| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is eamA [H]
Identifier: 119946282
GI number: 119946282
Start: 3246831
End: 3247727
Strand: Direct
Name: eamA [H]
Synonym: Ping_2647
Alternate gene names: 119946282
Gene position: 3246831-3247727 (Clockwise)
Preceding gene: 119946281
Following gene: 119946283
Centisome position: 71.21
GC content: 42.14
Gene sequence:
>897_bases ATGAGTCAACGTGACTTGCTTATAGCGTTATCAGTGATGGCTATTTGGGGATTAAATTTTTCTGTTATTAAGCTTGGTGT TGGCGAAGCCGATCCGGTACTTGTTACTGCGCTGCGTTTTACATTTGCCACTATCCCTGCAATATTTTTTGTTAAACGTC CCAATGTAAAATGGACTTATTTACTCAGTTACGGTTTGGTTTTTACGATTGGCGTTTGGGGCATGGCGACATGGTCAATG GATGCTGGTCTGTCTGCAGGTATGGCTTCTGTGCTATTGCAGTTGAATGTATTCATTGCTGTTATTCTCGGTTATCTGTT CCTTAACGAACCCCTGTCGCGAGCAAAAATGAGTGGCGGTGTACTGGCCATTTGTGGCTTAGCACTCAGTTTATCGGTAA CAGATGGGACCGTAAGCTTAGCGGGTGTGTTACTTATTTTACTCGCTGCATTATGTTGGAGTATTGCCAGTATCATCATC AAAAAGGCTGCGACAAAAGAGGTTTTTGCATTTACTGTTTGGGCAATGCTTTATGCGCTTTTGCCGCTGTATATACTTGC TTTTTATCACAGTGGTGCAGAACAATTTCAACACACCCTACAAACTTGGAATAGTTCGCTGGCATTTTCTGTTTTGTTTC AAGCTTATCCAGTGACTTTATTGGGCTATTGGATTTGGAATAGAATTTTGTCTACACACCCGTTATCAACGGTCGCCCCC CTTACTCTATTAGTACCTATATTTGGCTTATTGGGCGCGTTTCTGTTCTATCAAGAACAAGTTGAGAGCACTAAAATCAT CGCCTGTTTACTGATTATTTCAGGCTTAATGGTCGGCTTAATCCGCCCTGAAGTATGGTCAACCCTTCGCCTTCAAGTTA ATGTCTTACGCAGATAA
Upstream 100 bases:
>100_bases GCTCGAGACTCGAAGCCCAACACTCGATGCTCGAAGCCCGACGCTCGACACTGGAATACAAAACGACCACTTGGCTCGAT TATTTTAAGGAAAGAGATAT
Downstream 100 bases:
>100_bases AAAACTATCACAACAAAGAGCAAGTCTTGCGTTTTGCCTTTTATACCCCTTCCCCTCATTAGGTGATCTATTTAGGCGTC GGAAAAATGCATAAAAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSQRDLLIALSVMAIWGLNFSVIKLGVGEADPVLVTALRFTFATIPAIFFVKRPNVKWTYLLSYGLVFTIGVWGMATWSM DAGLSAGMASVLLQLNVFIAVILGYLFLNEPLSRAKMSGGVLAICGLALSLSVTDGTVSLAGVLLILLAALCWSIASIII KKAATKEVFAFTVWAMLYALLPLYILAFYHSGAEQFQHTLQTWNSSLAFSVLFQAYPVTLLGYWIWNRILSTHPLSTVAP LTLLVPIFGLLGAFLFYQEQVESTKIIACLLIISGLMVGLIRPEVWSTLRLQVNVLRR
Sequences:
>Translated_298_residues MSQRDLLIALSVMAIWGLNFSVIKLGVGEADPVLVTALRFTFATIPAIFFVKRPNVKWTYLLSYGLVFTIGVWGMATWSM DAGLSAGMASVLLQLNVFIAVILGYLFLNEPLSRAKMSGGVLAICGLALSLSVTDGTVSLAGVLLILLAALCWSIASIII KKAATKEVFAFTVWAMLYALLPLYILAFYHSGAEQFQHTLQTWNSSLAFSVLFQAYPVTLLGYWIWNRILSTHPLSTVAP LTLLVPIFGLLGAFLFYQEQVESTKIIACLLIISGLMVGLIRPEVWSTLRLQVNVLRR >Mature_297_residues SQRDLLIALSVMAIWGLNFSVIKLGVGEADPVLVTALRFTFATIPAIFFVKRPNVKWTYLLSYGLVFTIGVWGMATWSMD AGLSAGMASVLLQLNVFIAVILGYLFLNEPLSRAKMSGGVLAICGLALSLSVTDGTVSLAGVLLILLAALCWSIASIIIK KAATKEVFAFTVWAMLYALLPLYILAFYHSGAEQFQHTLQTWNSSLAFSVLFQAYPVTLLGYWIWNRILSTHPLSTVAPL TLLVPIFGLLGAFLFYQEQVESTKIIACLLIISGLMVGLIRPEVWSTLRLQVNVLRR
Specific function: May be an export pump for cysteine and other metabolites of the cysteine pathway (such as N-acetyl-L-serine (NAS) and O- acetyl-L-serine (OAS)), and for other amino acids and their metabolites [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
Organism=Escherichia coli, GI87081929, Length=284, Percent_Identity=33.0985915492958, Blast_Score=152, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 32713; Mature: 32581
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRDLLIALSVMAIWGLNFSVIKLGVGEADPVLVTALRFTFATIPAIFFVKRPNVKWTY CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEH LLSYGLVFTIGVWGMATWSMDAGLSAGMASVLLQLNVFIAVILGYLFLNEPLSRAKMSGG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC VLAICGLALSLSVTDGTVSLAGVLLILLAALCWSIASIIIKKAATKEVFAFTVWAMLYAL HHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPLYILAFYHSGAEQFQHTLQTWNSSLAFSVLFQAYPVTLLGYWIWNRILSTHPLSTVAP HHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LTLLVPIFGLLGAFLFYQEQVESTKIIACLLIISGLMVGLIRPEVWSTLRLQVNVLRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC >Mature Secondary Structure SQRDLLIALSVMAIWGLNFSVIKLGVGEADPVLVTALRFTFATIPAIFFVKRPNVKWTY CCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEH LLSYGLVFTIGVWGMATWSMDAGLSAGMASVLLQLNVFIAVILGYLFLNEPLSRAKMSGG HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC VLAICGLALSLSVTDGTVSLAGVLLILLAALCWSIASIIIKKAATKEVFAFTVWAMLYAL HHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPLYILAFYHSGAEQFQHTLQTWNSSLAFSVLFQAYPVTLLGYWIWNRILSTHPLSTVAP HHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LTLLVPIFGLLGAFLFYQEQVESTKIIACLLIISGLMVGLIRPEVWSTLRLQVNVLRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8383113; 9097039; 9278503; 10844694 [H]