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The map label for this gene is ycgB [H]

Identifier: 119946335

GI number: 119946335

Start: 3320594

End: 3322117

Strand: Direct

Name: ycgB [H]

Synonym: Ping_2706

Alternate gene names: 119946335

Gene position: 3320594-3322117 (Clockwise)

Preceding gene: 119946334

Following gene: 119946347

Centisome position: 72.83

GC content: 40.49

Gene sequence:

>1524_bases
ATGAAACAGAAACCGATTTCGACCACATCCGAATGGACCTTCGAACTGATTGAAGCCTATGACAGTGAAATAGGTAAAAT
AGCAGCTGAGTTTGGTCTGGATACTTACCCGAATCAAATTGAGGTTATCAGCTCTGAACAAATGATGGATGCCTACGCTT
CAACAGGGATGCCCTTAGGTTACCACCATTGGTCCTACGGGAAGCAGTTCATCAGTACAGAACGTTCATACCAACGCGGA
CATATGGGGCTGGCTTATGAAATAGTCATTAATTCAAATCCTTGTATTGCCTACCTGATGGAAGAAAATACCATGACCAT
GCAGGCACTGGTGATTGCCCATGCCTGTTACGGACACAACTCTTTTTTCAAAGGTAATTATTTATTTAAAACTTGGACAG
ATGCAGACTCTATTATCGACTATCTTCTTTTTGCTAAAAAATACATTACTAAATGTGAAGAAAAGCATGGTATTAGTGCA
GTAGAAAGTATTATTGATTCTTGCCACGCGATTATGAATTATGGCGTTGATCGTTATAAACGCCCTCACCCGATATCGGC
TGAAAAGGAGCATAATCGTCAGCAAAAGCGGGAAGAGAACCGGCAAAATCTGGTCAATGATTTATGGCGAACCATACCCC
AGGGAAAAACAAAAAATATCAAAAGCAGCAAGCACTTTCCCGAAGAGCCAGAAGAAAACTTACTTTATTTTATCGAAAAA
AATGCGCCTTTATTAAAATCATGGCAGAGAGAAGTGGTGCGTATAGTGCGAAAAATATCTCAATATTTTCACCCGCAACG
TCAAACGCAAGTCATGAATGAAGGTTGGGCGTGTTTTTGGCACTACACGCTAGTCAATGAAATGTACAATCGGGGATTGG
TGACTGAAGGTTTTATATTGGAATTTTTACAATCACATACCAGCGTCATTTATCAGCCTCCTTTTGATAGCCAATATTAT
AATGGGATTAATCCTTATACCCTTGGCTTTAGTATGATGACAGATATCCGCCGTATCTGTGAACATCCCAGTGATGAAGA
TAAACGATGGTTTCCCGATCTTGCCGGCAGTGACTGGAAAAAAAGTTTGGATCAAGCAATGCGAAATTTTAAGGATGAAA
GTTTTATTCTGCAGTATTTATCACCCAAAGTAATCCGTGATTTAAAACTGTTTTGTATTGTTGATGATGACAAAAACCCC
TACATTGAAGTCAGCGCAATTCATGATGATGATGGCTATCACCGTATTCGGGAATCACTTGCGGGTCTCTATAATTTGGG
TGATCAGGAGCCTGATATACAAGTTTACAGTGTTGATCTTGAAGGTGACCGCTCACTAACCCTGAACCACAACCAGTATG
ACCGTAAACCATTGGCAGATTCAACGACAGAGGTGTTAAAGCATATTCATCGTTTATGGGGGTTTGATATCCATTTACAT
TCAATAGAAAATAAAGAGGTGACTAAAAGCTATCACTGTCCGCCTGTCGGTGTTGCTGAAGCTCACCCGGCTAAAGCAAG
GTGA

Upstream 100 bases:

>100_bases
AAGTGAAAGCTAATTTTCCTGATACCTTTGCCATGGAACAGGTGGTTGATGCGGCTGAAATCTATACTGTATTTCGCGAA
ATATTTCACAAGCAGGTAAT

Downstream 100 bases:

>100_bases
TGCTTGTGGTTATCAGTTTATGCTTCGAGTTTCGAGCTCAATTGTTATCAGTAGGGTGCATTCCATGCACCGCAAGCAGC
AGAAATCGGTGTGCGGAGCG

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MKQKPISTTSEWTFELIEAYDSEIGKIAAEFGLDTYPNQIEVISSEQMMDAYASTGMPLGYHHWSYGKQFISTERSYQRG
HMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHACYGHNSFFKGNYLFKTWTDADSIIDYLLFAKKYITKCEEKHGISA
VESIIDSCHAIMNYGVDRYKRPHPISAEKEHNRQQKREENRQNLVNDLWRTIPQGKTKNIKSSKHFPEEPEENLLYFIEK
NAPLLKSWQREVVRIVRKISQYFHPQRQTQVMNEGWACFWHYTLVNEMYNRGLVTEGFILEFLQSHTSVIYQPPFDSQYY
NGINPYTLGFSMMTDIRRICEHPSDEDKRWFPDLAGSDWKKSLDQAMRNFKDESFILQYLSPKVIRDLKLFCIVDDDKNP
YIEVSAIHDDDGYHRIRESLAGLYNLGDQEPDIQVYSVDLEGDRSLTLNHNQYDRKPLADSTTEVLKHIHRLWGFDIHLH
SIENKEVTKSYHCPPVGVAEAHPAKAR

Sequences:

>Translated_507_residues
MKQKPISTTSEWTFELIEAYDSEIGKIAAEFGLDTYPNQIEVISSEQMMDAYASTGMPLGYHHWSYGKQFISTERSYQRG
HMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHACYGHNSFFKGNYLFKTWTDADSIIDYLLFAKKYITKCEEKHGISA
VESIIDSCHAIMNYGVDRYKRPHPISAEKEHNRQQKREENRQNLVNDLWRTIPQGKTKNIKSSKHFPEEPEENLLYFIEK
NAPLLKSWQREVVRIVRKISQYFHPQRQTQVMNEGWACFWHYTLVNEMYNRGLVTEGFILEFLQSHTSVIYQPPFDSQYY
NGINPYTLGFSMMTDIRRICEHPSDEDKRWFPDLAGSDWKKSLDQAMRNFKDESFILQYLSPKVIRDLKLFCIVDDDKNP
YIEVSAIHDDDGYHRIRESLAGLYNLGDQEPDIQVYSVDLEGDRSLTLNHNQYDRKPLADSTTEVLKHIHRLWGFDIHLH
SIENKEVTKSYHCPPVGVAEAHPAKAR
>Mature_507_residues
MKQKPISTTSEWTFELIEAYDSEIGKIAAEFGLDTYPNQIEVISSEQMMDAYASTGMPLGYHHWSYGKQFISTERSYQRG
HMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHACYGHNSFFKGNYLFKTWTDADSIIDYLLFAKKYITKCEEKHGISA
VESIIDSCHAIMNYGVDRYKRPHPISAEKEHNRQQKREENRQNLVNDLWRTIPQGKTKNIKSSKHFPEEPEENLLYFIEK
NAPLLKSWQREVVRIVRKISQYFHPQRQTQVMNEGWACFWHYTLVNEMYNRGLVTEGFILEFLQSHTSVIYQPPFDSQYY
NGINPYTLGFSMMTDIRRICEHPSDEDKRWFPDLAGSDWKKSLDQAMRNFKDESFILQYLSPKVIRDLKLFCIVDDDKNP
YIEVSAIHDDDGYHRIRESLAGLYNLGDQEPDIQVYSVDLEGDRSLTLNHNQYDRKPLADSTTEVLKHIHRLWGFDIHLH
SIENKEVTKSYHCPPVGVAEAHPAKAR

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=492, Percent_Identity=62.3983739837398, Blast_Score=686, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 59204; Mature: 59204

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKPISTTSEWTFELIEAYDSEIGKIAAEFGLDTYPNQIEVISSEQMMDAYASTGMPLG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHCCCCCC
YHHWSYGKQFISTERSYQRGHMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHACYGHN
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCC
SFFKGNYLFKTWTDADSIIDYLLFAKKYITKCEEKHGISAVESIIDSCHAIMNYGVDRYK
CEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCC
RPHPISAEKEHNRQQKREENRQNLVNDLWRTIPQGKTKNIKSSKHFPEEPEENLLYFIEK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
NAPLLKSWQREVVRIVRKISQYFHPQRQTQVMNEGWACFWHYTLVNEMYNRGLVTEGFIL
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCHHHHH
EFLQSHTSVIYQPPFDSQYYNGINPYTLGFSMMTDIRRICEHPSDEDKRWFPDLAGSDWK
HHHHHCCCEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
KSLDQAMRNFKDESFILQYLSPKVIRDLKLFCIVDDDKNPYIEVSAIHDDDGYHRIRESL
HHHHHHHHCCCCHHHHHHHHCHHHHCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHH
AGLYNLGDQEPDIQVYSVDLEGDRSLTLNHNQYDRKPLADSTTEVLKHIHRLWGFDIHLH
HHHHHCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEE
SIENKEVTKSYHCPPVGVAEAHPAKAR
ECCCCHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKQKPISTTSEWTFELIEAYDSEIGKIAAEFGLDTYPNQIEVISSEQMMDAYASTGMPLG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHCCCCCC
YHHWSYGKQFISTERSYQRGHMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHACYGHN
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCC
SFFKGNYLFKTWTDADSIIDYLLFAKKYITKCEEKHGISAVESIIDSCHAIMNYGVDRYK
CEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCC
RPHPISAEKEHNRQQKREENRQNLVNDLWRTIPQGKTKNIKSSKHFPEEPEENLLYFIEK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
NAPLLKSWQREVVRIVRKISQYFHPQRQTQVMNEGWACFWHYTLVNEMYNRGLVTEGFIL
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCHHHHH
EFLQSHTSVIYQPPFDSQYYNGINPYTLGFSMMTDIRRICEHPSDEDKRWFPDLAGSDWK
HHHHHCCCEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
KSLDQAMRNFKDESFILQYLSPKVIRDLKLFCIVDDDKNPYIEVSAIHDDDGYHRIRESL
HHHHHHHHCCCCHHHHHHHHCHHHHCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHH
AGLYNLGDQEPDIQVYSVDLEGDRSLTLNHNQYDRKPLADSTTEVLKHIHRLWGFDIHLH
HHHHHCCCCCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEE
SIENKEVTKSYHCPPVGVAEAHPAKAR
ECCCCHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]