| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is fda [H]
Identifier: 119946313
GI number: 119946313
Start: 3285677
End: 3286576
Strand: Direct
Name: fda [H]
Synonym: Ping_2682
Alternate gene names: 119946313
Gene position: 3285677-3286576 (Clockwise)
Preceding gene: 119946311
Following gene: 119946324
Centisome position: 72.06
GC content: 36.22
Gene sequence:
>900_bases ATGAACAAAGAACAATTTGAAAAAATGCACAGTGGAAAAGGCTTTGTTGCAGCACTTGATCAAAGCGGAGGCAGTACACC CAAAGCGTTAGCAAAATATGGGTTAGGTGAAGATGCCTATAAAGATTCACAAGAGATGTTTAAATTAGTCCATGAGATGC GAGTCAGAATAATTAAAGCGCCCGCTTTTAATAGTGAAAATATTCTCGCGTCAATCTTATTTGAAGTCACTATGGATAGT AAAATTGATGGGCTTTATAGCGGAGATTATTTATGGGAGAAAAAGGGAATTATCCCACTATTAAAAGTAGATAAAGGCCT ATTGGAAAAAGAGAATGGTGTTCAGTTAATGAAAAATATCGACAACCTTCCTTCTCTATTAGATAAAGCAGTGGATAGGC ATATTTTTGGAACAAAAATGCGTTCGCTTATACTAGAAGCCAATGAAACTGGAATAGTTGAGGTTGTAAAACAGCAATTT GAAATCGCTAAAAAAATCATTGCCAGGGGATTAGTGCCCATCCTTGAGCCAGAAGTTGACATCAATGCTAACGAAAAAGA AAAATGTGAAAAGATATTGCACGACGCATTGAAAGCACAGATAGAAAAACTGTCTAAAGATGAGTTTATTATGCTAAAGC TGACCATTCCCAACAAGGCTGATTTATATTTAGACCTTACAAAATATAATTGTGTCATTAGAGTCTTAGCGCTTTCAGGT GGTTATGCCCAAGACGAGGCCAACAAATTATTGGCAAAAAACCACAACATGATAGCCAGTTTTTCTCGTGCTTTATCTCA AGGGTTGAGTGCCAATCAAAGTGACGCCAATTTTAATCAAACCATTCAAAAGTCGATTCAGAATATTTACGCCGCATCAA TTAAGAAAGAAAGTAAGTAA
Upstream 100 bases:
>100_bases AATATTATTTGGGCAATGAAAAATTCGTAAAATGAAAAGATAATGAAGTTGCAAAGCAAGCTAAGCTTAATGGCAATTAT CCTAAAAAAAGGTGAAGACG
Downstream 100 bases:
>100_bases ATAGTTAACGTAAAATAGCCGAATACAACAACTCCAATTTATGAGCAGGGGTTGTTGCATCGTTCAAGACAATGCTGCTT TATAGCCCCCATTTCCCAGA
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MNKEQFEKMHSGKGFVAALDQSGGSTPKALAKYGLGEDAYKDSQEMFKLVHEMRVRIIKAPAFNSENILASILFEVTMDS KIDGLYSGDYLWEKKGIIPLLKVDKGLLEKENGVQLMKNIDNLPSLLDKAVDRHIFGTKMRSLILEANETGIVEVVKQQF EIAKKIIARGLVPILEPEVDINANEKEKCEKILHDALKAQIEKLSKDEFIMLKLTIPNKADLYLDLTKYNCVIRVLALSG GYAQDEANKLLAKNHNMIASFSRALSQGLSANQSDANFNQTIQKSIQNIYAASIKKESK
Sequences:
>Translated_299_residues MNKEQFEKMHSGKGFVAALDQSGGSTPKALAKYGLGEDAYKDSQEMFKLVHEMRVRIIKAPAFNSENILASILFEVTMDS KIDGLYSGDYLWEKKGIIPLLKVDKGLLEKENGVQLMKNIDNLPSLLDKAVDRHIFGTKMRSLILEANETGIVEVVKQQF EIAKKIIARGLVPILEPEVDINANEKEKCEKILHDALKAQIEKLSKDEFIMLKLTIPNKADLYLDLTKYNCVIRVLALSG GYAQDEANKLLAKNHNMIASFSRALSQGLSANQSDANFNQTIQKSIQNIYAASIKKESK >Mature_299_residues MNKEQFEKMHSGKGFVAALDQSGGSTPKALAKYGLGEDAYKDSQEMFKLVHEMRVRIIKAPAFNSENILASILFEVTMDS KIDGLYSGDYLWEKKGIIPLLKVDKGLLEKENGVQLMKNIDNLPSLLDKAVDRHIFGTKMRSLILEANETGIVEVVKQQF EIAKKIIARGLVPILEPEVDINANEKEKCEKILHDALKAQIEKLSKDEFIMLKLTIPNKADLYLDLTKYNCVIRVLALSG GYAQDEANKLLAKNHNMIASFSRALSQGLSANQSDANFNQTIQKSIQNIYAASIKKESK
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 - InterPro: IPR023014 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 33404; Mature: 33404
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKEQFEKMHSGKGFVAALDQSGGSTPKALAKYGLGEDAYKDSQEMFKLVHEMRVRIIKA CCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHCC PAFNSENILASILFEVTMDSKIDGLYSGDYLWEKKGIIPLLKVDKGLLEKENGVQLMKNI CCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHCHHHHCCCCCHHHHHHH DNLPSLLDKAVDRHIFGTKMRSLILEANETGIVEVVKQQFEIAKKIIARGLVPILEPEVD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCC INANEKEKCEKILHDALKAQIEKLSKDEFIMLKLTIPNKADLYLDLTKYNCVIRVLALSG CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHCC GYAQDEANKLLAKNHNMIASFSRALSQGLSANQSDANFNQTIQKSIQNIYAASIKKESK CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKEQFEKMHSGKGFVAALDQSGGSTPKALAKYGLGEDAYKDSQEMFKLVHEMRVRIIKA CCHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHCC PAFNSENILASILFEVTMDSKIDGLYSGDYLWEKKGIIPLLKVDKGLLEKENGVQLMKNI CCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCHHHHCHHHHCCCCCHHHHHHH DNLPSLLDKAVDRHIFGTKMRSLILEANETGIVEVVKQQFEIAKKIIARGLVPILEPEVD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCC INANEKEKCEKILHDALKAQIEKLSKDEFIMLKLTIPNKADLYLDLTKYNCVIRVLALSG CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEHHHHHHHHHHHHCC GYAQDEANKLLAKNHNMIASFSRALSQGLSANQSDANFNQTIQKSIQNIYAASIKKESK CCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12235376 [H]