Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

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The map label for this gene is 119946288

Identifier: 119946288

GI number: 119946288

Start: 3256886

End: 3257767

Strand: Direct

Name: 119946288

Synonym: Ping_2655

Alternate gene names: NA

Gene position: 3256886-3257767 (Clockwise)

Preceding gene: 119946287

Following gene: 119946289

Centisome position: 71.43

GC content: 31.07

Gene sequence:

>882_bases
ATGAAAATAACGCTAAGTTTTAAACTAATACGGATGGATTGGCTTAAGTTGCTATTGATACCTCTACTTTTGAGTGTTTT
AGCTGTTTTTATAACAAATTTCTATCCTAAATACGAAGCTATGGCCACTATCTATCCTGTAGTCGACAGTGTCGGTGATT
TAAATAAATCTGCTTTAAAAAAAATGGAAAGGAACGCTCGACGTTTAATGAAATCAATGTATCGACAAAAAAAAAGCAAT
AGCATAATCGCTGTTCATGAAAAGTTCGCTCGGCTAAAAAGCATACAACTAACCAAACAGTTTATTATAAAATACGACCT
GAAAAAGTTATTATTTGAAGATAAGTGGGATACCGAAAATCAACGTTGGCGTAATTCTAAGAATAAAGGTGAGCCATCTT
TGGCAAAGGCAGCTAAAAATCTTAATAAACGTTTTAAAATAAAGTACACAAAAAAAAATAATTTAATTAATATTAAACTA
GTTTGGAAAGATCCAGTTATTGCAGCACAGATAGTAAATGATTATATTTACTTTGCTAATAGCTATATTGCCGATGAGTT
AAAGCGTATACAGCTAGATGAACTGTATAATTTGCAACGATTGATTATTGATAACCGTTATATATATATACAACAAGAGT
TAATTACACAGTACGAGGCGAAGCTGACATCAATGTATAGTTCTTTGTCTCGACAATTTAAAGTATTATCACCTGCCTAC
ATAGCAGAAGAGCCTATATTTAAGTTCAGTCCTATTTTAATTGCTTTAGTGTTTCTACTTTCTGTATTTTGCGTGTTTTT
ATTTATACTTTTAGGTAAAGAATCAAACAAAAAATCTGAAATACAGTTTCCATTATCACTTGAGGCAACAGAAACGCCTT
AA

Upstream 100 bases:

>100_bases
TTTAGATTATTCAAGTGTTAATTCTTTATCGCCTAGATGGTTGTTCCTAATCTATCCTCTACGTCCATTTTTAGCCTTTA
AACGTAAATTTTTATAAATT

Downstream 100 bases:

>100_bases
AATCATTAAAAAATAAACTATCTTAAAAGACTAAAATCAATTTAATTACCATTACTACAATTGATAACAACGTAAAACAA
GTTTTGATAAATCAATCTAT

Product: lipopolysaccharide biosynthesis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKITLSFKLIRMDWLKLLLIPLLLSVLAVFITNFYPKYEAMATIYPVVDSVGDLNKSALKKMERNARRLMKSMYRQKKSN
SIIAVHEKFARLKSIQLTKQFIIKYDLKKLLFEDKWDTENQRWRNSKNKGEPSLAKAAKNLNKRFKIKYTKKNNLINIKL
VWKDPVIAAQIVNDYIYFANSYIADELKRIQLDELYNLQRLIIDNRYIYIQQELITQYEAKLTSMYSSLSRQFKVLSPAY
IAEEPIFKFSPILIALVFLLSVFCVFLFILLGKESNKKSEIQFPLSLEATETP

Sequences:

>Translated_293_residues
MKITLSFKLIRMDWLKLLLIPLLLSVLAVFITNFYPKYEAMATIYPVVDSVGDLNKSALKKMERNARRLMKSMYRQKKSN
SIIAVHEKFARLKSIQLTKQFIIKYDLKKLLFEDKWDTENQRWRNSKNKGEPSLAKAAKNLNKRFKIKYTKKNNLINIKL
VWKDPVIAAQIVNDYIYFANSYIADELKRIQLDELYNLQRLIIDNRYIYIQQELITQYEAKLTSMYSSLSRQFKVLSPAY
IAEEPIFKFSPILIALVFLLSVFCVFLFILLGKESNKKSEIQFPLSLEATETP
>Mature_293_residues
MKITLSFKLIRMDWLKLLLIPLLLSVLAVFITNFYPKYEAMATIYPVVDSVGDLNKSALKKMERNARRLMKSMYRQKKSN
SIIAVHEKFARLKSIQLTKQFIIKYDLKKLLFEDKWDTENQRWRNSKNKGEPSLAKAAKNLNKRFKIKYTKKNNLINIKL
VWKDPVIAAQIVNDYIYFANSYIADELKRIQLDELYNLQRLIIDNRYIYIQQELITQYEAKLTSMYSSLSRQFKVLSPAY
IAEEPIFKFSPILIALVFLLSVFCVFLFILLGKESNKKSEIQFPLSLEATETP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34479; Mature: 34479

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITLSFKLIRMDWLKLLLIPLLLSVLAVFITNFYPKYEAMATIYPVVDSVGDLNKSALK
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHH
KMERNARRLMKSMYRQKKSNSIIAVHEKFARLKSIQLTKQFIIKYDLKKLLFEDKWDTEN
HHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
QRWRNSKNKGEPSLAKAAKNLNKRFKIKYTKKNNLINIKLVWKDPVIAAQIVNDYIYFAN
HHHCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHH
SYIADELKRIQLDELYNLQRLIIDNRYIYIQQELITQYEAKLTSMYSSLSRQFKVLSPAY
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IAEEPIFKFSPILIALVFLLSVFCVFLFILLGKESNKKSEIQFPLSLEATETP
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECEEECCCCCC
>Mature Secondary Structure
MKITLSFKLIRMDWLKLLLIPLLLSVLAVFITNFYPKYEAMATIYPVVDSVGDLNKSALK
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHH
KMERNARRLMKSMYRQKKSNSIIAVHEKFARLKSIQLTKQFIIKYDLKKLLFEDKWDTEN
HHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
QRWRNSKNKGEPSLAKAAKNLNKRFKIKYTKKNNLINIKLVWKDPVIAAQIVNDYIYFAN
HHHCCCCCCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHH
SYIADELKRIQLDELYNLQRLIIDNRYIYIQQELITQYEAKLTSMYSSLSRQFKVLSPAY
HHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
IAEEPIFKFSPILIALVFLLSVFCVFLFILLGKESNKKSEIQFPLSLEATETP
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA