR FGKYLKEVPAGLHIKMPLGIDRATIVPVKRQLKQEFGFTTPDATDPYQSSGVRASEQETQMVTGDLNAALVEWVVQYRIA DPVKFLFKVRQPSETLRSVSESVMREVVGDRTVDEVITIGRQEIEYEALTKMQALSSKYEMGISIDQVQLKNINPPKPVQ ASFNEVNQAQQEKEKLINEARRDYNKVIPLALGEKDQRIREADGYRLKRINEAEGDVARFNALFAEYLKAPEVTKRRIYL ETMQAVLPQIRSKIIIDSNSPSILPWLDLNAAQGEKP >Mature_356_residues STENEQDPRTPWDNNQGFPPEYGLLMKRGYSHYKRRLLGRHSRGAGRYVFYILFLLLAGISLWSAIYTIPSDSVAVVQRF GKYLKEVPAGLHIKMPLGIDRATIVPVKRQLKQEFGFTTPDATDPYQSSGVRASEQETQMVTGDLNAALVEWVVQYRIAD PVKFLFKVRQPSETLRSVSESVMREVVGDRTVDEVITIGRQEIEYEALTKMQALSSKYEMGISIDQVQLKNINPPKPVQA SFNEVNQAQQEKEKLINEARRDYNKVIPLALGEKDQRIREADGYRLKRINEAEGDVARFNALFAEYLKAPEVTKRRIYLE TMQAVLPQIRSKIIIDSNSPSILPWLDLNAAQGEKP
Specific function: HflC and HflK could encode or regulate a protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=293, Percent_Identity=34.1296928327645, Blast_Score=155, Evalue=4e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 40677; Mature: 40546
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTENEQDPRTPWDNNQGFPPEYGLLMKRGYSHYKRRLLGRHSRGAGRYVFYILFLLLAG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ISLWSAIYTIPSDSVAVVQRFGKYLKEVPAGLHIKMPLGIDRATIVPVKRQLKQEFGFTT HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC PDATDPYQSSGVRASEQETQMVTGDLNAALVEWVVQYRIADPVKFLFKVRQPSETLRSVS CCCCCCCHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ESVMREVVGDRTVDEVITIGRQEIEYEALTKMQALSSKYEMGISIDQVQLKNINPPKPVQ HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCH ASFNEVNQAQQEKEKLINEARRDYNKVIPLALGEKDQRIREADGYRLKRINEAEGDVARF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHCCCCCCCHHHHH NALFAEYLKAPEVTKRRIYLETMQAVLPQIRSKIIIDSNSPSILPWLDLNAAQGEKP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCCCCC >Mature Secondary Structure STENEQDPRTPWDNNQGFPPEYGLLMKRGYSHYKRRLLGRHSRGAGRYVFYILFLLLAG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH ISLWSAIYTIPSDSVAVVQRFGKYLKEVPAGLHIKMPLGIDRATIVPVKRQLKQEFGFTT HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC PDATDPYQSSGVRASEQETQMVTGDLNAALVEWVVQYRIADPVKFLFKVRQPSETLRSVS CCCCCCCHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ESVMREVVGDRTVDEVITIGRQEIEYEALTKMQALSSKYEMGISIDQVQLKNINPPKPVQ HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCH ASFNEVNQAQQEKEKLINEARRDYNKVIPLALGEKDQRIREADGYRLKRINEAEGDVARF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHCCCCCCCHHHHH NALFAEYLKAPEVTKRRIYLETMQAVLPQIRSKIIIDSNSPSILPWLDLNAAQGEKP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]