| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946231
Identifier: 119946231
GI number: 119946231
Start: 3179507
End: 3181618
Strand: Reverse
Name: 119946231
Synonym: Ping_2592
Alternate gene names: NA
Gene position: 3181618-3179507 (Counterclockwise)
Preceding gene: 119946232
Following gene: 119946224
Centisome position: 69.78
GC content: 38.87
Gene sequence:
>2112_bases ATGACTATAAAACAATTAAAAACACCCTTACTGACTGGCACATCAGTTGCGCAGAAACGAGCTGAATTAAAGCAGTATTA TGCTAATACAGTTCATACTTATGAGTCACTGTTCAGCTTAATCAATAATGATGATGCTTATTATTTAAGACCCGAACCGT TACGCCACCCGTTAATTTTTTACTTTGGGCACACAGCGACTTTTTACGTCAATAAGTTAATGTTAGGTAAATTTATAGAT AAACGCATCAATCAAAAGCTTGAAGCTATTTGCGCAGTAGGTGTTGATGAAATGAGTTGGGATGATCTTAATGGTACGCA TTATGATTGGCCTAAGGTTGATGAGATTATTGAATATCGGCGCCAAGTTTTTGCACTGGTTAATGACCTAATCGATAATA TGGAGATTAGTTTACCCATTTGTAAAGGCTCTTTAGCCTGGGTTATGTTAATGGGTTGCGAGCATGAGCGCATTCATTTA GAAACTTCCTCGGTTATCATGAGAATGTTACCTGTTAAGGATTTGACATCCAATCAAGACTGGTTGGCTTGTACTTCAGC TGGCGCTGCCCCTGAAAACACATTACTTGCTGTTGAGGGCAAAGCACTTACCTTGGGCAGAGCAGATGACCATCAAACTT ATGGTTGGGATAACGAATACGGGCAGACAAAAGTGCAGGTTGAACCTTTTAAAGCCTCAAAGTTTGTAGTCTCAAATGGA GAGTTTATTGAATTTATAGAAGCGGGTGGTTATCAAAACAAAAGCTATTGGAGTGAGGAAGGGCAACAATGGCTGGCATT TAAACAGGCTAAGATGCCAAGATTCTGGTCGGAAATAAATAATCAATATTGGCAGCGTAATTTATTAAATGAAATTCCAT TACCTTTGAATTGGCCGGTTGAAGTAAATTATTTAGAAGCCAAAGCCTTTTGCAACTGGAAAAATAGCAGCAGTGAACAT TACATTCGTATGCCAACTGAAGCAGAATGGTACTGTTTACGAGATATGGTAGACAGCGACCTTACTAATTGGCGGCAAGC GCCAGGTAATATTAATTTAGAATACTTTGCATCGTCATCACCCGTTGATCAATTTTCAGAAAATGATTTTTTTGATTTAT TGGGTAATGTCTGGCAGTGGACAGAATCTGCAATCGACGGTTTTGAAGGATTTCAGGTTGATCCGCTTTATGATGATTTT TCAACACCTACCTTTGACGGTCAGCATAATCTTATTAAGGGGGGATCATGGATCTCAACGGGTAATGAAGCAATTAAACA CGCCCGTTATGCTTTTCGTCGTCATTTCTTTCAACATGCAGGATTTCGTTATATTGAATCAGTCTCAGAAACCATTCCAA CCATACCGGTAAACCAATATGTAACAGATAAAAAAATCTGTACTGAATTGGAGGCGCATTTTGGTGATAATTATCTAGGA TTGGGCAATTATTCCGTCACTCTGGCGAGGTATGTCCTTAAGCAGTTAAACAATTTTTCAATAGCGAAAGGAAAGTTGCT TGATTTGGGATGCAGCGTAGGACGTTGTAGTTTTGAGTTATCTCCTTATTTTGAAGCGGTTGACAGTGTTGATTTCTCTG CTCAGTCTATACCTTACTCAGTGCAGTTACAGCAGGGGAAAACCGTTCGTTATGAGCTTGAAAAAGAAGGTGAGCTGGTT GACTTTAAAGAGATTAATTTGAATTCTGCTGGGTTAAATGCAAACTACCGGAACATTCACTTTAAACAAGGCGATCCGAG CAACTTAAAAGCGTCATTTGATGACTATGATGTAATTATTGCCCAGCAGGTGCTTGAGCAAAATTATGATCCTCTGCAGT TTTTACGTACTATTTCAGGCTCTTTAAAGGAAGGGGGGATTTTAATACTGGCATCTGCCTATGATTTTAACCCGGAAATT AAACCTGAAAAAAGATTTTCTGGTAAGAAAGTAAATGGTGAAAACTTTACTGGTTTTGATGCCGTTCAACAGGCCTTGTC TGCTCAGTTTTCGTTAGTTGCCAGTGAGAACATAGCAAAGCCATCACGTCATTGCGCACGTAAATTTACGGTCACCAATC AACATATTACCCTATGGAAAAAGTTAGTTTAA
Upstream 100 bases:
>100_bases GCATGATGGTTCTGGTAAGGCATTAAAAGCCGAAATTATTAAAAACTATCAGCAGGATATATTTTCTGGTAATTCATTGT AGATATTAAGCGACTGACAG
Downstream 100 bases:
>100_bases TCTAGGATCTGTTGAGATAAGAAGAGCTTACCTGCTAAAAAATATTAACCCCAGCCAAGTAAACTTGCCTGGGGTTAATA TAACAACAGCAGAAAGAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 703; Mature: 702
Protein sequence:
>703_residues MTIKQLKTPLLTGTSVAQKRAELKQYYANTVHTYESLFSLINNDDAYYLRPEPLRHPLIFYFGHTATFYVNKLMLGKFID KRINQKLEAICAVGVDEMSWDDLNGTHYDWPKVDEIIEYRRQVFALVNDLIDNMEISLPICKGSLAWVMLMGCEHERIHL ETSSVIMRMLPVKDLTSNQDWLACTSAGAAPENTLLAVEGKALTLGRADDHQTYGWDNEYGQTKVQVEPFKASKFVVSNG EFIEFIEAGGYQNKSYWSEEGQQWLAFKQAKMPRFWSEINNQYWQRNLLNEIPLPLNWPVEVNYLEAKAFCNWKNSSSEH YIRMPTEAEWYCLRDMVDSDLTNWRQAPGNINLEYFASSSPVDQFSENDFFDLLGNVWQWTESAIDGFEGFQVDPLYDDF STPTFDGQHNLIKGGSWISTGNEAIKHARYAFRRHFFQHAGFRYIESVSETIPTIPVNQYVTDKKICTELEAHFGDNYLG LGNYSVTLARYVLKQLNNFSIAKGKLLDLGCSVGRCSFELSPYFEAVDSVDFSAQSIPYSVQLQQGKTVRYELEKEGELV DFKEINLNSAGLNANYRNIHFKQGDPSNLKASFDDYDVIIAQQVLEQNYDPLQFLRTISGSLKEGGILILASAYDFNPEI KPEKRFSGKKVNGENFTGFDAVQQALSAQFSLVASENIAKPSRHCARKFTVTNQHITLWKKLV
Sequences:
>Translated_703_residues MTIKQLKTPLLTGTSVAQKRAELKQYYANTVHTYESLFSLINNDDAYYLRPEPLRHPLIFYFGHTATFYVNKLMLGKFID KRINQKLEAICAVGVDEMSWDDLNGTHYDWPKVDEIIEYRRQVFALVNDLIDNMEISLPICKGSLAWVMLMGCEHERIHL ETSSVIMRMLPVKDLTSNQDWLACTSAGAAPENTLLAVEGKALTLGRADDHQTYGWDNEYGQTKVQVEPFKASKFVVSNG EFIEFIEAGGYQNKSYWSEEGQQWLAFKQAKMPRFWSEINNQYWQRNLLNEIPLPLNWPVEVNYLEAKAFCNWKNSSSEH YIRMPTEAEWYCLRDMVDSDLTNWRQAPGNINLEYFASSSPVDQFSENDFFDLLGNVWQWTESAIDGFEGFQVDPLYDDF STPTFDGQHNLIKGGSWISTGNEAIKHARYAFRRHFFQHAGFRYIESVSETIPTIPVNQYVTDKKICTELEAHFGDNYLG LGNYSVTLARYVLKQLNNFSIAKGKLLDLGCSVGRCSFELSPYFEAVDSVDFSAQSIPYSVQLQQGKTVRYELEKEGELV DFKEINLNSAGLNANYRNIHFKQGDPSNLKASFDDYDVIIAQQVLEQNYDPLQFLRTISGSLKEGGILILASAYDFNPEI KPEKRFSGKKVNGENFTGFDAVQQALSAQFSLVASENIAKPSRHCARKFTVTNQHITLWKKLV >Mature_702_residues TIKQLKTPLLTGTSVAQKRAELKQYYANTVHTYESLFSLINNDDAYYLRPEPLRHPLIFYFGHTATFYVNKLMLGKFIDK RINQKLEAICAVGVDEMSWDDLNGTHYDWPKVDEIIEYRRQVFALVNDLIDNMEISLPICKGSLAWVMLMGCEHERIHLE TSSVIMRMLPVKDLTSNQDWLACTSAGAAPENTLLAVEGKALTLGRADDHQTYGWDNEYGQTKVQVEPFKASKFVVSNGE FIEFIEAGGYQNKSYWSEEGQQWLAFKQAKMPRFWSEINNQYWQRNLLNEIPLPLNWPVEVNYLEAKAFCNWKNSSSEHY IRMPTEAEWYCLRDMVDSDLTNWRQAPGNINLEYFASSSPVDQFSENDFFDLLGNVWQWTESAIDGFEGFQVDPLYDDFS TPTFDGQHNLIKGGSWISTGNEAIKHARYAFRRHFFQHAGFRYIESVSETIPTIPVNQYVTDKKICTELEAHFGDNYLGL GNYSVTLARYVLKQLNNFSIAKGKLLDLGCSVGRCSFELSPYFEAVDSVDFSAQSIPYSVQLQQGKTVRYELEKEGELVD FKEINLNSAGLNANYRNIHFKQGDPSNLKASFDDYDVIIAQQVLEQNYDPLQFLRTISGSLKEGGILILASAYDFNPEIK PEKRFSGKKVNGENFTGFDAVQQALSAQFSLVASENIAKPSRHCARKFTVTNQHITLWKKLV
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80479; Mature: 80348
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00019 ACTININ_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKQLKTPLLTGTSVAQKRAELKQYYANTVHTYESLFSLINNDDAYYLRPEPLRHPLIF CCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEE YFGHTATFYVNKLMLGKFIDKRINQKLEAICAVGVDEMSWDDLNGTHYDWPKVDEIIEYR EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH RQVFALVNDLIDNMEISLPICKGSLAWVMLMGCEHERIHLETSSVIMRMLPVKDLTSNQD HHHHHHHHHHHCCCEEEEEEECCCEEEHEEECCCCCEEEEEHHHHHHHHHCCHHCCCCCC WLACTSAGAAPENTLLAVEGKALTLGRADDHQTYGWDNEYGQTKVQVEPFKASKFVVSNG EEEEECCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCC EFIEFIEAGGYQNKSYWSEEGQQWLAFKQAKMPRFWSEINNQYWQRNLLNEIPLPLNWPV CEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCE EVNYLEAKAFCNWKNSSSEHYIRMPTEAEWYCLRDMVDSDLTNWRQAPGNINLEYFASSS EEEEEEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC PVDQFSENDFFDLLGNVWQWTESAIDGFEGFQVDPLYDDFSTPTFDGQHNLIKGGSWIST CHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEECC GNEAIKHARYAFRRHFFQHAGFRYIESVSETIPTIPVNQYVTDKKICTELEAHFGDNYLG CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEE LGNYSVTLARYVLKQLNNFSIAKGKLLDLGCSVGRCSFELSPYFEAVDSVDFSAQSIPYS CCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEECCHHHHHHHCCCCCCCCCCEE VQLQQGKTVRYELEKEGELVDFKEINLNSAGLNANYRNIHFKQGDPSNLKASFDDYDVII EEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHH AQQVLEQNYDPLQFLRTISGSLKEGGILILASAYDFNPEIKPEKRFSGKKVNGENFTGFD HHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHH AVQQALSAQFSLVASENIAKPSRHCARKFTVTNQHITLWKKLV HHHHHHHHHHEEEECCCCCCHHHHHHHHEEECCCHHHHHHHCC >Mature Secondary Structure TIKQLKTPLLTGTSVAQKRAELKQYYANTVHTYESLFSLINNDDAYYLRPEPLRHPLIF CHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEE YFGHTATFYVNKLMLGKFIDKRINQKLEAICAVGVDEMSWDDLNGTHYDWPKVDEIIEYR EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH RQVFALVNDLIDNMEISLPICKGSLAWVMLMGCEHERIHLETSSVIMRMLPVKDLTSNQD HHHHHHHHHHHCCCEEEEEEECCCEEEHEEECCCCCEEEEEHHHHHHHHHCCHHCCCCCC WLACTSAGAAPENTLLAVEGKALTLGRADDHQTYGWDNEYGQTKVQVEPFKASKFVVSNG EEEEECCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCC EFIEFIEAGGYQNKSYWSEEGQQWLAFKQAKMPRFWSEINNQYWQRNLLNEIPLPLNWPV CEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCE EVNYLEAKAFCNWKNSSSEHYIRMPTEAEWYCLRDMVDSDLTNWRQAPGNINLEYFASSS EEEEEEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC PVDQFSENDFFDLLGNVWQWTESAIDGFEGFQVDPLYDDFSTPTFDGQHNLIKGGSWIST CHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEECC GNEAIKHARYAFRRHFFQHAGFRYIESVSETIPTIPVNQYVTDKKICTELEAHFGDNYLG CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEE LGNYSVTLARYVLKQLNNFSIAKGKLLDLGCSVGRCSFELSPYFEAVDSVDFSAQSIPYS CCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCEEEECCHHHHHHHCCCCCCCCCCEE VQLQQGKTVRYELEKEGELVDFKEINLNSAGLNANYRNIHFKQGDPSNLKASFDDYDVII EEECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHH AQQVLEQNYDPLQFLRTISGSLKEGGILILASAYDFNPEIKPEKRFSGKKVNGENFTGFD HHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHH AVQQALSAQFSLVASENIAKPSRHCARKFTVTNQHITLWKKLV HHHHHHHHHHEEEECCCCCCHHHHHHHHEEECCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA