| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is recX [H]
Identifier: 119946266
GI number: 119946266
Start: 3225018
End: 3225680
Strand: Direct
Name: recX [H]
Synonym: Ping_2629
Alternate gene names: 119946266
Gene position: 3225018-3225680 (Clockwise)
Preceding gene: 119946263
Following gene: 119946267
Centisome position: 70.73
GC content: 40.12
Gene sequence:
>663_bases ATGTCATTTAATAACCCGATAAAACCGGCAAAAGATATTGACGGAGTACGCAGATCTGCCTTTTGGCATTTAGGGCGGCG TGACCACAGTGAAAAAGAGCTGCGTGAAAAAATTGCGCGTAAAACTGACAATCAGCAATGGATTGATACGGTGATAAGCG AATGTTTTGAGTATGGTTATTTAGATGATGCGCGCTTTGTAGATAATTTTATTCGCTCCTCACAAAATAAAGGCTTTGGA AGCACGCGCATTAAACGTGATTTACAGCGTAAAGGCATCGACGTAAGTCACCTTGATCAGGTGTTTGAAGATGATCCCCA TGATTATATCCCCGATGCCCTCACCCTGCTGTCACTAAAATATAAGCAGCGTATTGCCAACCAATACTTAAAACAAAAGG CGATGCTTTTCCTGCAAAGCAAGGGCCATCATTTCGATGATATATTCAAGGCAATCGATCAACATAATGAAGCATATCCT GTTGATGATTGTGATTATTTGAGTGAGGCAGTGGTACTGTTATCACGTAAATTTAAAACAGCCATTATCGAACGCAAGCT GCATGATAAGGCAATGCGCTTGTTAATCTCAAGAGGAAATTCGTTTAACAATGCGCTCGATGCAATCAAAGCCTTTAATG ATGATATGGATAAAGAAGAATAA
Upstream 100 bases:
>100_bases CACATAAATATTCCTCGGTGTCTTTTCTGAAAAGAGAACTTGAGAACTCCGACTTTCCCGCTATCATAGACAATGCTCAT TCATCTGCAAACAGGAAAAC
Downstream 100 bases:
>100_bases ATATTCAGCTTTGAGCCTTCGAGCGGCGAGTAACGGCTGACGGCTGACGGCTATCAGCTGACGGCTATCGGCTTGGAGCC TTACAGCTTTAAACCCTTTC
Product: transcriptional regulator for RecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSFNNPIKPAKDIDGVRRSAFWHLGRRDHSEKELREKIARKTDNQQWIDTVISECFEYGYLDDARFVDNFIRSSQNKGFG STRIKRDLQRKGIDVSHLDQVFEDDPHDYIPDALTLLSLKYKQRIANQYLKQKAMLFLQSKGHHFDDIFKAIDQHNEAYP VDDCDYLSEAVVLLSRKFKTAIIERKLHDKAMRLLISRGNSFNNALDAIKAFNDDMDKEE
Sequences:
>Translated_220_residues MSFNNPIKPAKDIDGVRRSAFWHLGRRDHSEKELREKIARKTDNQQWIDTVISECFEYGYLDDARFVDNFIRSSQNKGFG STRIKRDLQRKGIDVSHLDQVFEDDPHDYIPDALTLLSLKYKQRIANQYLKQKAMLFLQSKGHHFDDIFKAIDQHNEAYP VDDCDYLSEAVVLLSRKFKTAIIERKLHDKAMRLLISRGNSFNNALDAIKAFNDDMDKEE >Mature_219_residues SFNNPIKPAKDIDGVRRSAFWHLGRRDHSEKELREKIARKTDNQQWIDTVISECFEYGYLDDARFVDNFIRSSQNKGFGS TRIKRDLQRKGIDVSHLDQVFEDDPHDYIPDALTLLSLKYKQRIANQYLKQKAMLFLQSKGHHFDDIFKAIDQHNEAYPV DDCDYLSEAVVLLSRKFKTAIIERKLHDKAMRLLISRGNSFNNALDAIKAFNDDMDKEE
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
Organism=Escherichia coli, GI1789050, Length=136, Percent_Identity=35.2941176470588, Blast_Score=73, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 25772; Mature: 25641
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNNPIKPAKDIDGVRRSAFWHLGRRDHSEKELREKIARKTDNQQWIDTVISECFEYGY CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC LDDARFVDNFIRSSQNKGFGSTRIKRDLQRKGIDVSHLDQVFEDDPHDYIPDALTLLSLK CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH YKQRIANQYLKQKAMLFLQSKGHHFDDIFKAIDQHNEAYPVDDCDYLSEAVVLLSRKFKT HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH AIIERKLHDKAMRLLISRGNSFNNALDAIKAFNDDMDKEE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SFNNPIKPAKDIDGVRRSAFWHLGRRDHSEKELREKIARKTDNQQWIDTVISECFEYGY CCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC LDDARFVDNFIRSSQNKGFGSTRIKRDLQRKGIDVSHLDQVFEDDPHDYIPDALTLLSLK CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH YKQRIANQYLKQKAMLFLQSKGHHFDDIFKAIDQHNEAYPVDDCDYLSEAVVLLSRKFKT HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH AIIERKLHDKAMRLLISRGNSFNNALDAIKAFNDDMDKEE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA