| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119946200
Identifier: 119946200
GI number: 119946200
Start: 3132569
End: 3133792
Strand: Reverse
Name: 119946200
Synonym: Ping_2560
Alternate gene names: NA
Gene position: 3133792-3132569 (Counterclockwise)
Preceding gene: 119946201
Following gene: 119946198
Centisome position: 68.73
GC content: 49.92
Gene sequence:
>1224_bases ATGAAAAATATATTATTAAAAACCTGCTTAACCGCTTTGGCTTTGTCCGTTGCTGGTTTAGCAAATGCAGGTGGCACAAT TACTGATGCTCAATTGCGCTCGTATTCTGCAATATCGAAAGCTGCGGTGAATATAGCCGCCCAACCCGAATTGTCGACTG CTCCCAATGTTGGCGGTCATCTCGCTGCACAAGCGGCCGTTGTTATCGGTGCCAATACTACTGTAAATGATATTTATGCT GGCGCTGCGGTTACCACCGGTGCTGGGTCAAAAGTTAACCAAATCAAAGCTGGCGCAGCCGCGGGCATTGGGGCGAATGC CACCGCTGGGGACGTCAATGCAGGTGCTGCCGTGGTAGTTGGCGCTGTTGCTAATGTCGGCGATATCATAGCTGGCGCTG CCATCACGTTGGGCGCCAATGCGACGGCGTACTCTACCAATGACACGGTAGTCACCTATGGTGCGGGTTCTACGGATAAC GCTACGGGGAATGATTACATCGATCAAGGATTTATCAAAGGTCCCGCTGAGATGACAGCTGCGATGATGGCCATTACCAA TAAGTTCCATGCTAATCCAGTTGATGTCAACAAGGTCGAAACATATACGGGCCTGTCGGGTCTCACTATTGGCGTTGAGG GCGGGGAGACGACGGAATATTACAGTGCGATCAACCTGCAGGCTAATACCACACTGACCATAGAAGGGAACGTGACGGTC ATTACCAGTGGGGCGATAACCCTGGGCGCCGGGGCAGAAATATTGCTGGGAAATGGTGCGAATGTTACCTGGATATTGGG CGGTGCGCTCAATCTTGGGGCCGGGTCTAAGTTTAGGGGCGAAACGTATGTGAATGGCGCGGTAAATGGCGCCACGAGCG ATGTCGTATGTGGGAATTTATACGCTACGGGGGCGATAAGTGTCTCTACCATTGGTGATGCCTGTTTAATACCAGTTGCT CCGGCGACATGCCCGTTTTGGAGTGTGGCGGATTTAATTAACGTATCCCCAAATTTCAACTCTCGCAATTTTACGGATTA TGTAATGATTGTTGATTTGGATGCTGACACTAGGTTTGAGATAATTTACGACTCAGGCGGTAACCGCGGTGTTGTACGTT CCTCCCCCGCCGGCATTCGTATTGAACGCTTTAGTATGGATTCGGTGGAATATGACGTATGTGAAAGTACATTAAGAGAT GAAATAAATAGCCGGTTACCCTGA
Upstream 100 bases:
>100_bases CACTTCACGTAATGAGTGTTGATTAATTGGAGGTCCTTACCTCACAAATACAGTCACCTCATGATGGGGTATCTCACATT ATATTAAATGGAAGTAAATA
Downstream 100 bases:
>100_bases TTTTAGGTATTAACATCAACCCGCAATTTGACCATGCAGGATGGTACGTCCCATGTTTTTGTGGGGTAACCCATGCTGCA ATGCCAGCCTTGACTTATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 407; Mature: 407
Protein sequence:
>407_residues MKNILLKTCLTALALSVAGLANAGGTITDAQLRSYSAISKAAVNIAAQPELSTAPNVGGHLAAQAAVVIGANTTVNDIYA GAAVTTGAGSKVNQIKAGAAAGIGANATAGDVNAGAAVVVGAVANVGDIIAGAAITLGANATAYSTNDTVVTYGAGSTDN ATGNDYIDQGFIKGPAEMTAAMMAITNKFHANPVDVNKVETYTGLSGLTIGVEGGETTEYYSAINLQANTTLTIEGNVTV ITSGAITLGAGAEILLGNGANVTWILGGALNLGAGSKFRGETYVNGAVNGATSDVVCGNLYATGAISVSTIGDACLIPVA PATCPFWSVADLINVSPNFNSRNFTDYVMIVDLDADTRFEIIYDSGGNRGVVRSSPAGIRIERFSMDSVEYDVCESTLRD EINSRLP
Sequences:
>Translated_407_residues MKNILLKTCLTALALSVAGLANAGGTITDAQLRSYSAISKAAVNIAAQPELSTAPNVGGHLAAQAAVVIGANTTVNDIYA GAAVTTGAGSKVNQIKAGAAAGIGANATAGDVNAGAAVVVGAVANVGDIIAGAAITLGANATAYSTNDTVVTYGAGSTDN ATGNDYIDQGFIKGPAEMTAAMMAITNKFHANPVDVNKVETYTGLSGLTIGVEGGETTEYYSAINLQANTTLTIEGNVTV ITSGAITLGAGAEILLGNGANVTWILGGALNLGAGSKFRGETYVNGAVNGATSDVVCGNLYATGAISVSTIGDACLIPVA PATCPFWSVADLINVSPNFNSRNFTDYVMIVDLDADTRFEIIYDSGGNRGVVRSSPAGIRIERFSMDSVEYDVCESTLRD EINSRLP >Mature_407_residues MKNILLKTCLTALALSVAGLANAGGTITDAQLRSYSAISKAAVNIAAQPELSTAPNVGGHLAAQAAVVIGANTTVNDIYA GAAVTTGAGSKVNQIKAGAAAGIGANATAGDVNAGAAVVVGAVANVGDIIAGAAITLGANATAYSTNDTVVTYGAGSTDN ATGNDYIDQGFIKGPAEMTAAMMAITNKFHANPVDVNKVETYTGLSGLTIGVEGGETTEYYSAINLQANTTLTIEGNVTV ITSGAITLGAGAEILLGNGANVTWILGGALNLGAGSKFRGETYVNGAVNGATSDVVCGNLYATGAISVSTIGDACLIPVA PATCPFWSVADLINVSPNFNSRNFTDYVMIVDLDADTRFEIIYDSGGNRGVVRSSPAGIRIERFSMDSVEYDVCESTLRD EINSRLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41008; Mature: 41008
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNILLKTCLTALALSVAGLANAGGTITDAQLRSYSAISKAAVNIAAQPELSTAPNVGGH CCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC LAAQAAVVIGANTTVNDIYAGAAVTTGAGSKVNQIKAGAAAGIGANATAGDVNAGAAVVV CEEEEEEEEECCCCHHHEECCCEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEE GAVANVGDIIAGAAITLGANATAYSTNDTVVTYGAGSTDNATGNDYIDQGFIKGPAEMTA EHHHHHHHHHHCCEEEECCCCEEEECCCCEEEECCCCCCCCCCCCHHCCCCCCCHHHHHH AMMAITNKFHANPVDVNKVETYTGLSGLTIGVEGGETTEYYSAINLQANTTLTIEGNVTV HHHHHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEEEEEEECEEEEEECCEEE ITSGAITLGAGAEILLGNGANVTWILGGALNLGAGSKFRGETYVNGAVNGATSDVVCGNL EECCCEEECCCCEEEEECCCEEEEEEECEEECCCCCCCCCCEEECCCCCCCCCCEEECCE YATGAISVSTIGDACLIPVAPATCPFWSVADLINVSPNFNSRNFTDYVMIVDLDADTRFE EECCEEEEEECCCEEEEECCCCCCCCHHHHHHEECCCCCCCCCCEEEEEEEEECCCCEEE IIYDSGGNRGVVRSSPAGIRIERFSMDSVEYDVCESTLRDEINSRLP EEEECCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNILLKTCLTALALSVAGLANAGGTITDAQLRSYSAISKAAVNIAAQPELSTAPNVGGH CCCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCC LAAQAAVVIGANTTVNDIYAGAAVTTGAGSKVNQIKAGAAAGIGANATAGDVNAGAAVVV CEEEEEEEEECCCCHHHEECCCEEECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEE GAVANVGDIIAGAAITLGANATAYSTNDTVVTYGAGSTDNATGNDYIDQGFIKGPAEMTA EHHHHHHHHHHCCEEEECCCCEEEECCCCEEEECCCCCCCCCCCCHHCCCCCCCHHHHHH AMMAITNKFHANPVDVNKVETYTGLSGLTIGVEGGETTEYYSAINLQANTTLTIEGNVTV HHHHHHHHCCCCCCCCCCEEEECCCCEEEEEECCCCCCEEEEEEEEEECEEEEEECCEEE ITSGAITLGAGAEILLGNGANVTWILGGALNLGAGSKFRGETYVNGAVNGATSDVVCGNL EECCCEEECCCCEEEEECCCEEEEEEECEEECCCCCCCCCCEEECCCCCCCCCCEEECCE YATGAISVSTIGDACLIPVAPATCPFWSVADLINVSPNFNSRNFTDYVMIVDLDADTRFE EECCEEEEEECCCEEEEECCCCCCCCHHHHHHEECCCCCCCCCCEEEEEEEEECCCCEEE IIYDSGGNRGVVRSSPAGIRIERFSMDSVEYDVCESTLRDEINSRLP EEEECCCCCCEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA