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The map label for this gene is cspG [H]

Identifier: 119946327

GI number: 119946327

Start: 3310579

End: 3310791

Strand: Direct

Name: cspG [H]

Synonym: Ping_2698

Alternate gene names: 119946327

Gene position: 3310579-3310791 (Clockwise)

Preceding gene: 119946326

Following gene: 119946328

Centisome position: 72.61

GC content: 39.44

Gene sequence:

>213_bases
ATGTCTAATTCAACTACCGGTTTAGTAAAATGGTTTGACGAAGCAAAAGGTTTCGGTTTTCTTACTCAAGATAACGGCGG
AGCTGATGTATTTTGTCATTTCCGTGCAATTGCTTCTGAAGGCTTTAAAACATTGGCTGAAGGCCAAAAAGTTTCATTTG
AAGTTGAGCAAGGCCAAAAAGGTCTGCAGGCTGGAAATGTAATCGCACTATAA

Upstream 100 bases:

>100_bases
CTTAGTTTATCCCTTAGCTTCATCATCACATTCAATAATTCAGTTCTCAGTACTTCGCATTTTGGCGATATTTCTAATGA
ATTTATATAAGGGACACAAC

Downstream 100 bases:

>100_bases
TGTAGTGCAATCAAAAAGGTGATTATAGATCACCTTTAATTTAGTAAATCATAACAGCATTAAATTATCCGCTACAAAGA
TTGACCCCAATAACACCCAC

Product: cold-shock DNA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MSNSTTGLVKWFDEAKGFGFLTQDNGGADVFCHFRAIASEGFKTLAEGQKVSFEVEQGQKGLQAGNVIAL

Sequences:

>Translated_70_residues
MSNSTTGLVKWFDEAKGFGFLTQDNGGADVFCHFRAIASEGFKTLAEGQKVSFEVEQGQKGLQAGNVIAL
>Mature_69_residues
SNSTTGLVKWFDEAKGFGFLTQDNGGADVFCHFRAIASEGFKTLAEGQKVSFEVEQGQKGLQAGNVIAL

Specific function: Unknown

COG id: COG1278

COG function: function code K; Cold shock proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CSD (cold-shock) domain [H]

Homologues:

Organism=Escherichia coli, GI2367114, Length=70, Percent_Identity=61.4285714285714, Blast_Score=93, Evalue=3e-21,
Organism=Escherichia coli, GI1789979, Length=70, Percent_Identity=60, Blast_Score=91, Evalue=1e-20,
Organism=Escherichia coli, GI1786841, Length=64, Percent_Identity=64.0625, Blast_Score=89, Evalue=8e-20,
Organism=Escherichia coli, GI1787834, Length=70, Percent_Identity=58.5714285714286, Blast_Score=86, Evalue=5e-19,
Organism=Escherichia coli, GI1787839, Length=68, Percent_Identity=57.3529411764706, Blast_Score=85, Evalue=8e-19,
Organism=Escherichia coli, GI1788126, Length=64, Percent_Identity=62.5, Blast_Score=83, Evalue=3e-18,
Organism=Escherichia coli, GI1787107, Length=64, Percent_Identity=46.875, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019844
- InterPro:   IPR012156
- InterPro:   IPR011129
- InterPro:   IPR002059
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF00313 CSD [H]

EC number: NA

Molecular weight: Translated: 7485; Mature: 7354

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS00352 COLD_SHOCK

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSTTGLVKWFDEAKGFGFLTQDNGGADVFCHFRAIASEGFKTLAEGQKVSFEVEQGQK
CCCCCCHHEEECCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCEEEEEECCCCC
GLQAGNVIAL
CCCCCCEEEC
>Mature Secondary Structure 
SNSTTGLVKWFDEAKGFGFLTQDNGGADVFCHFRAIASEGFKTLAEGQKVSFEVEQGQK
CCCCCHHEEECCCCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHCCCEEEEEECCCCC
GLQAGNVIAL
CCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10483731 [H]