| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is yeaH [C]
Identifier: 119946334
GI number: 119946334
Start: 3319323
End: 3320597
Strand: Direct
Name: yeaH [C]
Synonym: Ping_2705
Alternate gene names: 119946334
Gene position: 3319323-3320597 (Clockwise)
Preceding gene: 119946333
Following gene: 119946335
Centisome position: 72.8
GC content: 42.27
Gene sequence:
>1275_bases ATGAGTTATATTATTGATCGCAGGTTAAATGCCAAAAAAAAGAGCACGGTTAACAGACAGCGCTTTTTGAAACGTTATCG TAAACATATCAAAAAAGCGGTGACTGATGCCATAAGCCGGCGCTCAATAACTGATCTCGAACATGGCGAGGAGATACATA TTCCCGCCGAAGATATGAAAGAGTCTTTTTTCCACCATGGTCAGGGGGGGCATGCCAAACGCGTATTACCGGGTAATCAA GATTTTATTGGTGGTGACCGTATTGAACGTCCTCCTTCCGGCGGTGCTGGGGGCAGTGGCTCGGGTGCGAGTGATAGCGG GAAAGGGGAAGATGAATTTGTTTTTCAAATAACCCAGGCAGAGTTTCTTGATTTTATGTTTGATGAACTCGCCTTGCCTA ATATGATTAAGCGCCAATTACTTGGCAGCGATGAATTTAAACTCCATCAGGCAGGTTTTAGTAATCAGGGCTCCCCCGGT CAAGTTGATGTTGTTCGATCATTAAAATCAGCACATGCACGGCGCATCGCACTCACCCTAAGTAAACGTAAAAAATTAAA GGCGCTTGAAAAACAGCTGCATTTATTAGTGGCAAAGGAGCCCGTTTTAAAAAATCAGGTTGAGATTGAACAATTACGTG AAAAAATATCAACGCTAAAATCACGCGTTAAGCGCGTCCCCTGGTTGGATGATTTTGATTTAAAATATCACTTGCGTGCT AAGGAACCCGCCCCGCAGGCTAAAGCGGTGATGTTTTGTATTATGGATGTTTCGGGCTCAATGAATCAGGCCACCAAAGA AATTGCTAAACGATTTTTTATTTTATTGTATCTGTTTATACAGCGAAATTATCAGCGTACTGAGATTGTTTTTATACGTC ACCATACCGTCGCTATGGAGGTTGATGAGCAGGAATTCTTTTATTCACGAGAAACGGGCGGCACTATTGTATCCAGTGCC TTAAAATTGATGCAGCAGATTATTGAACAGCGTTATCCGCTTGGCGACTGGAATATCTATGCAGCACAAGCATCCGATGG CGATAATTGGAATAATGACTCAGCGGTTTGTAAAGAGATATTGTGCAAGGCACTGCTGCCTAAATTACAATATTTTTCCT ATATTGAAATCACCCCTAATGCTCACCAATTGCTCTGGCATTCCTATCAGCAAGTGAAAGCTAATTTTCCTGATACCTTT GCCATGGAACAGGTGGTTGATGCGGCTGAAATCTATACTGTATTTCGCGAAATATTTCACAAGCAGGTAATATGA
Upstream 100 bases:
>100_bases ATCACAATGATTTATCTGGATTAAATTAGGGGAATGTCATGTTTTTTTATGTTGATAAAAATCCATTCCCTGCTGTCAAC TTTACTGATGGTGATTGCTT
Downstream 100 bases:
>100_bases AACAGAAACCGATTTCGACCACATCCGAATGGACCTTCGAACTGATTGAAGCCTATGACAGTGAAATAGGTAAAATAGCA GCTGAGTTTGGTCTGGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MSYIIDRRLNAKKKSTVNRQRFLKRYRKHIKKAVTDAISRRSITDLEHGEEIHIPAEDMKESFFHHGQGGHAKRVLPGNQ DFIGGDRIERPPSGGAGGSGSGASDSGKGEDEFVFQITQAEFLDFMFDELALPNMIKRQLLGSDEFKLHQAGFSNQGSPG QVDVVRSLKSAHARRIALTLSKRKKLKALEKQLHLLVAKEPVLKNQVEIEQLREKISTLKSRVKRVPWLDDFDLKYHLRA KEPAPQAKAVMFCIMDVSGSMNQATKEIAKRFFILLYLFIQRNYQRTEIVFIRHHTVAMEVDEQEFFYSRETGGTIVSSA LKLMQQIIEQRYPLGDWNIYAAQASDGDNWNNDSAVCKEILCKALLPKLQYFSYIEITPNAHQLLWHSYQQVKANFPDTF AMEQVVDAAEIYTVFREIFHKQVI
Sequences:
>Translated_424_residues MSYIIDRRLNAKKKSTVNRQRFLKRYRKHIKKAVTDAISRRSITDLEHGEEIHIPAEDMKESFFHHGQGGHAKRVLPGNQ DFIGGDRIERPPSGGAGGSGSGASDSGKGEDEFVFQITQAEFLDFMFDELALPNMIKRQLLGSDEFKLHQAGFSNQGSPG QVDVVRSLKSAHARRIALTLSKRKKLKALEKQLHLLVAKEPVLKNQVEIEQLREKISTLKSRVKRVPWLDDFDLKYHLRA KEPAPQAKAVMFCIMDVSGSMNQATKEIAKRFFILLYLFIQRNYQRTEIVFIRHHTVAMEVDEQEFFYSRETGGTIVSSA LKLMQQIIEQRYPLGDWNIYAAQASDGDNWNNDSAVCKEILCKALLPKLQYFSYIEITPNAHQLLWHSYQQVKANFPDTF AMEQVVDAAEIYTVFREIFHKQVI >Mature_423_residues SYIIDRRLNAKKKSTVNRQRFLKRYRKHIKKAVTDAISRRSITDLEHGEEIHIPAEDMKESFFHHGQGGHAKRVLPGNQD FIGGDRIERPPSGGAGGSGSGASDSGKGEDEFVFQITQAEFLDFMFDELALPNMIKRQLLGSDEFKLHQAGFSNQGSPGQ VDVVRSLKSAHARRIALTLSKRKKLKALEKQLHLLVAKEPVLKNQVEIEQLREKISTLKSRVKRVPWLDDFDLKYHLRAK EPAPQAKAVMFCIMDVSGSMNQATKEIAKRFFILLYLFIQRNYQRTEIVFIRHHTVAMEVDEQEFFYSRETGGTIVSSAL KLMQQIIEQRYPLGDWNIYAAQASDGDNWNNDSAVCKEILCKALLPKLQYFSYIEITPNAHQLLWHSYQQVKANFPDTFA MEQVVDAAEIYTVFREIFHKQVI
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family
Homologues:
Organism=Escherichia coli, GI1788084, Length=424, Percent_Identity=54.0094339622642, Blast_Score=484, Evalue=1e-138,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2705_PSYIN (A1SY50)
Other databases:
- EMBL: CP000510 - RefSeq: YP_944014.1 - STRING: A1SY50 - GeneID: 4625884 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_2705 - eggNOG: COG2718 - HOGENOM: HBG313798 - OMA: IVFIRHT - PhylomeDB: A1SY50 - ProtClustDB: PRK05325 - BioCyc: PING357804:PING_2705-MONOMER - HAMAP: MF_01232 - InterPro: IPR006698
Pfam domain/function: PF04285 DUF444
EC number: NA
Molecular weight: Translated: 48644; Mature: 48513
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYIIDRRLNAKKKSTVNRQRFLKRYRKHIKKAVTDAISRRSITDLEHGEEIHIPAEDMK CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHH ESFFHHGQGGHAKRVLPGNQDFIGGDRIERPPSGGAGGSGSGASDSGKGEDEFVFQITQA HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHH EFLDFMFDELALPNMIKRQLLGSDEFKLHQAGFSNQGSPGQVDVVRSLKSAHARRIALTL HHHHHHHHHHCCHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SKRKKLKALEKQLHLLVAKEPVLKNQVEIEQLREKISTLKSRVKRVPWLDDFDLKYHLRA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC KEPAPQAKAVMFCIMDVSGSMNQATKEIAKRFFILLYLFIQRNYQRTEIVFIRHHTVAME CCCCCHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEE VDEQEFFYSRETGGTIVSSALKLMQQIIEQRYPLGDWNIYAAQASDGDNWNNDSAVCKEI ECHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHH LCKALLPKLQYFSYIEITPNAHQLLWHSYQQVKANFPDTFAMEQVVDAAEIYTVFREIFH HHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH KQVI HCCC >Mature Secondary Structure SYIIDRRLNAKKKSTVNRQRFLKRYRKHIKKAVTDAISRRSITDLEHGEEIHIPAEDMK CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHH ESFFHHGQGGHAKRVLPGNQDFIGGDRIERPPSGGAGGSGSGASDSGKGEDEFVFQITQA HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHH EFLDFMFDELALPNMIKRQLLGSDEFKLHQAGFSNQGSPGQVDVVRSLKSAHARRIALTL HHHHHHHHHHCCHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH SKRKKLKALEKQLHLLVAKEPVLKNQVEIEQLREKISTLKSRVKRVPWLDDFDLKYHLRA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEC KEPAPQAKAVMFCIMDVSGSMNQATKEIAKRFFILLYLFIQRNYQRTEIVFIRHHTVAME CCCCCHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEE VDEQEFFYSRETGGTIVSSALKLMQQIIEQRYPLGDWNIYAAQASDGDNWNNDSAVCKEI ECHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHH LCKALLPKLQYFSYIEITPNAHQLLWHSYQQVKANFPDTFAMEQVVDAAEIYTVFREIFH HHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH KQVI HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA