| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946280
Identifier: 119946280
GI number: 119946280
Start: 3244286
End: 3245995
Strand: Direct
Name: 119946280
Synonym: Ping_2645
Alternate gene names: NA
Gene position: 3244286-3245995 (Clockwise)
Preceding gene: 119946273
Following gene: 119946281
Centisome position: 71.15
GC content: 39.53
Gene sequence:
>1710_bases ATGTTATCTGTAGATAAATTGGTTGATGAAAATTACCCAAGGTTAAAACCTAAATCCTGGCTAAGTAATACTATTAAGGC CCTTTTAAGACGTCTATTACATGAACGCGCATTTTTGCAGTTTTCTGAAGATTACCCCCACCTTAAAGGTTTTGATTTTG TCGAGCAAAGCTTAGAGAGTTTTAAATTTACTTACTCATTACAGTCTAACGAGATCGAGCGGATCCCTAAAACGGGCCGT GTTGTTATTATCGCTAACCACCCTATCGGTTCACTTGATGGATTGGCTTTATTAAATATGGTGGGTAAAATCAGACCTGA CGTTAAAGTGATGGCGAACCAGCTGCTTTATAACGTAAAACCCATACAATCCCTGTTACTGCCCGTCAATAACATGTCAG GAAACACCGATAGACATCAGCTAAAAGCGTTAACTCAATACCTTAAAGCCGAAGGCGCTATTATTGTTTTTCCTTCTGGA GAGGTGTCCAGAATGAAAGTAAATGGCATACAAGATCCGCAATGGCATAGCGGTTTTTTAAAGTTAGCGCTCAATACCAA ATCTCCCATTATTCCGATTCATATTGACGGAAAAAATTCAGCGCTATTTTATGGTGCATCGATGATCTATAAACCTTTAT CAACTTTACTGCTGGTTAGTGAAATGTTTAAACAAAAGTGCAGCTCAATCAAAATTCGAATAGGAGAAGCCATACCCTAT TCAAATTACTCTGATATGAAGCTGTCACTGCCCTGCAAAGTTAAATTATTTAACCGGCATTTGTACAGTTTGCCTAAAAA CAAAACAGGTATTTTTAAAACAGAAACCGCCATTGCTCATCCCGTCGATCGGCAAATATTAGCCAAGGCGTTAAAGTCCT GTGAATTGTTAGGCACAACACCTGATAACAAAAAAATTATGTTGTTTGAAGGCCCATTAGATTCGCCCATTATGCGTGAG ATTGGGAGACTTCGAGAATATACTTTTAGAGCGGTAGGCGAAGGTTCGGGTTATAAACGCGATATTGATCCCTACGATAG CCATTACCAACACCTGATCCTATGGGATAGTGAAGATTTGGAAATAGCAGGTGCATATCGCCTTGCCGATACTAAACATA TTATTGATAAGCATGGATTATCAGGGCTTTATTGCAGCAGCTTGTTTATTTTTAATGACAGTATGAATGAGTATCTTGAG CACGGTTTAGAGTTAGGGCGTGCCTTTGTGCAACCTAAATACTGGGGAAAACGCTCTTTGGACTATTTATGGCATGGGAT TGGCGCCTATCTGACGCGCTATCCACATTGCCGTTACTTGTTTGGCCCGGTCTCAATCAGCAATGAGATGCCTCAATTGG CTAAAGATCTGATGATCTATTTTTATCAAATGCATTTTCATAAAAAAACCTTAGCGACATCTCATCATCCATATCAATTT TCAGATTTAGCGCCATTAGTCAGTGCATTTAAGGGAGAGTGTTACGAAGGTGATTTTCGAACCCTTAAAGATCTGCTCAG CAATATAGGCTGCTCAGTGCCCACTTTGTACAAACAATACTCTGAATTAACCGATCCCGGGGGTGTACACTTTTTAGACT TTGGCGTAGATCCAGACTTTCATTCTTGCGTTGATGGTCTGGTATTAATAGACAGCAGAATGATCAAAGCGCATAAACGT AAACGTTATATGCCTGACTTATCTCAATAA
Upstream 100 bases:
>100_bases GTAAAATCAGGCGATAAGTCATCGATGTTTTTTTCAATGCAATATCACTGTCATATAGAGTGGGTAAATTGATAACAAAT TAATCGAATGAAGTGCTTAT
Downstream 100 bases:
>100_bases ACAGCAATATCGGTTTTCTTTGATATAGGCAACAATTATTCTGCCCCTTTAGTGCAAAATAATATCAGGCCGCCCTCGCG GTAAGGATCTGCAAAACAGA
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: Hemolysin; Acyltransferase Domain Protein; Acyltransferase Family Protein; Acyltransferase Domain-Containing Protein; Acyltransferase; Hemolysin A; Phosphate Acyltransferase Family Protein; Acyltransferase Protein; Phospholipid/Glycerol Acyltransferase Hemolysin; DNA Polymerase III Subunit Alpha; Sulfolipid Biosynthesis Protein SqdA; Acetyltransferase
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MLSVDKLVDENYPRLKPKSWLSNTIKALLRRLLHERAFLQFSEDYPHLKGFDFVEQSLESFKFTYSLQSNEIERIPKTGR VVIIANHPIGSLDGLALLNMVGKIRPDVKVMANQLLYNVKPIQSLLLPVNNMSGNTDRHQLKALTQYLKAEGAIIVFPSG EVSRMKVNGIQDPQWHSGFLKLALNTKSPIIPIHIDGKNSALFYGASMIYKPLSTLLLVSEMFKQKCSSIKIRIGEAIPY SNYSDMKLSLPCKVKLFNRHLYSLPKNKTGIFKTETAIAHPVDRQILAKALKSCELLGTTPDNKKIMLFEGPLDSPIMRE IGRLREYTFRAVGEGSGYKRDIDPYDSHYQHLILWDSEDLEIAGAYRLADTKHIIDKHGLSGLYCSSLFIFNDSMNEYLE HGLELGRAFVQPKYWGKRSLDYLWHGIGAYLTRYPHCRYLFGPVSISNEMPQLAKDLMIYFYQMHFHKKTLATSHHPYQF SDLAPLVSAFKGECYEGDFRTLKDLLSNIGCSVPTLYKQYSELTDPGGVHFLDFGVDPDFHSCVDGLVLIDSRMIKAHKR KRYMPDLSQ
Sequences:
>Translated_569_residues MLSVDKLVDENYPRLKPKSWLSNTIKALLRRLLHERAFLQFSEDYPHLKGFDFVEQSLESFKFTYSLQSNEIERIPKTGR VVIIANHPIGSLDGLALLNMVGKIRPDVKVMANQLLYNVKPIQSLLLPVNNMSGNTDRHQLKALTQYLKAEGAIIVFPSG EVSRMKVNGIQDPQWHSGFLKLALNTKSPIIPIHIDGKNSALFYGASMIYKPLSTLLLVSEMFKQKCSSIKIRIGEAIPY SNYSDMKLSLPCKVKLFNRHLYSLPKNKTGIFKTETAIAHPVDRQILAKALKSCELLGTTPDNKKIMLFEGPLDSPIMRE IGRLREYTFRAVGEGSGYKRDIDPYDSHYQHLILWDSEDLEIAGAYRLADTKHIIDKHGLSGLYCSSLFIFNDSMNEYLE HGLELGRAFVQPKYWGKRSLDYLWHGIGAYLTRYPHCRYLFGPVSISNEMPQLAKDLMIYFYQMHFHKKTLATSHHPYQF SDLAPLVSAFKGECYEGDFRTLKDLLSNIGCSVPTLYKQYSELTDPGGVHFLDFGVDPDFHSCVDGLVLIDSRMIKAHKR KRYMPDLSQ >Mature_569_residues MLSVDKLVDENYPRLKPKSWLSNTIKALLRRLLHERAFLQFSEDYPHLKGFDFVEQSLESFKFTYSLQSNEIERIPKTGR VVIIANHPIGSLDGLALLNMVGKIRPDVKVMANQLLYNVKPIQSLLLPVNNMSGNTDRHQLKALTQYLKAEGAIIVFPSG EVSRMKVNGIQDPQWHSGFLKLALNTKSPIIPIHIDGKNSALFYGASMIYKPLSTLLLVSEMFKQKCSSIKIRIGEAIPY SNYSDMKLSLPCKVKLFNRHLYSLPKNKTGIFKTETAIAHPVDRQILAKALKSCELLGTTPDNKKIMLFEGPLDSPIMRE IGRLREYTFRAVGEGSGYKRDIDPYDSHYQHLILWDSEDLEIAGAYRLADTKHIIDKHGLSGLYCSSLFIFNDSMNEYLE HGLELGRAFVQPKYWGKRSLDYLWHGIGAYLTRYPHCRYLFGPVSISNEMPQLAKDLMIYFYQMHFHKKTLATSHHPYQF SDLAPLVSAFKGECYEGDFRTLKDLLSNIGCSVPTLYKQYSELTDPGGVHFLDFGVDPDFHSCVDGLVLIDSRMIKAHKR KRYMPDLSQ
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64945; Mature: 64945
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSVDKLVDENYPRLKPKSWLSNTIKALLRRLLHERAFLQFSEDYPHLKGFDFVEQSLES CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH FKFTYSLQSNEIERIPKTGRVVIIANHPIGSLDGLALLNMVGKIRPDVKVMANQLLYNVK EEEEEEECCCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH PIQSLLLPVNNMSGNTDRHQLKALTQYLKAEGAIIVFPSGEVSRMKVNGIQDPQWHSGFL HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCCEE KLALNTKSPIIPIHIDGKNSALFYGASMIYKPLSTLLLVSEMFKQKCSSIKIRIGEAIPY EEEECCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCC SNYSDMKLSLPCKVKLFNRHLYSLPKNKTGIFKTETAIAHPVDRQILAKALKSCELLGTT CCCCCEEEECCEEEEHHHHHHHHCCCCCCCCEEECHHHCCCCCHHHHHHHHHCCEEECCC PDNKKIMLFEGPLDSPIMREIGRLREYTFRAVGEGSGYKRDIDPYDSHYQHLILWDSEDL CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCC EIAGAYRLADTKHIIDKHGLSGLYCSSLFIFNDSMNEYLEHGLELGRAFVQPKYWGKRSL EEEEEEEECCHHHHHHHCCCCCEECCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCH DYLWHGIGAYLTRYPHCRYLFGPVSISNEMPQLAKDLMIYFYQMHFHKKTLATSHHPYQF HHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH SDLAPLVSAFKGECYEGDFRTLKDLLSNIGCSVPTLYKQYSELTDPGGVHFLDFGVDPDF HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCH HSCVDGLVLIDSRMIKAHKRKRYMPDLSQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLSVDKLVDENYPRLKPKSWLSNTIKALLRRLLHERAFLQFSEDYPHLKGFDFVEQSLES CCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH FKFTYSLQSNEIERIPKTGRVVIIANHPIGSLDGLALLNMVGKIRPDVKVMANQLLYNVK EEEEEEECCCHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH PIQSLLLPVNNMSGNTDRHQLKALTQYLKAEGAIIVFPSGEVSRMKVNGIQDPQWHSGFL HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCCCCCCCCCCEE KLALNTKSPIIPIHIDGKNSALFYGASMIYKPLSTLLLVSEMFKQKCSSIKIRIGEAIPY EEEECCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCC SNYSDMKLSLPCKVKLFNRHLYSLPKNKTGIFKTETAIAHPVDRQILAKALKSCELLGTT CCCCCEEEECCEEEEHHHHHHHHCCCCCCCCEEECHHHCCCCCHHHHHHHHHCCEEECCC PDNKKIMLFEGPLDSPIMREIGRLREYTFRAVGEGSGYKRDIDPYDSHYQHLILWDSEDL CCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCC EIAGAYRLADTKHIIDKHGLSGLYCSSLFIFNDSMNEYLEHGLELGRAFVQPKYWGKRSL EEEEEEEECCHHHHHHHCCCCCEECCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCH DYLWHGIGAYLTRYPHCRYLFGPVSISNEMPQLAKDLMIYFYQMHFHKKTLATSHHPYQF HHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH SDLAPLVSAFKGECYEGDFRTLKDLLSNIGCSVPTLYKQYSELTDPGGVHFLDFGVDPDF HHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCH HSCVDGLVLIDSRMIKAHKRKRYMPDLSQ HHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA