| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119946287
Identifier: 119946287
GI number: 119946287
Start: 3255740
End: 3256882
Strand: Direct
Name: 119946287
Synonym: Ping_2654
Alternate gene names: NA
Gene position: 3255740-3256882 (Clockwise)
Preceding gene: 119946286
Following gene: 119946288
Centisome position: 71.4
GC content: 32.55
Gene sequence:
>1143_bases GTGAATTATAACAAGAATATCAGCATTGAATTACAGACAGTAGCTTGGCTTAGCCTGCCTCAATTATCTATTGATGAAGT GTATGCTACGGCTTCCTTATTAAAAAAAGTAAATTTTGATCGCTTACAAACATTAATAATTCAGCATCGCACTCATCCCT GTATATACAATAATATCCGTCAACATTTTATTGAACAAGTGCCTTCTAAATTATTATTTTATTTAAAAAATCAGTATGTT AAAAACAAAAAAAGAAACACTACACAACTAGGAATTTACGCTGAGTTAAACTATTTATTTCATGAAGAAAATATTCCAAT ACATTTTTTTAAAGGTTTATCCCTTTCTAAACTAATCTACTGTGATATTGCACTTAGAAATAATAATGATATCGACGTCC TAATTTCAAAATCTGACCTAGGCCAAGCCAATAGCATACTAAATAGTATGGGGTTCTACGCTCATGAGTTTGAGGCTTTA GATGATGAATGGCGAAATGAATATTTCAAAGTACATAAAGATATAGGTTATACCAATCAAGAAGGGCTATTAATAGAACT TCATCTCGAACTATCCATCCCTATCATCGATGAAATAAGTATTTATCAAAACAAACTCCAATATCGAGATAAGCTATTCC AAACAGATTTATCTGTTGATGAGTTGTTTTATCTCTGCTGGCACGGTTCACATACTCTATTCCATCGTTTAAAATGGTTA GTCGACATTAAGATTTATAGTGAACAGCTTGAAAATAATATTGATGATAGCAGCTACTTCTCTGATAACAGTTGTCGCAT TATTGTTTGCAGTTTGTACCTACTGGCAACGATCTATAAAAAGCCTCTGCCAGATAAAGCCAGTCTTTTTTATAAAAAAG ACTGGCTTTGCCGAATGATGATTAAAACCTGTTTACAGGGACTAGACAATCCTGCTTATGTTAATTCAGGAACTTTTGCC ATTAAGCGCCATCTATTCGAAATTTTCGCCTTTAAAAGCTCTAAATACAAATTGGCCATGCTGTTATGTAAGTTGCACCC CTCTATTTTAGATTATTCAAGTGTTAATTCTTTATCGCCTAGATGGTTGTTCCTAATCTATCCTCTACGTCCATTTTTAG CCTTTAAACGTAAATTTTTATAA
Upstream 100 bases:
>100_bases CTAGAGACGTTAACCCCTTTACTAGTTAAATTAAGGGTACCCTTAAATCACATTCAGTTTTATTTTGTTCAATATCAGAT AAGGTTGTAAAGGCAGTGAA
Downstream 100 bases:
>100_bases ATTATGAAAATAACGCTAAGTTTTAAACTAATACGGATGGATTGGCTTAAGTTGCTATTGATACCTCTACTTTTGAGTGT TTTAGCTGTTTTTATAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MNYNKNISIELQTVAWLSLPQLSIDEVYATASLLKKVNFDRLQTLIIQHRTHPCIYNNIRQHFIEQVPSKLLFYLKNQYV KNKKRNTTQLGIYAELNYLFHEENIPIHFFKGLSLSKLIYCDIALRNNNDIDVLISKSDLGQANSILNSMGFYAHEFEAL DDEWRNEYFKVHKDIGYTNQEGLLIELHLELSIPIIDEISIYQNKLQYRDKLFQTDLSVDELFYLCWHGSHTLFHRLKWL VDIKIYSEQLENNIDDSSYFSDNSCRIIVCSLYLLATIYKKPLPDKASLFYKKDWLCRMMIKTCLQGLDNPAYVNSGTFA IKRHLFEIFAFKSSKYKLAMLLCKLHPSILDYSSVNSLSPRWLFLIYPLRPFLAFKRKFL
Sequences:
>Translated_380_residues MNYNKNISIELQTVAWLSLPQLSIDEVYATASLLKKVNFDRLQTLIIQHRTHPCIYNNIRQHFIEQVPSKLLFYLKNQYV KNKKRNTTQLGIYAELNYLFHEENIPIHFFKGLSLSKLIYCDIALRNNNDIDVLISKSDLGQANSILNSMGFYAHEFEAL DDEWRNEYFKVHKDIGYTNQEGLLIELHLELSIPIIDEISIYQNKLQYRDKLFQTDLSVDELFYLCWHGSHTLFHRLKWL VDIKIYSEQLENNIDDSSYFSDNSCRIIVCSLYLLATIYKKPLPDKASLFYKKDWLCRMMIKTCLQGLDNPAYVNSGTFA IKRHLFEIFAFKSSKYKLAMLLCKLHPSILDYSSVNSLSPRWLFLIYPLRPFLAFKRKFL >Mature_380_residues MNYNKNISIELQTVAWLSLPQLSIDEVYATASLLKKVNFDRLQTLIIQHRTHPCIYNNIRQHFIEQVPSKLLFYLKNQYV KNKKRNTTQLGIYAELNYLFHEENIPIHFFKGLSLSKLIYCDIALRNNNDIDVLISKSDLGQANSILNSMGFYAHEFEAL DDEWRNEYFKVHKDIGYTNQEGLLIELHLELSIPIIDEISIYQNKLQYRDKLFQTDLSVDELFYLCWHGSHTLFHRLKWL VDIKIYSEQLENNIDDSSYFSDNSCRIIVCSLYLLATIYKKPLPDKASLFYKKDWLCRMMIKTCLQGLDNPAYVNSGTFA IKRHLFEIFAFKSSKYKLAMLLCKLHPSILDYSSVNSLSPRWLFLIYPLRPFLAFKRKFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44883; Mature: 44883
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYNKNISIELQTVAWLSLPQLSIDEVYATASLLKKVNFDRLQTLIIQHRTHPCIYNNIR CCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH QHFIEQVPSKLLFYLKNQYVKNKKRNTTQLGIYAELNYLFHEENIPIHFFKGLSLSKLIY HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCEEEECCCCCCEEEE CDIALRNNNDIDVLISKSDLGQANSILNSMGFYAHEFEALDDEWRNEYFKVHKDIGYTNQ EEEEEECCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC EGLLIELHLELSIPIIDEISIYQNKLQYRDKLFQTDLSVDELFYLCWHGSHTLFHRLKWL CCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCHHHHHHHHHH VDIKIYSEQLENNIDDSSYFSDNSCRIIVCSLYLLATIYKKPLPDKASLFYKKDWLCRMM HHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH IKTCLQGLDNPAYVNSGTFAIKRHLFEIFAFKSSKYKLAMLLCKLHPSILDYSSVNSLSP HHHHHHCCCCCCEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHCCCCCCCCCC RWLFLIYPLRPFLAFKRKFL CEEEEEECHHHHHHHHHHCC >Mature Secondary Structure MNYNKNISIELQTVAWLSLPQLSIDEVYATASLLKKVNFDRLQTLIIQHRTHPCIYNNIR CCCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHH QHFIEQVPSKLLFYLKNQYVKNKKRNTTQLGIYAELNYLFHEENIPIHFFKGLSLSKLIY HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCEEEECCCCCCEEEE CDIALRNNNDIDVLISKSDLGQANSILNSMGFYAHEFEALDDEWRNEYFKVHKDIGYTNQ EEEEEECCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC EGLLIELHLELSIPIIDEISIYQNKLQYRDKLFQTDLSVDELFYLCWHGSHTLFHRLKWL CCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCHHHHHHHHHH VDIKIYSEQLENNIDDSSYFSDNSCRIIVCSLYLLATIYKKPLPDKASLFYKKDWLCRMM HHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH IKTCLQGLDNPAYVNSGTFAIKRHLFEIFAFKSSKYKLAMLLCKLHPSILDYSSVNSLSP HHHHHHCCCCCCEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHCCCCCCCCCC RWLFLIYPLRPFLAFKRKFL CEEEEEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA