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The map label for this gene is vdlD [H]

Identifier: 119946392

GI number: 119946392

Start: 3402676

End: 3403152

Strand: Direct

Name: vdlD [H]

Synonym: Ping_2766

Alternate gene names: 119946392

Gene position: 3402676-3403152 (Clockwise)

Preceding gene: 119946386

Following gene: 119946393

Centisome position: 74.63

GC content: 43.82

Gene sequence:

>477_bases
ATGAAAAAGCCCCAAAGAGACATCACCCTACGTTTTTTAGCTGAACCTCAAGATGTTAATTTTGGTGGAAAGGTACATGG
TGGAGCAGTAATGAGATGGATCGATTTAGCGGCATATGCTTGTGCCGCGGGCTGGAGCGGTCATTATTGTGTTACTGCCT
ATGCTGGCGGGATCAGATTTGTCACACCTATTCATGTCGGTAGCCTGGTTGAGGTGGAGGCGAAAGTGATTTATACGGGA
AAATCCTCGATGCATATTGCCCTTGAAGTAAATGCTTGTGATCCAAAATCGTTAAACAGACGTTTGACGACACATTGCAT
CGTCATTATGGTGGCGGTCGATGCACATAGCCATCCGATTTATGTTCCAGCATGGGTGCCGGAAAGCGAAGAGGATATAC
AACAGAATGAAACTGCCCGTAAACTGATGGAAATGCGTAAAAAAATTGGTGAAGAAATGCAAATATTTGTTGAATAA

Upstream 100 bases:

>100_bases
TAGTGTTAATTTTTCCTACGCGATGCAAGATCACATCTTTAATACATTTGATATAACTATTATTTTTAAGAATTGATTAA
AAAATTCAGAGGATAAGTGA

Downstream 100 bases:

>100_bases
CAAAATCTTTATCAACTTCACAATTAATTGTACATATTATGAAGTTTGATATTTCCATCACCAAAATAGTCCTATTTTGG
TGATGGAAATCATCTCAATT

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MKKPQRDITLRFLAEPQDVNFGGKVHGGAVMRWIDLAAYACAAGWSGHYCVTAYAGGIRFVTPIHVGSLVEVEAKVIYTG
KSSMHIALEVNACDPKSLNRRLTTHCIVIMVAVDAHSHPIYVPAWVPESEEDIQQNETARKLMEMRKKIGEEMQIFVE

Sequences:

>Translated_158_residues
MKKPQRDITLRFLAEPQDVNFGGKVHGGAVMRWIDLAAYACAAGWSGHYCVTAYAGGIRFVTPIHVGSLVEVEAKVIYTG
KSSMHIALEVNACDPKSLNRRLTTHCIVIMVAVDAHSHPIYVPAWVPESEEDIQQNETARKLMEMRKKIGEEMQIFVE
>Mature_158_residues
MKKPQRDITLRFLAEPQDVNFGGKVHGGAVMRWIDLAAYACAAGWSGHYCVTAYAGGIRFVTPIHVGSLVEVEAKVIYTG
KSSMHIALEVNACDPKSLNRRLTTHCIVIMVAVDAHSHPIYVPAWVPESEEDIQQNETARKLMEMRKKIGEEMQIFVE

Specific function: Unknown

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 17624; Mature: 17624

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPQRDITLRFLAEPQDVNFGGKVHGGAVMRWIDLAAYACAAGWSGHYCVTAYAGGIRF
CCCCCCCEEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEE
VTPIHVGSLVEVEAKVIYTGKSSMHIALEVNACDPKSLNRRLTTHCIVIMVAVDAHSHPI
EEEECCCCEEEEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHEEEEEEEEECCCCCCE
YVPAWVPESEEDIQQNETARKLMEMRKKIGEEMQIFVE
EEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MKKPQRDITLRFLAEPQDVNFGGKVHGGAVMRWIDLAAYACAAGWSGHYCVTAYAGGIRF
CCCCCCCEEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEE
VTPIHVGSLVEVEAKVIYTGKSSMHIALEVNACDPKSLNRRLTTHCIVIMVAVDAHSHPI
EEEECCCCEEEEEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHEEEEEEEEECCCCCCE
YVPAWVPESEEDIQQNETARKLMEMRKKIGEEMQIFVE
EEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]