| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119946201
Identifier: 119946201
GI number: 119946201
Start: 3135332
End: 3136396
Strand: Reverse
Name: 119946201
Synonym: Ping_2561
Alternate gene names: NA
Gene position: 3136396-3135332 (Counterclockwise)
Preceding gene: 119946207
Following gene: 119946200
Centisome position: 68.79
GC content: 38.59
Gene sequence:
>1065_bases ATGATATGGAATAGTTTAGGTATGACTGGAGAACTTGAAAAACTCAAAATGTATATCGAGTCATCTATCATTGATGAGCG AAACCATATCTTCAAGTACACCTCCCCTTTGACACATCCTCAATCTTCTCAAGCTAAGGCTGTTTTTCTTGAATACGATA GAGCCACTAGCAATGACAGATACCATAATTACAACCTCAAGTCGTTACCATATGGTAATTTCCAAGTAGAAGAGAAAGAT ATACCTAGTTTCTATGTGTTTCTAGCGAAGAAGCTCAGATATCACTTCACCCAAGATAGGAAATCATATGCGAGTGATAG GATATTAAATCCTTTCAAAGTCTACGGTGAAGAGGGGTCTGTTGAAGAGATAGGAATCCCAGACTATGAGTTTAGTGGTG AAACTGACCATGGGGTTTTTAGCTCGTGGTTGTTATTTGACCATCTATTTGAAGTTGGAGAGCAGATCGCAAGAAGAATC GAAGCTAAGAATTTTATCGGTATCCAAAGTCATTTGAATCTTATTGACGATAACTTTGGCTTTCTTATGGGTCGTAAAAA TTCATACTTTCAGCTAAAAATGGACGAAGATGAGCTATACAGTTGGCTCTTGGTTGAGATTGAATCTTTCAAGCATCAGG TTGAAGAAAAAGGACTTTGGAAGAGTTTGAACAAAGAGCCAGAGAAGCACTTTCAAAAAGTATTCGCTGCTGTTCTTGGT CGAGTCAGTGAACTATTTGGCGTTGATATGTCAGCAGAGACATGCGTTGGTAGCGGAACGGTTGATTTTAAGTTCTCTCA AGGCAGCAATTCGAAAGTCTGCGTCGAGCTTAAACGATCTAACAGCTCAAAGGCACTTGAAGGCTACACAAAGCAGCTTC AGCAGTACCTAATGAGTGAAAAAATAGACAAAGGTATATATGTCGTTATTGACTCTGGTGATTCGAAAAGCTCATACCGT CAGTTGCTTCATTTCATTGAAAACGGTAAGAAACAAGGTGAAAATTATCCTGATATTATACTGATGGATGCGAGTCCAAA AATTAGTGCTAGTAAACAGATATAG
Upstream 100 bases:
>100_bases TTATTAAAATATTGTCAATATTTAAATAATTTAAACTGATTTTTTTATTTTTAGATTGTTAACTTATTGAAAATAATATG TATAATCAAGAAATAATTAA
Downstream 100 bases:
>100_bases CTTGCATGTATACAGAGGCATTGCTTGGTGCTTTTCCATTTTTTTGGTAAGGAAAACGCCAAGCAGGATGCTTTTGCTGT AACACTTTTGGGGTAAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MIWNSLGMTGELEKLKMYIESSIIDERNHIFKYTSPLTHPQSSQAKAVFLEYDRATSNDRYHNYNLKSLPYGNFQVEEKD IPSFYVFLAKKLRYHFTQDRKSYASDRILNPFKVYGEEGSVEEIGIPDYEFSGETDHGVFSSWLLFDHLFEVGEQIARRI EAKNFIGIQSHLNLIDDNFGFLMGRKNSYFQLKMDEDELYSWLLVEIESFKHQVEEKGLWKSLNKEPEKHFQKVFAAVLG RVSELFGVDMSAETCVGSGTVDFKFSQGSNSKVCVELKRSNSSKALEGYTKQLQQYLMSEKIDKGIYVVIDSGDSKSSYR QLLHFIENGKKQGENYPDIILMDASPKISASKQI
Sequences:
>Translated_354_residues MIWNSLGMTGELEKLKMYIESSIIDERNHIFKYTSPLTHPQSSQAKAVFLEYDRATSNDRYHNYNLKSLPYGNFQVEEKD IPSFYVFLAKKLRYHFTQDRKSYASDRILNPFKVYGEEGSVEEIGIPDYEFSGETDHGVFSSWLLFDHLFEVGEQIARRI EAKNFIGIQSHLNLIDDNFGFLMGRKNSYFQLKMDEDELYSWLLVEIESFKHQVEEKGLWKSLNKEPEKHFQKVFAAVLG RVSELFGVDMSAETCVGSGTVDFKFSQGSNSKVCVELKRSNSSKALEGYTKQLQQYLMSEKIDKGIYVVIDSGDSKSSYR QLLHFIENGKKQGENYPDIILMDASPKISASKQI >Mature_354_residues MIWNSLGMTGELEKLKMYIESSIIDERNHIFKYTSPLTHPQSSQAKAVFLEYDRATSNDRYHNYNLKSLPYGNFQVEEKD IPSFYVFLAKKLRYHFTQDRKSYASDRILNPFKVYGEEGSVEEIGIPDYEFSGETDHGVFSSWLLFDHLFEVGEQIARRI EAKNFIGIQSHLNLIDDNFGFLMGRKNSYFQLKMDEDELYSWLLVEIESFKHQVEEKGLWKSLNKEPEKHFQKVFAAVLG RVSELFGVDMSAETCVGSGTVDFKFSQGSNSKVCVELKRSNSSKALEGYTKQLQQYLMSEKIDKGIYVVIDSGDSKSSYR QLLHFIENGKKQGENYPDIILMDASPKISASKQI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40830; Mature: 40830
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWNSLGMTGELEKLKMYIESSIIDERNHIFKYTSPLTHPQSSQAKAVFLEYDRATSNDR CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCC YHNYNLKSLPYGNFQVEEKDIPSFYVFLAKKLRYHFTQDRKSYASDRILNPFKVYGEEGS EECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCC VEEIGIPDYEFSGETDHGVFSSWLLFDHLFEVGEQIARRIEAKNFIGIQSHLNLIDDNFG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHCCCCC FLMGRKNSYFQLKMDEDELYSWLLVEIESFKHQVEEKGLWKSLNKEPEKHFQKVFAAVLG EEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RVSELFGVDMSAETCVGSGTVDFKFSQGSNSKVCVELKRSNSSKALEGYTKQLQQYLMSE HHHHHHCCCCCHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH KIDKGIYVVIDSGDSKSSYRQLLHFIENGKKQGENYPDIILMDASPKISASKQI HCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC >Mature Secondary Structure MIWNSLGMTGELEKLKMYIESSIIDERNHIFKYTSPLTHPQSSQAKAVFLEYDRATSNDR CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEECCCCCCCC YHNYNLKSLPYGNFQVEEKDIPSFYVFLAKKLRYHFTQDRKSYASDRILNPFKVYGEEGS EECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEECCCCC VEEIGIPDYEFSGETDHGVFSSWLLFDHLFEVGEQIARRIEAKNFIGIQSHLNLIDDNFG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHCCCCC FLMGRKNSYFQLKMDEDELYSWLLVEIESFKHQVEEKGLWKSLNKEPEKHFQKVFAAVLG EEEECCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RVSELFGVDMSAETCVGSGTVDFKFSQGSNSKVCVELKRSNSSKALEGYTKQLQQYLMSE HHHHHHCCCCCHHHCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH KIDKGIYVVIDSGDSKSSYRQLLHFIENGKKQGENYPDIILMDASPKISASKQI HCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA