| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946382
Identifier: 119946382
GI number: 119946382
Start: 3381379
End: 3382173
Strand: Reverse
Name: 119946382
Synonym: Ping_2756
Alternate gene names: NA
Gene position: 3382173-3381379 (Counterclockwise)
Preceding gene: 119946383
Following gene: 119946380
Centisome position: 74.18
GC content: 34.47
Gene sequence:
>795_bases ATGATTAAAAATTTAATAGCAGTGTTAATCGTTGTAATGGTATCTGGATGTACCACATTGCAAAAAGAGCTGAAAAATTA TGTAAAACAACCTGAGGTAAGTTACAAATCGATTTCAATTGGTAAGGTCTCGACGAGTGTTATTGAGTTAAATCCTACTT TTAATATTGCCAATAACAATAATTTTTCTATCCCCATTGACGCTGTTACTTACGATCTTTCATTTAATAATAAAAAAATG TTATCGGGAGAGAAAAAGTCGATAGGGTTGCTACCAGCAAATAACGGCAAAGATATCACTCTGTCCTTGGATTTGACTGA ACAAACATTAACGTCATTGCAGCAACTGCTGTTTAAAGATAAAAAACTGGATTATCAGGTTAAAGGCGGTGTAAAAACCA TGGGCTTAACTATTCCTTTTGAAAAATCTGCCACCTTATATGTACCGGAAATCAGCATTAAAGAGGTCAAAATGGTGAAG GGGAGTTTCACTCAGTTAGATATTCTATTGAGTGTTGATCTTAATAACCCTAATGAGTTTGTTTTACCTTTAGGGTTGCT CAATTATACGGTATCAAGCAGTGGTAAGACTTTATTTAAAGGGGATCTTAAAAATAATAAAATAAGCACAGGTAAAAATA ATATCCAGCTACCTTTAACTATTAAGCCCGGTGATTTATTTAGCACTGTGTTTGGTTTACTGAGTAATCCCACGCTCCCT CTGCATTTTGAAATAAGCAGCCCAATGTTTAAAAAATCCCATGACCAATCACTGGATCTGAGTAGCTTCTTTTAG
Upstream 100 bases:
>100_bases GGTAGGAATAATAAACAGGACGCGCCAGCTAAATTTTCAGTAACAGTTGATAAAAATATCGGTAGTTGTAATAGTGACGC ATTAATTAACAGGAGTGATT
Downstream 100 bases:
>100_bases CTGAACAATATTCACAAACAAAATCCATATAAAATATTTACCAAAAACTAAAAAAAGGGCGCGCTGTCCCTTTTTAGTTT TCGAACCGCAAAAATGTTAA
Product: water stress/hypersensitive response protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MIKNLIAVLIVVMVSGCTTLQKELKNYVKQPEVSYKSISIGKVSTSVIELNPTFNIANNNNFSIPIDAVTYDLSFNNKKM LSGEKKSIGLLPANNGKDITLSLDLTEQTLTSLQQLLFKDKKLDYQVKGGVKTMGLTIPFEKSATLYVPEISIKEVKMVK GSFTQLDILLSVDLNNPNEFVLPLGLLNYTVSSSGKTLFKGDLKNNKISTGKNNIQLPLTIKPGDLFSTVFGLLSNPTLP LHFEISSPMFKKSHDQSLDLSSFF
Sequences:
>Translated_264_residues MIKNLIAVLIVVMVSGCTTLQKELKNYVKQPEVSYKSISIGKVSTSVIELNPTFNIANNNNFSIPIDAVTYDLSFNNKKM LSGEKKSIGLLPANNGKDITLSLDLTEQTLTSLQQLLFKDKKLDYQVKGGVKTMGLTIPFEKSATLYVPEISIKEVKMVK GSFTQLDILLSVDLNNPNEFVLPLGLLNYTVSSSGKTLFKGDLKNNKISTGKNNIQLPLTIKPGDLFSTVFGLLSNPTLP LHFEISSPMFKKSHDQSLDLSSFF >Mature_264_residues MIKNLIAVLIVVMVSGCTTLQKELKNYVKQPEVSYKSISIGKVSTSVIELNPTFNIANNNNFSIPIDAVTYDLSFNNKKM LSGEKKSIGLLPANNGKDITLSLDLTEQTLTSLQQLLFKDKKLDYQVKGGVKTMGLTIPFEKSATLYVPEISIKEVKMVK GSFTQLDILLSVDLNNPNEFVLPLGLLNYTVSSSGKTLFKGDLKNNKISTGKNNIQLPLTIKPGDLFSTVFGLLSNPTLP LHFEISSPMFKKSHDQSLDLSSFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29100; Mature: 29100
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNLIAVLIVVMVSGCTTLQKELKNYVKQPEVSYKSISIGKVSTSVIELNPTFNIANNN CHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECEEEEEEEEECCCEEECCCC NFSIPIDAVTYDLSFNNKKMLSGEKKSIGLLPANNGKDITLSLDLTEQTLTSLQQLLFKD CEEEEEEEEEEEEECCCCEECCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHC KKLDYQVKGGVKTMGLTIPFEKSATLYVPEISIKEVKMVKGSFTQLDILLSVDLNNPNEF CCCCEEECCCEEEEEEEEECCCCCEEEECCCCHHHEEEECCCCEEEEEEEEEECCCCCCE VLPLGLLNYTVSSSGKTLFKGDLKNNKISTGKNNIQLPLTIKPGDLFSTVFGLLSNPTLP EEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCEE LHFEISSPMFKKSHDQSLDLSSFF EEEEECCCHHHCCCCCCCCHHHCC >Mature Secondary Structure MIKNLIAVLIVVMVSGCTTLQKELKNYVKQPEVSYKSISIGKVSTSVIELNPTFNIANNN CHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECEEEEEEEEECCCEEECCCC NFSIPIDAVTYDLSFNNKKMLSGEKKSIGLLPANNGKDITLSLDLTEQTLTSLQQLLFKD CEEEEEEEEEEEEECCCCEECCCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHC KKLDYQVKGGVKTMGLTIPFEKSATLYVPEISIKEVKMVKGSFTQLDILLSVDLNNPNEF CCCCEEECCCEEEEEEEEECCCCCEEEECCCCHHHEEEECCCCEEEEEEEEEECCCCCCE VLPLGLLNYTVSSSGKTLFKGDLKNNKISTGKNNIQLPLTIKPGDLFSTVFGLLSNPTLP EEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCEE LHFEISSPMFKKSHDQSLDLSSFF EEEEECCCHHHCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA